RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 GCNT3O95395 438 aa3.02□□□□□ -1.93
TRAV40-201ENST00000390467 NADKO95544 446 aaPredicted RBP3.02□□□□□ -1.93
TRAV40-201ENST00000390467 CAVIN2O95810 425 aa3.02□□□□□ -1.93
TRAV40-201ENST00000390467 CEACAM1P13688 526 aa3.02□□□□□ -1.93
TRAV40-201ENST00000390467 SELLP14151 372 aa3.02□□□□□ -1.93
TRAV40-201ENST00000390467 HOXA13P31271 388 aaPredicted RBP3.02□□□□□ -1.93
TRAV40-201ENST00000390467 KRT2P35908 639 aa3.02□□□□□ -1.93
TRAV40-201ENST00000390467 PRCPP42785 496 aa3.02□□□□□ -1.93
TRAV40-201ENST00000390467 CD81P60033 236 aa3.02□□□□□ -1.93
TRAV40-201ENST00000390467 LMO4P61968 165 aa3.02□□□□□ -1.93
TRAV40-201ENST00000390467 ITGA9Q13797 1035 aa3.02□□□□□ -1.93
TRAV40-201ENST00000390467 CCNG2Q16589 344 aa3.02□□□□□ -1.93
TRAV40-201ENST00000390467 KIAA1644Q3SXP7 199 aa3.02□□□□□ -1.93
TRAV40-201ENST00000390467 SOWAHCQ53LP3 525 aaPredicted RBP3.02□□□□□ -1.93
TRAV40-201ENST00000390467 NDUFAF5Q5TEU4 345 aa3.02□□□□□ -1.93
TRAV40-201ENST00000390467 SH2D5Q6ZV89 423 aa3.02□□□□□ -1.93
TRAV40-201ENST00000390467 R3HCC1LQ7Z5L2 792 aaKnown RBP3.02□□□□□ -1.93
TRAV40-201ENST00000390467 GCSAMQ8N6F7 178 aa3.02□□□□□ -1.93
TRAV40-201ENST00000390467 RDM1Q8NG50 284 aa3.02□□□□□ -1.93
TRAV40-201ENST00000390467 KCNG4Q8TDN1 519 aa3.02□□□□□ -1.93
TRAV40-201ENST00000390467 SMARCE1Q969G3 411 aa3.02□□□□□ -1.93
TRAV40-201ENST00000390467 ZNF689Q96CS4 500 aaPredicted RBP3.02□□□□□ -1.93
TRAV40-201ENST00000390467 GFI1Q99684 422 aa3.02□□□□□ -1.93
TRAV40-201ENST00000390467 OPRPNQ99935 248 aaPredicted RBP3.02□□□□□ -1.93
TRAV40-201ENST00000390467 CDK19Q9BWU1 502 aa3.02□□□□□ -1.93
TRAV40-201ENST00000390467 UBN1Q9NPG3 1134 aa3.02□□□□□ -1.93
TRAV40-201ENST00000390467 MBNL1Q9NR56 388 aaKnown RBP3.02□□□□□ -1.93
TRAV40-201ENST00000390467 UBA2Q9UBT2 640 aaPredicted RBP3.02□□□□□ -1.93
TRAV40-201ENST00000390467 RASAL2Q9UJF2 1139 aa3.02□□□□□ -1.93
TRAV40-201ENST00000390467 KCNJ14Q9UNX9 436 aa3.02□□□□□ -1.93
TRAV40-201ENST00000390467 R3HDM2Q9Y2K5 976 aaKnown RBP3.02□□□□□ -1.93
TRAV40-201ENST00000390467 MRPS28Q9Y2Q9 187 aaKnown RBP3.02□□□□□ -1.93
TRAV40-201ENST00000390467 STK36Q9NRP7 1315 aa3.01□□□□□ -1.93
TRAV40-201ENST00000390467 TEX13DA0A0J9YY54 714 aaPredicted RBP3.01□□□□□ -1.93
TRAV40-201ENST00000390467 PSMD14O00487 310 aa3.01□□□□□ -1.93
TRAV40-201ENST00000390467 ZNF217O75362 1048 aa3.01□□□□□ -1.93
TRAV40-201ENST00000390467 SLC25A12O75746 678 aa3.01□□□□□ -1.93
TRAV40-201ENST00000390467 IPO7O95373 1038 aaKnown RBP3.01□□□□□ -1.93
TRAV40-201ENST00000390467 BMP10O95393 424 aa3.01□□□□□ -1.93
TRAV40-201ENST00000390467 ATP1A3P13637 1013 aa3.01□□□□□ -1.93
TRAV40-201ENST00000390467 CTSCP53634 463 aa3.01□□□□□ -1.93
TRAV40-201ENST00000390467 ZBED6P86452 979 aa3.01□□□□□ -1.93
TRAV40-201ENST00000390467 DUOXA1Q1HG43 343 aa3.01□□□□□ -1.93
TRAV40-201ENST00000390467 FFAR4Q5NUL3 377 aa3.01□□□□□ -1.93
TRAV40-201ENST00000390467 CCDC190Q86UF4 302 aa3.01□□□□□ -1.93
TRAV40-201ENST00000390467 GTSCR1Q86UQ5 136 aa3.01□□□□□ -1.93
TRAV40-201ENST00000390467 HCAR2Q8TDS4 363 aa3.01□□□□□ -1.93
TRAV40-201ENST00000390467 SMPDL3BQ92485 455 aa3.01□□□□□ -1.93
TRAV40-201ENST00000390467 PELI2Q9HAT8 420 aa3.01□□□□□ -1.93
TRAV40-201ENST00000390467 EPB41L5Q9HCM4 733 aa3.01□□□□□ -1.93
TRAV40-201ENST00000390467 INTS10Q9NVR2 710 aaKnown RBP3.01□□□□□ -1.93
TRAV40-201ENST00000390467 OGFRQ9NZT2 677 aa3.01□□□□□ -1.93
TRAV40-201ENST00000390467 PAK5Q9P286 719 aa3.01□□□□□ -1.93
TRAV40-201ENST00000390467 ARHGEF40Q8TER5 1519 aa3.01□□□□□ -1.93
TRAV40-201ENST00000390467 A0A1W2PPH5 198 aa3□□□□□ -1.93
TRAV40-201ENST00000390467 PLOD2O00469 737 aa3□□□□□ -1.93
TRAV40-201ENST00000390467 HCRTR2O43614 444 aa3□□□□□ -1.93
TRAV40-201ENST00000390467 SPARCP09486 303 aa3□□□□□ -1.93
TRAV40-201ENST00000390467 LIFP15018 202 aa3□□□□□ -1.93
TRAV40-201ENST00000390467 EPHA2P29317 976 aa3□□□□□ -1.93
TRAV40-201ENST00000390467 THOP1P52888 689 aa3□□□□□ -1.93
TRAV40-201ENST00000390467 MVPQ14764 893 aaKnown RBP3□□□□□ -1.93
TRAV40-201ENST00000390467 SLC1A5Q15758 541 aa3□□□□□ -1.93
TRAV40-201ENST00000390467 TBCEQ15813 527 aaPredicted RBP3□□□□□ -1.93
TRAV40-201ENST00000390467 ADIPOQQ15848 244 aa3□□□□□ -1.93
TRAV40-201ENST00000390467 TMEM95Q3KNT9 176 aa3□□□□□ -1.93
TRAV40-201ENST00000390467 KRTAP5-4Q6L8H1 288 aa3□□□□□ -1.93
TRAV40-201ENST00000390467 TSPAN33Q86UF1 283 aa3□□□□□ -1.93
TRAV40-201ENST00000390467 PTOV1Q86YD1 416 aa3□□□□□ -1.93
TRAV40-201ENST00000390467 PAF1Q8N7H5 531 aa3□□□□□ -1.93
TRAV40-201ENST00000390467 TSPYL6Q8N831 410 aa3□□□□□ -1.93
TRAV40-201ENST00000390467 DDHD1Q8NEL9 900 aa3□□□□□ -1.93
TRAV40-201ENST00000390467 OR2T12Q8NG77 320 aa3□□□□□ -1.93
TRAV40-201ENST00000390467 OR8K5Q8NH50 307 aa3□□□□□ -1.93
TRAV40-201ENST00000390467 PPP4R1Q8TF05 950 aa3□□□□□ -1.93
TRAV40-201ENST00000390467 ZKSCAN4Q969J2 545 aaPredicted RBP3□□□□□ -1.93
TRAV40-201ENST00000390467 SLC47A1Q96FL8 570 aa3□□□□□ -1.93
TRAV40-201ENST00000390467 PRAC1Q96KF2 57 aa3□□□□□ -1.93
TRAV40-201ENST00000390467 SEPT5Q99719 369 aaPredicted RBP3□□□□□ -1.93
TRAV40-201ENST00000390467 PYGO2Q9BRQ0 406 aa3□□□□□ -1.93
TRAV40-201ENST00000390467 RHNO1Q9BSD3 238 aa3□□□□□ -1.93
TRAV40-201ENST00000390467 SEMA6AQ9H2E6 1030 aa3□□□□□ -1.93
TRAV40-201ENST00000390467 ZNF71Q9NQZ8 489 aaPredicted RBP3□□□□□ -1.93
TRAV40-201ENST00000390467 RCC2Q9P258 522 aaKnown RBP3□□□□□ -1.93
TRAV40-201ENST00000390467 YIPF1Q9Y548 306 aa3□□□□□ -1.93
TRAV40-201ENST00000390467 SMAD5-AS1Q9Y6J3 95 aa3□□□□□ -1.93
TRAV40-201ENST00000390467 RNF215Q9Y6U7 377 aa3□□□□□ -1.93
TRAV40-201ENST00000390467 FAM237BA0A1B0GVD1 139 aa2.99□□□□□ -1.93
TRAV40-201ENST00000390467 OR2M5A3KFT3 312 aa2.99□□□□□ -1.93
TRAV40-201ENST00000390467 TMEM189-UBE2V1I3L0A0 370 aa2.99□□□□□ -1.93
TRAV40-201ENST00000390467 PLK4O00444 970 aa2.99□□□□□ -1.93
TRAV40-201ENST00000390467 TCERG1O14776 1098 aaKnown RBP2.99□□□□□ -1.93
TRAV40-201ENST00000390467 CLPTM1O96005 669 aa2.99□□□□□ -1.93
TRAV40-201ENST00000390467 NGFP01138 241 aa2.99□□□□□ -1.93
TRAV40-201ENST00000390467 TPOP07202 933 aa2.99□□□□□ -1.93
TRAV40-201ENST00000390467 ANXA7P20073 488 aaKnown RBP2.99□□□□□ -1.93
TRAV40-201ENST00000390467 CBLP22681 906 aa2.99□□□□□ -1.93
TRAV40-201ENST00000390467 ACADLP28330 430 aa2.99□□□□□ -1.93
TRAV40-201ENST00000390467 BSGP35613 385 aa2.99□□□□□ -1.93
TRAV40-201ENST00000390467 MFAP5Q13361 173 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms