RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 ADORA2AP29274 412 aa14.62□□□□□ -0.07
CCDC50-201ENST00000392455 MATKP42679 507 aa14.62□□□□□ -0.07
CCDC50-201ENST00000392455 FOLH1Q04609 750 aa14.62□□□□□ -0.07
CCDC50-201ENST00000392455 INAVAQ3KP66 663 aa14.62□□□□□ -0.07
CCDC50-201ENST00000392455 Q8N402 240 aa14.62□□□□□ -0.07
CCDC50-201ENST00000392455 MED31Q9Y3C7 131 aa14.62□□□□□ -0.07
CCDC50-201ENST00000392455 RIMS1Q86UR5 1692 aaKnown RBP14.61□□□□□ -0.07
CCDC50-201ENST00000392455 HDAC3O15379 428 aa14.61□□□□□ -0.07
CCDC50-201ENST00000392455 KDM4BO94953 1096 aa14.61□□□□□ -0.07
CCDC50-201ENST00000392455 VAPBO95292 243 aa14.61□□□□□ -0.07
CCDC50-201ENST00000392455 YBX3P16989 372 aaKnown RBP eCLIP14.61□□□□□ -0.074e-7■□□□□ 10.3
CCDC50-201ENST00000392455 BDNFP23560 247 aa14.61□□□□□ -0.07
CCDC50-201ENST00000392455 IL12BP29460 328 aa14.61□□□□□ -0.07
CCDC50-201ENST00000392455 PPM1AP35813 382 aa14.61□□□□□ -0.07
CCDC50-201ENST00000392455 XKR4Q5GH76 650 aa14.61□□□□□ -0.07
CCDC50-201ENST00000392455 KXD1Q9BQD3 176 aa14.61□□□□□ -0.07
CCDC50-201ENST00000392455 RHBGQ9H310 441 aa14.61□□□□□ -0.07
CCDC50-201ENST00000392455 CCSER2Q9H7U1 834 aa14.61□□□□□ -0.07
CCDC50-201ENST00000392455 KBTBD4Q9NVX7 518 aa14.61□□□□□ -0.07
CCDC50-201ENST00000392455 CPS1P31327 1500 aa14.61□□□□□ -0.07
CCDC50-201ENST00000392455 A0A0A0MRY4 1105 aa14.61□□□□□ -0.07
CCDC50-201ENST00000392455 ARPC4-TTLL3A0A0A6YYG9 625 aa14.61□□□□□ -0.07
CCDC50-201ENST00000392455 SLC22A1O15245 554 aa14.61□□□□□ -0.07
CCDC50-201ENST00000392455 KERAO60938 352 aa14.61□□□□□ -0.07
CCDC50-201ENST00000392455 ASLP04424 464 aa14.61□□□□□ -0.07
CCDC50-201ENST00000392455 GNAO1P09471 354 aa14.61□□□□□ -0.07
CCDC50-201ENST00000392455 SLC20A2Q08357 652 aa14.61□□□□□ -0.07
CCDC50-201ENST00000392455 ADAM15Q13444 863 aa14.61□□□□□ -0.07
CCDC50-201ENST00000392455 FBXO25Q8TCJ0 367 aa14.61□□□□□ -0.07
CCDC50-201ENST00000392455 SPATA13Q96N96 652 aa14.61□□□□□ -0.07
CCDC50-201ENST00000392455 ANPEPP15144 967 aa14.61□□□□□ -0.07
CCDC50-201ENST00000392455 DDX6P26196 483 aaKnown RBP eCLIP14.61□□□□□ -0.07
CCDC50-201ENST00000392455 PGDP52209 483 aa14.61□□□□□ -0.07
CCDC50-201ENST00000392455 GBX2P52951 348 aaPredicted RBP14.61□□□□□ -0.07
CCDC50-201ENST00000392455 NFE2L1Q14494 772 aa14.61□□□□□ -0.07
CCDC50-201ENST00000392455 C15orf59Q2T9L4 293 aaPredicted RBP14.61□□□□□ -0.07
CCDC50-201ENST00000392455 ARHGAP12Q8IWW6 846 aa14.61□□□□□ -0.07
CCDC50-201ENST00000392455 SLC2A14Q8TDB8 520 aa14.61□□□□□ -0.07
CCDC50-201ENST00000392455 TKTL2Q9H0I9 626 aa14.61□□□□□ -0.07
CCDC50-201ENST00000392455 L2HGDHQ9H9P8 463 aa14.61□□□□□ -0.07
CCDC50-201ENST00000392455 EML1O00423 815 aa14.61□□□□□ -0.07
CCDC50-201ENST00000392455 ADH1CP00326 375 aa14.61□□□□□ -0.07
CCDC50-201ENST00000392455 UROSP10746 265 aa14.61□□□□□ -0.07
CCDC50-201ENST00000392455 ZNF14P17017 642 aaPredicted RBP14.61□□□□□ -0.07
CCDC50-201ENST00000392455 ATP5C1P36542 298 aaKnown RBP14.61□□□□□ -0.07
CCDC50-201ENST00000392455 SLC27A1Q6PCB7 646 aa14.61□□□□□ -0.07
CCDC50-201ENST00000392455 CFAP206Q8IYR0 622 aa14.61□□□□□ -0.07
CCDC50-201ENST00000392455 POPDC2Q9HBU9 364 aa14.61□□□□□ -0.07
CCDC50-201ENST00000392455 SCAF4O95104 1147 aaKnown RBP14.61□□□□□ -0.07
CCDC50-201ENST00000392455 NTRK1P04629 796 aa14.61□□□□□ -0.07
CCDC50-201ENST00000392455 RPLP0P05388 317 aaKnown RBP14.61□□□□□ -0.07
CCDC50-201ENST00000392455 ALDH5A1P51649 535 aaPredicted RBP14.61□□□□□ -0.07
CCDC50-201ENST00000392455 DUSP4Q13115 394 aa14.61□□□□□ -0.07
CCDC50-201ENST00000392455 CBX2Q14781 532 aaPredicted RBP14.61□□□□□ -0.07
CCDC50-201ENST00000392455 CXorf57Q6NSI4 855 aaKnown RBP14.61□□□□□ -0.07
CCDC50-201ENST00000392455 SSX6Q7RTT6 188 aa14.61□□□□□ -0.07
CCDC50-201ENST00000392455 SPATA20Q8TB22 786 aa14.61□□□□□ -0.07
CCDC50-201ENST00000392455 PCDHB9Q9Y5E1 797 aa14.61□□□□□ -0.07
CCDC50-201ENST00000392455 CD247P20963 164 aa14.61□□□□□ -0.07
CCDC50-201ENST00000392455 UGT2B10P36537 528 aa14.61□□□□□ -0.07
CCDC50-201ENST00000392455 MTHFRP42898 656 aa14.61□□□□□ -0.07
CCDC50-201ENST00000392455 RFX5P48382 616 aaPredicted RBP14.61□□□□□ -0.07
CCDC50-201ENST00000392455 ACADVLP49748 655 aa14.61□□□□□ -0.07
CCDC50-201ENST00000392455 PLK1P53350 603 aa14.61□□□□□ -0.07
CCDC50-201ENST00000392455 CDH8P55286 799 aa14.61□□□□□ -0.07
CCDC50-201ENST00000392455 NINJ1Q92982 152 aa14.61□□□□□ -0.07
CCDC50-201ENST00000392455 ACAT2Q9BWD1 397 aa14.61□□□□□ -0.07
CCDC50-201ENST00000392455 RASGRP1O95267 797 aa14.61□□□□□ -0.07
CCDC50-201ENST00000392455 RPL10P27635 214 aaKnown RBP14.61□□□□□ -0.07
CCDC50-201ENST00000392455 NYAP1Q6ZVC0 841 aa14.61□□□□□ -0.07
CCDC50-201ENST00000392455 REPS2Q8NFH8 660 aa14.61□□□□□ -0.07
CCDC50-201ENST00000392455 ZNF700Q9H0M5 742 aa14.61□□□□□ -0.07
CCDC50-201ENST00000392455 XPNPEP3Q9NQH7 507 aa14.61□□□□□ -0.07
CCDC50-201ENST00000392455 PCDHB1Q9Y5F3 818 aa14.61□□□□□ -0.07
CCDC50-201ENST00000392455 CARD16Q5EG05 197 aa14.6□□□□□ -0.07
CCDC50-201ENST00000392455 RAB12Q6IQ22 244 aa14.6□□□□□ -0.07
CCDC50-201ENST00000392455 GAKO14976 1311 aa14.6□□□□□ -0.07
CCDC50-201ENST00000392455 FADS2O95864 444 aaKnown RBP14.6□□□□□ -0.07
CCDC50-201ENST00000392455 IFNW1P05000 195 aa14.6□□□□□ -0.07
CCDC50-201ENST00000392455 FGF1P05230 155 aa14.6□□□□□ -0.07
CCDC50-201ENST00000392455 PAX7P23759 505 aa14.6□□□□□ -0.07
CCDC50-201ENST00000392455 MERTKQ12866 999 aa14.6□□□□□ -0.07
CCDC50-201ENST00000392455 CAPN13Q6MZZ7 669 aaPredicted RBP14.6□□□□□ -0.07
CCDC50-201ENST00000392455 HTRA1Q92743 480 aa14.6□□□□□ -0.07
CCDC50-201ENST00000392455 C12orf65Q9H3J6 166 aaKnown RBP14.6□□□□□ -0.07
CCDC50-201ENST00000392455 ASB8Q9H765 288 aa14.6□□□□□ -0.07
CCDC50-201ENST00000392455 TRNAU1APQ9NX07 287 aaKnown RBP14.6□□□□□ -0.07
CCDC50-201ENST00000392455 ZNHIT2Q9UHR6 403 aa14.6□□□□□ -0.07
CCDC50-201ENST00000392455 REXO2Q9Y3B8 237 aaKnown RBP14.6□□□□□ -0.07
CCDC50-201ENST00000392455 H0YGN5 161 aa14.6□□□□□ -0.07
CCDC50-201ENST00000392455 RP2O75695 350 aa14.6□□□□□ -0.07
CCDC50-201ENST00000392455 RAB5BP61020 215 aa14.6□□□□□ -0.07
CCDC50-201ENST00000392455 ARSKQ6UWY0 536 aa14.6□□□□□ -0.07
CCDC50-201ENST00000392455 TRAPPC12Q8WVT3 735 aa14.6□□□□□ -0.07
CCDC50-201ENST00000392455 ZNF717Q9BY31 904 aaPredicted RBP14.6□□□□□ -0.07
CCDC50-201ENST00000392455 BRD9Q9H8M2 597 aa14.6□□□□□ -0.07
CCDC50-201ENST00000392455 SCP2D1Q9UJQ7 156 aa14.6□□□□□ -0.07
CCDC50-201ENST00000392455 TPP1O14773 563 aa14.6□□□□□ -0.07
CCDC50-201ENST00000392455 TM7SF2O76062 418 aa14.6□□□□□ -0.07
CCDC50-201ENST00000392455 C22orf31O95567 290 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms