RNA–Protein interactions for RNA: ENST00000390993.1

SNORD28B-201, Transcript of small nucleolar RNA, C/D box 28B, humanhuman

BASIC

Gene SNORD28B, Length 75 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28B-201ENST00000390993 SLC44A1Q8WWI5 657 aa1.21□□□□□ -2.22
SNORD28B-201ENST00000390993 PSPC1Q8WXF1 523 aaKnown RBP1.21□□□□□ -2.22
SNORD28B-201ENST00000390993 POMGNT1Q8WZA1 660 aa1.21□□□□□ -2.22
SNORD28B-201ENST00000390993 SMPDL3BQ92485 455 aa1.21□□□□□ -2.22
SNORD28B-201ENST00000390993 HSD17B8Q92506 261 aa1.21□□□□□ -2.22
SNORD28B-201ENST00000390993 MOCOSQ96EN8 888 aa1.21□□□□□ -2.22
SNORD28B-201ENST00000390993 GIMAP5Q96F15 307 aa1.21□□□□□ -2.22
SNORD28B-201ENST00000390993 POM121L2Q96KW2 1035 aa1.21□□□□□ -2.22
SNORD28B-201ENST00000390993 ATOH8Q96SQ7 321 aa1.21□□□□□ -2.22
SNORD28B-201ENST00000390993 IWS1Q96ST2 819 aa1.21□□□□□ -2.22
SNORD28B-201ENST00000390993 MAP7D2Q96T17 732 aa1.21□□□□□ -2.22
SNORD28B-201ENST00000390993 PCYT2Q99447 389 aa1.21□□□□□ -2.22
SNORD28B-201ENST00000390993 ARPC5LQ9BPX5 153 aa1.21□□□□□ -2.22
SNORD28B-201ENST00000390993 SYT15Q9BQS2 421 aa1.21□□□□□ -2.22
SNORD28B-201ENST00000390993 KCNN2Q9H2S1 579 aa1.21□□□□□ -2.22
SNORD28B-201ENST00000390993 PPCSQ9HAB8 311 aa1.21□□□□□ -2.22
SNORD28B-201ENST00000390993 RANGRFQ9HD47 186 aaPredicted RBP1.21□□□□□ -2.22
SNORD28B-201ENST00000390993 OLFML3Q9NRN5 406 aa1.21□□□□□ -2.22
SNORD28B-201ENST00000390993 RRP7BPQ9NSQ0 103 aa1.21□□□□□ -2.22
SNORD28B-201ENST00000390993 ATAD3AQ9NVI7 634 aa1.21□□□□□ -2.22
SNORD28B-201ENST00000390993 TAS2R10Q9NYW0 307 aa1.21□□□□□ -2.22
SNORD28B-201ENST00000390993 PTTG2Q9NZH5 202 aa1.21□□□□□ -2.22
SNORD28B-201ENST00000390993 FLRT3Q9NZU0 649 aa1.21□□□□□ -2.22
SNORD28B-201ENST00000390993 KLHL8Q9P2G9 620 aaPredicted RBP1.21□□□□□ -2.22
SNORD28B-201ENST00000390993 RASAL2Q9UJF2 1139 aa1.21□□□□□ -2.22
SNORD28B-201ENST00000390993 GJD2Q9UKL4 321 aa1.21□□□□□ -2.22
SNORD28B-201ENST00000390993 SLC7A7Q9UM01 511 aa1.21□□□□□ -2.22
SNORD28B-201ENST00000390993 MTMR6Q9Y217 621 aa1.21□□□□□ -2.22
SNORD28B-201ENST00000390993 R3HDM2Q9Y2K5 976 aaKnown RBP1.21□□□□□ -2.22
SNORD28B-201ENST00000390993 ZHX2Q9Y6X8 837 aa1.21□□□□□ -2.22
SNORD28B-201ENST00000390993 FLT1P17948 1338 aa1.2□□□□□ -2.22
SNORD28B-201ENST00000390993 SMCHD1A6NHR9 2005 aa1.2□□□□□ -2.22
SNORD28B-201ENST00000390993 CACNA1FO60840 1977 aa1.2□□□□□ -2.22
SNORD28B-201ENST00000390993 IGHV4-4A0A075B6R2 117 aa1.2□□□□□ -2.22
SNORD28B-201ENST00000390993 A0A087WW49 117 aa1.2□□□□□ -2.22
SNORD28B-201ENST00000390993 A0A1B0GVY2 172 aa1.2□□□□□ -2.22
SNORD28B-201ENST00000390993 RRN3P2A6NIE6 340 aa1.2□□□□□ -2.22
SNORD28B-201ENST00000390993 KPNA7A9QM74 516 aa1.2□□□□□ -2.22
SNORD28B-201ENST00000390993 E9PQ18 207 aa1.2□□□□□ -2.22
SNORD28B-201ENST00000390993 SNAP23O00161 211 aa1.2□□□□□ -2.22
SNORD28B-201ENST00000390993 HOXC11O43248 304 aaPredicted RBP1.2□□□□□ -2.22
SNORD28B-201ENST00000390993 CRLF1O75462 422 aa1.2□□□□□ -2.22
SNORD28B-201ENST00000390993 ZNF821O75541 412 aaPredicted RBP1.2□□□□□ -2.22
SNORD28B-201ENST00000390993 TRMUO75648 421 aaKnown RBP1.2□□□□□ -2.22
SNORD28B-201ENST00000390993 F9P00740 461 aa1.2□□□□□ -2.22
SNORD28B-201ENST00000390993 TSHBP01222 138 aa1.2□□□□□ -2.22
SNORD28B-201ENST00000390993 HSPA1AP0DMV8 641 aaKnown RBP1.2□□□□□ -2.22
SNORD28B-201ENST00000390993 HSPA1BP0DMV9 641 aaKnown RBP1.2□□□□□ -2.22
SNORD28B-201ENST00000390993 CEACAM1P13688 526 aa1.2□□□□□ -2.22
SNORD28B-201ENST00000390993 CKMT2P17540 419 aa1.2□□□□□ -2.22
SNORD28B-201ENST00000390993 MAPK9P45984 424 aa1.2□□□□□ -2.22
SNORD28B-201ENST00000390993 SLC6A12P48065 614 aa1.2□□□□□ -2.22
SNORD28B-201ENST00000390993 CSRP3P50461 194 aa1.2□□□□□ -2.22
SNORD28B-201ENST00000390993 CCR5P51681 352 aa1.2□□□□□ -2.22
SNORD28B-201ENST00000390993 F2RL1P55085 397 aa1.2□□□□□ -2.22
SNORD28B-201ENST00000390993 CD81P60033 236 aa1.2□□□□□ -2.22
SNORD28B-201ENST00000390993 OLR1P78380 273 aa1.2□□□□□ -2.22
SNORD28B-201ENST00000390993 MS4A2Q01362 244 aa1.2□□□□□ -2.22
SNORD28B-201ENST00000390993 CDR2Q01850 454 aa1.2□□□□□ -2.22
SNORD28B-201ENST00000390993 PTP4A2Q12974 167 aa1.2□□□□□ -2.22
SNORD28B-201ENST00000390993 CSTF3Q12996 717 aaKnown RBP1.2□□□□□ -2.22
SNORD28B-201ENST00000390993 MFAP5Q13361 173 aa1.2□□□□□ -2.22
SNORD28B-201ENST00000390993 PEX6Q13608 980 aa1.2□□□□□ -2.22
SNORD28B-201ENST00000390993 HNRNPDQ14103 355 aaKnown RBP1.2□□□□□ -2.22
SNORD28B-201ENST00000390993 LPAL2Q16609 132 aa1.2□□□□□ -2.22
SNORD28B-201ENST00000390993 MEP1AQ16819 746 aa1.2□□□□□ -2.22
SNORD28B-201ENST00000390993 ZNF805Q5CZA5 627 aa1.2□□□□□ -2.22
SNORD28B-201ENST00000390993 KLC3Q6P597 504 aa1.2□□□□□ -2.22
SNORD28B-201ENST00000390993 PLXDC2Q6UX71 529 aa1.2□□□□□ -2.22
SNORD28B-201ENST00000390993 CYP26C1Q6V0L0 522 aa1.2□□□□□ -2.22
SNORD28B-201ENST00000390993 RAD9BQ6WBX8 426 aa1.2□□□□□ -2.22
SNORD28B-201ENST00000390993 TPRG1Q6ZUI0 275 aa1.2□□□□□ -2.22
SNORD28B-201ENST00000390993 SDCCAG8Q86SQ7 713 aaPredicted RBP1.2□□□□□ -2.22
SNORD28B-201ENST00000390993 ZNF554Q86TJ5 538 aa1.2□□□□□ -2.22
SNORD28B-201ENST00000390993 PTOV1Q86YD1 416 aa1.2□□□□□ -2.22
SNORD28B-201ENST00000390993 PLD3Q8IV08 490 aa1.2□□□□□ -2.22
SNORD28B-201ENST00000390993 CPOQ8IVL8 374 aa1.2□□□□□ -2.22
SNORD28B-201ENST00000390993 SUGP1Q8IWZ8 645 aaKnown RBP1.2□□□□□ -2.22
SNORD28B-201ENST00000390993 SMAP1Q8IYB5 467 aaPredicted RBP1.2□□□□□ -2.22
SNORD28B-201ENST00000390993 CPXCR1Q8N123 301 aa1.2□□□□□ -2.22
SNORD28B-201ENST00000390993 DNAJC22Q8N4W6 341 aa1.2□□□□□ -2.22
SNORD28B-201ENST00000390993 TRIM58Q8NG06 486 aa1.2□□□□□ -2.22
SNORD28B-201ENST00000390993 OR2T12Q8NG77 320 aa1.2□□□□□ -2.22
SNORD28B-201ENST00000390993 OR2L2Q8NH16 312 aa1.2□□□□□ -2.22
SNORD28B-201ENST00000390993 OR8K5Q8NH50 307 aa1.2□□□□□ -2.22
SNORD28B-201ENST00000390993 GSDMBQ8TAX9 411 aa1.2□□□□□ -2.22
SNORD28B-201ENST00000390993 ETNPPLQ8TBG4 499 aa1.2□□□□□ -2.22
SNORD28B-201ENST00000390993 GRHL3Q8TE85 626 aa1.2□□□□□ -2.22
SNORD28B-201ENST00000390993 FCAMRQ8WWV6 532 aa1.2□□□□□ -2.22
SNORD28B-201ENST00000390993 ST8SIA4Q92187 359 aa1.2□□□□□ -2.22
SNORD28B-201ENST00000390993 HTRA1Q92743 480 aa1.2□□□□□ -2.22
SNORD28B-201ENST00000390993 IGSF8Q969P0 613 aa1.2□□□□□ -2.22
SNORD28B-201ENST00000390993 INTS12Q96CB8 462 aaKnown RBP1.2□□□□□ -2.22
SNORD28B-201ENST00000390993 RHBDF1Q96CC6 855 aa1.2□□□□□ -2.22
SNORD28B-201ENST00000390993 ZBTB10Q96DT7 871 aa1.2□□□□□ -2.22
SNORD28B-201ENST00000390993 SMC6Q96SB8 1091 aa1.2□□□□□ -2.22
SNORD28B-201ENST00000390993 SEPT5Q99719 369 aaPredicted RBP1.2□□□□□ -2.22
SNORD28B-201ENST00000390993 VGLL1Q99990 258 aa1.2□□□□□ -2.22
SNORD28B-201ENST00000390993 FGFBP2Q9BYJ0 223 aa1.2□□□□□ -2.22
SNORD28B-201ENST00000390993 PANK2Q9BZ23 570 aa1.2□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms