RNA–Protein interactions for RNA: ENST00000383897.1

RNU1-39P-201, Transcript of RNA, U1 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU1-39P, Length 165 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-39P-201ENST00000383897 COPB2P35606 906 aa3.34□□□□□ -1.87
RNU1-39P-201ENST00000383897 EIF2S3P41091 472 aaKnown RBP3.34□□□□□ -1.87
RNU1-39P-201ENST00000383897 CLCN3P51790 818 aa3.34□□□□□ -1.87
RNU1-39P-201ENST00000383897 ZNF75DP51815 510 aa3.34□□□□□ -1.87
RNU1-39P-201ENST00000383897 RAD23AP54725 363 aa3.34□□□□□ -1.87
RNU1-39P-201ENST00000383897 CSE1LP55060 971 aaKnown RBP3.34□□□□□ -1.87
RNU1-39P-201ENST00000383897 DLX5P56178 289 aa3.34□□□□□ -1.87
RNU1-39P-201ENST00000383897 KRTAP10-6P60371 365 aaPredicted RBP3.34□□□□□ -1.87
RNU1-39P-201ENST00000383897 GAGE1Q13065 139 aa3.34□□□□□ -1.87
RNU1-39P-201ENST00000383897 GAGE4Q13068 117 aa3.34□□□□□ -1.87
RNU1-39P-201ENST00000383897 ALCAMQ13740 583 aa3.34□□□□□ -1.87
RNU1-39P-201ENST00000383897 COG2Q14746 738 aa3.34□□□□□ -1.87
RNU1-39P-201ENST00000383897 CTF1Q16619 201 aa3.34□□□□□ -1.87
RNU1-39P-201ENST00000383897 CRY2Q49AN0 593 aa3.34□□□□□ -1.87
RNU1-39P-201ENST00000383897 IGSF11Q5DX21 431 aa3.34□□□□□ -1.87
RNU1-39P-201ENST00000383897 C1orf141Q5JVX7 400 aa3.34□□□□□ -1.87
RNU1-39P-201ENST00000383897 C9orf50Q5SZB4 431 aa3.34□□□□□ -1.87
RNU1-39P-201ENST00000383897 WBP2NLQ6ICG8 309 aa3.34□□□□□ -1.87
RNU1-39P-201ENST00000383897 RPUSD3Q6P087 351 aaKnown RBP3.34□□□□□ -1.87
RNU1-39P-201ENST00000383897 FBXO46Q6PJ61 603 aaPredicted RBP3.34□□□□□ -1.87
RNU1-39P-201ENST00000383897 USP43Q70EL4 1123 aa3.34□□□□□ -1.87
RNU1-39P-201ENST00000383897 MTSS1LQ765P7 747 aa3.34□□□□□ -1.87
RNU1-39P-201ENST00000383897 THNSL1Q8IYQ7 743 aa3.34□□□□□ -1.87
RNU1-39P-201ENST00000383897 AFAP1Q8N556 730 aa3.34□□□□□ -1.87
RNU1-39P-201ENST00000383897 OR1J2Q8NGS2 313 aa3.34□□□□□ -1.87
RNU1-39P-201ENST00000383897 RND1Q92730 232 aa3.34□□□□□ -1.87
RNU1-39P-201ENST00000383897 HDAC11Q96DB2 347 aa3.34□□□□□ -1.87
RNU1-39P-201ENST00000383897 TMCO6Q96DC7 493 aa3.34□□□□□ -1.87
RNU1-39P-201ENST00000383897 PGAP3Q96FM1 320 aaPredicted RBP3.34□□□□□ -1.87
RNU1-39P-201ENST00000383897 INPP4AQ96PE3 977 aaPredicted RBP3.34□□□□□ -1.87
RNU1-39P-201ENST00000383897 PAFAH2Q99487 392 aa3.34□□□□□ -1.87
RNU1-39P-201ENST00000383897 PKP4Q99569 1192 aa3.34□□□□□ -1.87
RNU1-39P-201ENST00000383897 SLX1AQ9BQ83 275 aa3.34□□□□□ -1.87
RNU1-39P-201ENST00000383897 ADPGKQ9BRR6 497 aa3.34□□□□□ -1.87
RNU1-39P-201ENST00000383897 PPP1R3EQ9H7J1 279 aa3.34□□□□□ -1.87
RNU1-39P-201ENST00000383897 DNAJC18Q9H819 358 aa3.34□□□□□ -1.87
RNU1-39P-201ENST00000383897 LRRC4Q9HBW1 653 aa3.34□□□□□ -1.87
RNU1-39P-201ENST00000383897 MKKSQ9NPJ1 570 aaPredicted RBP3.34□□□□□ -1.87
RNU1-39P-201ENST00000383897 DDX4Q9NQI0 724 aaKnown RBP3.34□□□□□ -1.87
RNU1-39P-201ENST00000383897 CNGB3Q9NQW8 809 aa3.34□□□□□ -1.87
RNU1-39P-201ENST00000383897 ACSS1Q9NUB1 689 aaPredicted RBP3.34□□□□□ -1.87
RNU1-39P-201ENST00000383897 ANAPC2Q9UJX6 822 aa3.34□□□□□ -1.87
RNU1-39P-201ENST00000383897 ACSL5Q9ULC5 683 aa3.34□□□□□ -1.87
RNU1-39P-201ENST00000383897 KCNS2Q9ULS6 477 aa3.34□□□□□ -1.87
RNU1-39P-201ENST00000383897 TRPV2Q9Y5S1 764 aa3.34□□□□□ -1.87
RNU1-39P-201ENST00000383897 GPR75-ASB3A0A0A6YYF3 556 aa3.33□□□□□ -1.88
RNU1-39P-201ENST00000383897 C1orf226A1L170 272 aa3.33□□□□□ -1.88
RNU1-39P-201ENST00000383897 HNRNPCL2B2RXH8 293 aa3.33□□□□□ -1.88
RNU1-39P-201ENST00000383897 M0QZ24 198 aa3.33□□□□□ -1.88
RNU1-39P-201ENST00000383897 SOCS6O14544 535 aa3.33□□□□□ -1.88
RNU1-39P-201ENST00000383897 PAPSS1O43252 624 aaPredicted RBP3.33□□□□□ -1.88
RNU1-39P-201ENST00000383897 PRAMEF11O60813 436 aa3.33□□□□□ -1.88
RNU1-39P-201ENST00000383897 NDUFS7O75251 213 aa3.33□□□□□ -1.88
RNU1-39P-201ENST00000383897 G6PDP11413 515 aa3.33□□□□□ -1.88
RNU1-39P-201ENST00000383897 MMP9P14780 707 aa3.33□□□□□ -1.88
RNU1-39P-201ENST00000383897 EEF1B2P24534 225 aaKnown RBP3.33□□□□□ -1.88
RNU1-39P-201ENST00000383897 ACADLP28330 430 aa3.33□□□□□ -1.88
RNU1-39P-201ENST00000383897 HNRNPH1P31943 449 aaKnown RBP3.33□□□□□ -1.88
RNU1-39P-201ENST00000383897 RAB28P51157 221 aa3.33□□□□□ -1.88
RNU1-39P-201ENST00000383897 TMF1P82094 1093 aa3.33□□□□□ -1.88
RNU1-39P-201ENST00000383897 CXCL9Q07325 125 aa3.33□□□□□ -1.88
RNU1-39P-201ENST00000383897 GRAPQ13588 217 aa3.33□□□□□ -1.88
RNU1-39P-201ENST00000383897 ARMC4Q5T2S8 1044 aa3.33□□□□□ -1.88
RNU1-39P-201ENST00000383897 LRIF1Q5T3J3 769 aa3.33□□□□□ -1.88
RNU1-39P-201ENST00000383897 WDR73Q6P4I2 378 aa3.33□□□□□ -1.88
RNU1-39P-201ENST00000383897 C11orf88Q6PI97 169 aa3.33□□□□□ -1.88
RNU1-39P-201ENST00000383897 TPRG1Q6ZUI0 275 aa3.33□□□□□ -1.88
RNU1-39P-201ENST00000383897 HAUS6Q7Z4H7 955 aa3.33□□□□□ -1.88
RNU1-39P-201ENST00000383897 SDCCAG8Q86SQ7 713 aaPredicted RBP3.33□□□□□ -1.88
RNU1-39P-201ENST00000383897 GPR180Q86V85 440 aa3.33□□□□□ -1.88
RNU1-39P-201ENST00000383897 LINC00346Q8IVM7 164 aa3.33□□□□□ -1.88
RNU1-39P-201ENST00000383897 NKAIN3Q8N8D7 197 aa3.33□□□□□ -1.88
RNU1-39P-201ENST00000383897 ZNF441Q8N8Z8 693 aa3.33□□□□□ -1.88
RNU1-39P-201ENST00000383897 POC1AQ8NBT0 407 aa3.33□□□□□ -1.88
RNU1-39P-201ENST00000383897 HJURPQ8NCD3 748 aaPredicted RBP3.33□□□□□ -1.88
RNU1-39P-201ENST00000383897 PTPMT1Q8WUK0 201 aaPredicted RBP3.33□□□□□ -1.88
RNU1-39P-201ENST00000383897 ATL1Q8WXF7 558 aa3.33□□□□□ -1.88
RNU1-39P-201ENST00000383897 LPGAT1Q92604 370 aa3.33□□□□□ -1.88
RNU1-39P-201ENST00000383897 ATP6V1E2Q96A05 226 aa3.33□□□□□ -1.88
RNU1-39P-201ENST00000383897 PTERQ96BW5 349 aa3.33□□□□□ -1.88
RNU1-39P-201ENST00000383897 ARSGQ96EG1 525 aa3.33□□□□□ -1.88
RNU1-39P-201ENST00000383897 NODALQ96S42 347 aa3.33□□□□□ -1.88
RNU1-39P-201ENST00000383897 GAD1Q99259 594 aa3.33□□□□□ -1.88
RNU1-39P-201ENST00000383897 EGFL8Q99944 293 aa3.33□□□□□ -1.88
RNU1-39P-201ENST00000383897 SRSF8Q9BRL6 282 aaKnown RBP3.33□□□□□ -1.88
RNU1-39P-201ENST00000383897 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.33□□□□□ -1.88
RNU1-39P-201ENST00000383897 DNAJB4Q9UDY4 337 aa3.33□□□□□ -1.88
RNU1-39P-201ENST00000383897 RASAL2Q9UJF2 1139 aa3.33□□□□□ -1.88
RNU1-39P-201ENST00000383897 OSGIN1Q9UJX0 560 aa3.33□□□□□ -1.88
RNU1-39P-201ENST00000383897 PLAGL1Q9UM63 463 aa3.33□□□□□ -1.88
RNU1-39P-201ENST00000383897 CLIC4Q9Y696 253 aa3.33□□□□□ -1.88
RNU1-39P-201ENST00000383897 MAGEA13PA6NCF6 341 aa3.32□□□□□ -1.88
RNU1-39P-201ENST00000383897 A8MXE2 369 aa3.32□□□□□ -1.88
RNU1-39P-201ENST00000383897 TULP2O00295 520 aa3.32□□□□□ -1.88
RNU1-39P-201ENST00000383897 BUD23O43709 281 aaKnown RBP3.32□□□□□ -1.88
RNU1-39P-201ENST00000383897 XPNPEP2O43895 674 aa3.32□□□□□ -1.88
RNU1-39P-201ENST00000383897 HSPA4LO95757 839 aa3.32□□□□□ -1.88
RNU1-39P-201ENST00000383897 EGFP01133 1207 aa3.32□□□□□ -1.88
RNU1-39P-201ENST00000383897 CYC1P08574 325 aa3.32□□□□□ -1.88
RNU1-39P-201ENST00000383897 F7P08709 466 aaPredicted RBP3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms