RNA–Protein interactions for RNA: ENST00000390462.1

TRAV35-201, Transcript of T cell receptor alpha variable 35, humanhuman

BASIC

Gene TRAV35, Length 330 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV35-201ENST00000390462 H0YIN7 160 aa6.38□□□□□ -1.39
TRAV35-201ENST00000390462 PPP6CO00743 305 aa6.38□□□□□ -1.39
TRAV35-201ENST00000390462 SMAD9O15198 467 aaKnown RBP6.38□□□□□ -1.39
TRAV35-201ENST00000390462 CLDN3O15551 220 aa6.38□□□□□ -1.39
TRAV35-201ENST00000390462 NUDT21O43809 227 aaKnown RBP6.38□□□□□ -1.39
TRAV35-201ENST00000390462 NEMFO60524 1076 aa6.38□□□□□ -1.39
TRAV35-201ENST00000390462 MED26O95402 600 aa6.38□□□□□ -1.39
TRAV35-201ENST00000390462 C1RP00736 705 aa6.38□□□□□ -1.39
TRAV35-201ENST00000390462 IL1AP01583 271 aa6.38□□□□□ -1.39
TRAV35-201ENST00000390462 MBPP02686 304 aaPredicted RBP6.38□□□□□ -1.39
TRAV35-201ENST00000390462 KRT8P05787 483 aa6.38□□□□□ -1.39
TRAV35-201ENST00000390462 ASGR1P07306 291 aa6.38□□□□□ -1.39
TRAV35-201ENST00000390462 FCGR2AP12318 317 aa6.38□□□□□ -1.39
TRAV35-201ENST00000390462 EEF1B2P24534 225 aaKnown RBP6.38□□□□□ -1.39
TRAV35-201ENST00000390462 LIPAP38571 399 aa6.38□□□□□ -1.39
TRAV35-201ENST00000390462 GPR143P51810 404 aa6.38□□□□□ -1.39
TRAV35-201ENST00000390462 METAP1P53582 386 aa6.38□□□□□ -1.39
TRAV35-201ENST00000390462 HSD11B2P80365 405 aa6.38□□□□□ -1.39
TRAV35-201ENST00000390462 IL24Q13007 206 aa6.38□□□□□ -1.39
TRAV35-201ENST00000390462 IQCCQ4KMZ1 466 aa6.38□□□□□ -1.39
TRAV35-201ENST00000390462 SPATA46Q5T0L3 261 aa6.38□□□□□ -1.39
TRAV35-201ENST00000390462 STXBP5Q5T5C0 1151 aa6.38□□□□□ -1.39
TRAV35-201ENST00000390462 FOXR2Q6PJQ5 311 aa6.38□□□□□ -1.39
TRAV35-201ENST00000390462 DPY19L3Q6ZPD9 716 aa6.38□□□□□ -1.39
TRAV35-201ENST00000390462 DET1Q7L5Y6 550 aa6.38□□□□□ -1.39
TRAV35-201ENST00000390462 RASAL3Q86YV0 1011 aa6.38□□□□□ -1.39
TRAV35-201ENST00000390462 SYT12Q8IV01 421 aa6.38□□□□□ -1.39
TRAV35-201ENST00000390462 DNAJC10Q8IXB1 793 aa6.38□□□□□ -1.39
TRAV35-201ENST00000390462 ZNF595Q8IYB9 648 aa6.38□□□□□ -1.39
TRAV35-201ENST00000390462 OR52N2Q8NGI0 321 aa6.38□□□□□ -1.39
TRAV35-201ENST00000390462 OR8K5Q8NH50 307 aa6.38□□□□□ -1.39
TRAV35-201ENST00000390462 EDC3Q96F86 508 aaKnown RBP6.38□□□□□ -1.39
TRAV35-201ENST00000390462 GPR78Q96P69 363 aa6.38□□□□□ -1.39
TRAV35-201ENST00000390462 NEU1Q99519 415 aa6.38□□□□□ -1.39
TRAV35-201ENST00000390462 SRD5A3Q9H8P0 318 aa6.38□□□□□ -1.39
TRAV35-201ENST00000390462 ECT2Q9H8V3 914 aa6.38□□□□□ -1.39
TRAV35-201ENST00000390462 GPN1Q9HCN4 374 aaPredicted RBP6.38□□□□□ -1.39
TRAV35-201ENST00000390462 GLRX2Q9NS18 164 aa6.38□□□□□ -1.39
TRAV35-201ENST00000390462 MAD2L2Q9UI95 211 aa6.38□□□□□ -1.39
TRAV35-201ENST00000390462 ICKQ9UPZ9 632 aa6.38□□□□□ -1.39
TRAV35-201ENST00000390462 CARD8Q9Y2G2 431 aa6.38□□□□□ -1.39
TRAV35-201ENST00000390462 NAALAD2Q9Y3Q0 740 aa6.38□□□□□ -1.39
TRAV35-201ENST00000390462 NR2E1Q9Y466 385 aa6.38□□□□□ -1.39
TRAV35-201ENST00000390462 ZNF804BA4D1E1 1349 aa6.38□□□□□ -1.39
TRAV35-201ENST00000390462 BCL9LQ86UU0 1499 aa6.38□□□□□ -1.39
TRAV35-201ENST00000390462 ARHGEF5Q12774 1597 aa6.38□□□□□ -1.39
TRAV35-201ENST00000390462 SPHKAPQ2M3C7 1700 aa6.37□□□□□ -1.39
TRAV35-201ENST00000390462 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.37□□□□□ -1.39
TRAV35-201ENST00000390462 A0A1B0GTW7 788 aa6.37□□□□□ -1.39
TRAV35-201ENST00000390462 TARSL2A2RTX5 802 aaKnown RBP6.37□□□□□ -1.39
TRAV35-201ENST00000390462 TRIM77I1YAP6 450 aa6.37□□□□□ -1.39
TRAV35-201ENST00000390462 HRKO00198 91 aa6.37□□□□□ -1.39
TRAV35-201ENST00000390462 SSX5O60225 188 aa6.37□□□□□ -1.39
TRAV35-201ENST00000390462 TMPRSS11DO60235 418 aa6.37□□□□□ -1.39
TRAV35-201ENST00000390462 GPRIN2O60269 458 aa6.37□□□□□ -1.39
TRAV35-201ENST00000390462 PRAMEF2O60811 474 aa6.37□□□□□ -1.39
TRAV35-201ENST00000390462 SCGB2A1O75556 95 aa6.37□□□□□ -1.39
TRAV35-201ENST00000390462 JRKO75564 520 aa6.37□□□□□ -1.39
TRAV35-201ENST00000390462 GPANK1O95872 356 aa6.37□□□□□ -1.39
TRAV35-201ENST00000390462 SBK2P0C263 348 aa6.37□□□□□ -1.39
TRAV35-201ENST00000390462 VPREB1P12018 145 aa6.37□□□□□ -1.39
TRAV35-201ENST00000390462 TCF4P15884 667 aa6.37□□□□□ -1.39
TRAV35-201ENST00000390462 GNAT2P19087 354 aa6.37□□□□□ -1.39
TRAV35-201ENST00000390462 NR1D1P20393 614 aa6.37□□□□□ -1.39
TRAV35-201ENST00000390462 HOXD10P28358 340 aa6.37□□□□□ -1.39
TRAV35-201ENST00000390462 CD97P48960 835 aa6.37□□□□□ -1.39
TRAV35-201ENST00000390462 NCKAP1LP55160 1127 aa6.37□□□□□ -1.39
TRAV35-201ENST00000390462 EEFSECP57772 596 aaKnown RBP6.37□□□□□ -1.39
TRAV35-201ENST00000390462 KRT33BQ14525 404 aa6.37□□□□□ -1.39
TRAV35-201ENST00000390462 USP41Q3LFD5 358 aa6.37□□□□□ -1.39
TRAV35-201ENST00000390462 EPC2Q52LR7 807 aa6.37□□□□□ -1.39
TRAV35-201ENST00000390462 C6orf141Q5SZD1 244 aa6.37□□□□□ -1.39
TRAV35-201ENST00000390462 WDR88Q6ZMY6 472 aa6.37□□□□□ -1.39
TRAV35-201ENST00000390462 VASH2Q86V25 355 aa6.37□□□□□ -1.39
TRAV35-201ENST00000390462 RFX6Q8HWS3 928 aa6.37□□□□□ -1.39
TRAV35-201ENST00000390462 FBXO39Q8N4B4 442 aa6.37□□□□□ -1.39
TRAV35-201ENST00000390462 CAGE1Q8TC20 777 aa6.37□□□□□ -1.39
TRAV35-201ENST00000390462 AGR3Q8TD06 166 aa6.37□□□□□ -1.39
TRAV35-201ENST00000390462 TRPC4APQ8TEL6 797 aa6.37□□□□□ -1.39
TRAV35-201ENST00000390462 TMEM170AQ8WVE7 144 aa6.37□□□□□ -1.39
TRAV35-201ENST00000390462 NSMAFQ92636 917 aa6.37□□□□□ -1.39
TRAV35-201ENST00000390462 AKAP1Q92667 903 aaKnown RBP eCLIP6.37□□□□□ -1.39
TRAV35-201ENST00000390462 R3HDM4Q96D70 268 aa6.37□□□□□ -1.39
TRAV35-201ENST00000390462 NUDCD1Q96RS6 583 aa6.37□□□□□ -1.39
TRAV35-201ENST00000390462 SSX3Q99909 188 aa6.37□□□□□ -1.39
TRAV35-201ENST00000390462 ACTRT3Q9BYD9 372 aa6.37□□□□□ -1.39
TRAV35-201ENST00000390462 TPSD1Q9BZJ3 242 aa6.37□□□□□ -1.39
TRAV35-201ENST00000390462 PPIL3Q9H2H8 161 aaKnown RBP6.37□□□□□ -1.39
TRAV35-201ENST00000390462 AGO3Q9H9G7 860 aaKnown RBP6.37□□□□□ -1.39
TRAV35-201ENST00000390462 LMAN1LQ9HAT1 526 aa6.37□□□□□ -1.39
TRAV35-201ENST00000390462 Q9N2J8 555 aa6.37□□□□□ -1.39
TRAV35-201ENST00000390462 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.37□□□□□ -1.39
TRAV35-201ENST00000390462 SMPD3Q9NY59 655 aaPredicted RBP6.37□□□□□ -1.39
TRAV35-201ENST00000390462 OR6C3Q9NZP0 311 aa6.37□□□□□ -1.39
TRAV35-201ENST00000390462 FBXO40Q9UH90 709 aa6.37□□□□□ -1.39
TRAV35-201ENST00000390462 TSPAN16Q9UKR8 245 aa6.37□□□□□ -1.39
TRAV35-201ENST00000390462 DTX4Q9Y2E6 619 aa6.37□□□□□ -1.39
TRAV35-201ENST00000390462 LSM4Q9Y4Z0 139 aaKnown RBP6.37□□□□□ -1.39
TRAV35-201ENST00000390462 CEPT1Q9Y6K0 416 aa6.37□□□□□ -1.39
TRAV35-201ENST00000390462 UNC13BO14795 1591 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms