RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 CLEC18AA5D8T8 446 aa17.17■□□□□ 0.34
SNRPA1-202ENST00000394082 MTSS1O43312 755 aa17.17■□□□□ 0.34
SNRPA1-202ENST00000394082 NDUFA10O95299 355 aa17.17■□□□□ 0.34
SNRPA1-202ENST00000394082 MT-CYBP00156 380 aaPredicted RBP17.17■□□□□ 0.34
SNRPA1-202ENST00000394082 ZNF28P17035 718 aa17.17■□□□□ 0.34
SNRPA1-202ENST00000394082 NELFEP18615 380 aaKnown RBP17.17■□□□□ 0.34
SNRPA1-202ENST00000394082 F8A1P23610 371 aa17.17■□□□□ 0.34
SNRPA1-202ENST00000394082 DLSTP36957 453 aa17.17■□□□□ 0.34
SNRPA1-202ENST00000394082 HALP42357 657 aa17.17■□□□□ 0.34
SNRPA1-202ENST00000394082 LEPRP48357 1165 aaKnown RBP17.17■□□□□ 0.34
SNRPA1-202ENST00000394082 GTF2H3Q13889 308 aa17.17■□□□□ 0.34
SNRPA1-202ENST00000394082 GPR18Q14330 331 aa17.17■□□□□ 0.34
SNRPA1-202ENST00000394082 PCSK7Q16549 785 aa17.17■□□□□ 0.34
SNRPA1-202ENST00000394082 TAZQ16635 292 aa17.17■□□□□ 0.34
SNRPA1-202ENST00000394082 ATP13A5Q4VNC0 1218 aa17.17■□□□□ 0.34
SNRPA1-202ENST00000394082 KHDC1Q4VXA5 237 aaKnown RBP17.17■□□□□ 0.34
SNRPA1-202ENST00000394082 TCTN3Q6NUS6 607 aa17.17■□□□□ 0.34
SNRPA1-202ENST00000394082 KLHL35Q6PF15 583 aa17.17■□□□□ 0.34
SNRPA1-202ENST00000394082 CLEC18BQ6UXF7 455 aa17.17■□□□□ 0.34
SNRPA1-202ENST00000394082 PPP1R3BQ86XI6 285 aa17.17■□□□□ 0.34
SNRPA1-202ENST00000394082 RHOT1Q8IXI2 618 aa17.17■□□□□ 0.34
SNRPA1-202ENST00000394082 CLEC18CQ8NCF0 446 aa17.17■□□□□ 0.34
SNRPA1-202ENST00000394082 SPATA22Q8NHS9 363 aa17.17■□□□□ 0.34
SNRPA1-202ENST00000394082 SEC14L1Q92503 715 aa17.17■□□□□ 0.34
SNRPA1-202ENST00000394082 UBXN4Q92575 508 aa17.17■□□□□ 0.34
SNRPA1-202ENST00000394082 CXorf40BQ96DE9 158 aa17.17■□□□□ 0.34
SNRPA1-202ENST00000394082 STAMBPL1Q96FJ0 436 aa17.17■□□□□ 0.34
SNRPA1-202ENST00000394082 ANP32EQ9BTT0 268 aa17.17■□□□□ 0.34
SNRPA1-202ENST00000394082 ZCCHC2Q9C0B9 1178 aaKnown RBP17.17■□□□□ 0.34
SNRPA1-202ENST00000394082 ZNHIT6Q9NWK9 470 aaKnown RBP17.17■□□□□ 0.34
SNRPA1-202ENST00000394082 HACD3Q9P035 362 aa17.17■□□□□ 0.34
SNRPA1-202ENST00000394082 FAM153AQ9UHL3 310 aa17.17■□□□□ 0.34
SNRPA1-202ENST00000394082 CROTQ9UKG9 612 aa17.17■□□□□ 0.34
SNRPA1-202ENST00000394082 DNAJC16Q9Y2G8 782 aa17.17■□□□□ 0.34
SNRPA1-202ENST00000394082 SPO11Q9Y5K1 396 aa17.17■□□□□ 0.34
SNRPA1-202ENST00000394082 KLHL33A6NCF5 533 aa17.16■□□□□ 0.34
SNRPA1-202ENST00000394082 OR52A4PA6NMU1 304 aa17.16■□□□□ 0.34
SNRPA1-202ENST00000394082 C21orf140B9A014 251 aa17.16■□□□□ 0.34
SNRPA1-202ENST00000394082 AURKAO14965 403 aa17.16■□□□□ 0.34
SNRPA1-202ENST00000394082 AKR1B10O60218 316 aa17.16■□□□□ 0.34
SNRPA1-202ENST00000394082 MTX2O75431 263 aa17.16■□□□□ 0.34
SNRPA1-202ENST00000394082 SPAG6O75602 509 aa17.16■□□□□ 0.34
SNRPA1-202ENST00000394082 RASSF9O75901 435 aa17.16■□□□□ 0.34
SNRPA1-202ENST00000394082 CCNYL3P0C7X3 344 aa17.16■□□□□ 0.34
SNRPA1-202ENST00000394082 FECHP22830 423 aa17.16■□□□□ 0.34
SNRPA1-202ENST00000394082 PTPN3P26045 913 aa17.16■□□□□ 0.34
SNRPA1-202ENST00000394082 RPL10P27635 214 aaKnown RBP17.16■□□□□ 0.34
SNRPA1-202ENST00000394082 SH3BP2P78314 561 aa17.16■□□□□ 0.34
SNRPA1-202ENST00000394082 KLRB1Q12918 225 aa17.16■□□□□ 0.34
SNRPA1-202ENST00000394082 TFDP2Q14188 446 aa17.16■□□□□ 0.34
SNRPA1-202ENST00000394082 PLA2G4EQ3MJ16 856 aa17.16■□□□□ 0.34
SNRPA1-202ENST00000394082 ODF2Q5BJF6 829 aa17.16■□□□□ 0.34
SNRPA1-202ENST00000394082 CACHD1Q5VU97 1274 aa17.16■□□□□ 0.34
SNRPA1-202ENST00000394082 AMZ2Q86W34 360 aa17.16■□□□□ 0.34
SNRPA1-202ENST00000394082 KMT5CQ86Y97 462 aa17.16■□□□□ 0.34
SNRPA1-202ENST00000394082 TRAPPC5Q8IUR0 188 aa17.16■□□□□ 0.34
SNRPA1-202ENST00000394082 RASGRP3Q8IV61 690 aa17.16■□□□□ 0.34
SNRPA1-202ENST00000394082 RSC1A1Q92681 617 aa17.16■□□□□ 0.34
SNRPA1-202ENST00000394082 SLC41A2Q96JW4 573 aa17.16■□□□□ 0.34
SNRPA1-202ENST00000394082 TTC25Q96NG3 672 aa17.16■□□□□ 0.34
SNRPA1-202ENST00000394082 VAT1Q99536 393 aa17.16■□□□□ 0.34
SNRPA1-202ENST00000394082 IL26Q9NPH9 171 aa17.16■□□□□ 0.34
SNRPA1-202ENST00000394082 ZNF71Q9NQZ8 489 aaPredicted RBP17.16■□□□□ 0.34
SNRPA1-202ENST00000394082 PADI1Q9ULC6 663 aa17.16■□□□□ 0.34
SNRPA1-202ENST00000394082 INTUQ9ULD6 942 aa17.16■□□□□ 0.34
SNRPA1-202ENST00000394082 POLHQ9Y253 713 aa17.16■□□□□ 0.34
SNRPA1-202ENST00000394082 MKRN2OSH3BPM6 223 aa17.15■□□□□ 0.34
SNRPA1-202ENST00000394082 PMPCBO75439 489 aa17.15■□□□□ 0.34
SNRPA1-202ENST00000394082 KIAA0754O94854 1291 aa17.15■□□□□ 0.34
SNRPA1-202ENST00000394082 SLC4A1P02730 911 aa17.15■□□□□ 0.34
SNRPA1-202ENST00000394082 SEPHS1P49903 392 aa17.15■□□□□ 0.34
SNRPA1-202ENST00000394082 UBAP2LQ14157 1087 aaKnown RBP17.15■□□□□ 0.34
SNRPA1-202ENST00000394082 SEPT7Q16181 437 aaKnown RBP17.15■□□□□ 0.34
SNRPA1-202ENST00000394082 LDLRAP1Q5SW96 308 aa17.15■□□□□ 0.34
SNRPA1-202ENST00000394082 C16orf46Q6P387 395 aa17.15■□□□□ 0.34
SNRPA1-202ENST00000394082 KDELC1Q6UW63 502 aa17.15■□□□□ 0.34
SNRPA1-202ENST00000394082 NPNTQ6UXI9 565 aa17.15■□□□□ 0.34
SNRPA1-202ENST00000394082 RFX6Q8HWS3 928 aa17.15■□□□□ 0.34
SNRPA1-202ENST00000394082 APLFQ8IW19 511 aaPredicted RBP17.15■□□□□ 0.34
SNRPA1-202ENST00000394082 TTC30BQ8N4P2 665 aa17.15■□□□□ 0.34
SNRPA1-202ENST00000394082 GALNT6Q8NCL4 622 aa17.15■□□□□ 0.34
SNRPA1-202ENST00000394082 DDHD1Q8NEL9 900 aa17.15■□□□□ 0.34
SNRPA1-202ENST00000394082 TFB1MQ8WVM0 346 aaKnown RBP17.15■□□□□ 0.34
SNRPA1-202ENST00000394082 ZFPM2Q8WW38 1151 aa17.15■□□□□ 0.34
SNRPA1-202ENST00000394082 ZNF514Q96K75 400 aaPredicted RBP17.15■□□□□ 0.34
SNRPA1-202ENST00000394082 CD180Q99467 661 aa17.15■□□□□ 0.34
SNRPA1-202ENST00000394082 PDE7BQ9NP56 450 aa17.15■□□□□ 0.34
SNRPA1-202ENST00000394082 SMOXQ9NWM0 555 aa17.15■□□□□ 0.34
SNRPA1-202ENST00000394082 IL17CQ9P0M4 197 aa17.15■□□□□ 0.34
SNRPA1-202ENST00000394082 WDR37Q9Y2I8 494 aa17.15■□□□□ 0.34
SNRPA1-202ENST00000394082 MRPS18BQ9Y676 258 aaKnown RBP17.15■□□□□ 0.34
SNRPA1-202ENST00000394082 LRRK2Q5S007 2527 aa17.15■□□□□ 0.34
SNRPA1-202ENST00000394082 SPENQ96T58 3664 aaKnown RBP17.15■□□□□ 0.34
SNRPA1-202ENST00000394082 KIF1CO43896 1103 aaKnown RBP17.14■□□□□ 0.33
SNRPA1-202ENST00000394082 CREG1O75629 220 aa17.14■□□□□ 0.33
SNRPA1-202ENST00000394082 KRT1P04264 644 aa17.14■□□□□ 0.33
SNRPA1-202ENST00000394082 CD68P34810 354 aaPredicted RBP17.14■□□□□ 0.33
SNRPA1-202ENST00000394082 SPAM1P38567 509 aa17.14■□□□□ 0.33
SNRPA1-202ENST00000394082 CDKN2BP42772 138 aa17.14■□□□□ 0.33
SNRPA1-202ENST00000394082 TNNT3P45378 269 aaPredicted RBP17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms