RNA–Protein interactions for RNA: ENST00000381140.8

GTF3A-201, Transcript of general transcription factor IIIA, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-201ENST00000381140 SERPINB12Q96P63 405 aa19.11■□□□□ 0.65
GTF3A-201ENST00000381140 COPS8Q99627 209 aa19.11■□□□□ 0.65
GTF3A-201ENST00000381140 SYNDIG1Q9H7V2 258 aa19.11■□□□□ 0.65
GTF3A-201ENST00000381140 SAMD15Q9P1V8 674 aa19.11■□□□□ 0.65
GTF3A-201ENST00000381140 FAM8A1Q9UBU6 413 aa19.11■□□□□ 0.65
GTF3A-201ENST00000381140 SLC23A2Q9UGH3 650 aa19.11■□□□□ 0.65
GTF3A-201ENST00000381140 UNC13CQ8NB66 2214 aa19.11■□□□□ 0.65
GTF3A-201ENST00000381140 CFAP99D6REC4 459 aa19.1■□□□□ 0.65
GTF3A-201ENST00000381140 NOBOXO60393 691 aa19.1■□□□□ 0.65
GTF3A-201ENST00000381140 RALBP11234 206 aa19.1■□□□□ 0.65
GTF3A-201ENST00000381140 SPINK2P20155 84 aa19.1■□□□□ 0.65
GTF3A-201ENST00000381140 ACRV1P26436 265 aa19.1■□□□□ 0.65
GTF3A-201ENST00000381140 BIRC2Q13490 618 aa19.1■□□□□ 0.65
GTF3A-201ENST00000381140 C14orf28Q4W4Y0 310 aa19.1■□□□□ 0.65
GTF3A-201ENST00000381140 PERM1Q5SV97 790 aa19.1■□□□□ 0.65
GTF3A-201ENST00000381140 PCGF5Q86SE9 256 aa19.1■□□□□ 0.65
GTF3A-201ENST00000381140 OTUD6BQ8N6M0 293 aa19.1■□□□□ 0.65
GTF3A-201ENST00000381140 BEND7Q8N7W2 519 aaPredicted RBP19.1■□□□□ 0.65
GTF3A-201ENST00000381140 TBRG4Q969Z0 631 aaKnown RBP eCLIP19.1■□□□□ 0.65
GTF3A-201ENST00000381140 ZDHHC3Q9NYG2 299 aa19.1■□□□□ 0.65
GTF3A-201ENST00000381140 RIMKLBQ9ULI2 386 aa19.1■□□□□ 0.65
GTF3A-201ENST00000381140 SOX13Q9UN79 622 aa19.1■□□□□ 0.65
GTF3A-201ENST00000381140 UTP11Q9Y3A2 253 aaKnown RBP19.1■□□□□ 0.65
GTF3A-201ENST00000381140 PCDHGA1Q9Y5H4 931 aa19.1■□□□□ 0.65
GTF3A-201ENST00000381140 MAD1L1Q9Y6D9 718 aa19.1■□□□□ 0.65
GTF3A-201ENST00000381140 AGAP14A8MT82 685 aa19.09■□□□□ 0.65
GTF3A-201ENST00000381140 EML2O95834 649 aa19.09■□□□□ 0.65
GTF3A-201ENST00000381140 MLNP12872 115 aa19.09■□□□□ 0.65
GTF3A-201ENST00000381140 PSMA3P25788 255 aa19.09■□□□□ 0.65
GTF3A-201ENST00000381140 FOXN2P32314 431 aa19.09■□□□□ 0.65
GTF3A-201ENST00000381140 B4GALNT1Q00973 533 aa19.09■□□□□ 0.65
GTF3A-201ENST00000381140 GUCY2DQ02846 1103 aa19.09■□□□□ 0.65
GTF3A-201ENST00000381140 SEPT7Q16181 437 aaKnown RBP19.09■□□□□ 0.65
GTF3A-201ENST00000381140 DBN1Q16643 649 aa19.09■□□□□ 0.65
GTF3A-201ENST00000381140 DUPD1Q68J44 220 aa19.09■□□□□ 0.65
GTF3A-201ENST00000381140 IFT20Q8IY31 132 aa19.09■□□□□ 0.65
GTF3A-201ENST00000381140 GPR156Q8NFN8 814 aa19.09■□□□□ 0.65
GTF3A-201ENST00000381140 OR4L1Q8NH43 312 aa19.09■□□□□ 0.65
GTF3A-201ENST00000381140 ADAMTS14Q8WXS8 1223 aa19.09■□□□□ 0.65
GTF3A-201ENST00000381140 CCDC74AQ96AQ1 378 aa19.09■□□□□ 0.65
GTF3A-201ENST00000381140 TRIM56Q9BRZ2 755 aaKnown RBP19.09■□□□□ 0.65
GTF3A-201ENST00000381140 ERP44Q9BS26 406 aa19.09■□□□□ 0.65
GTF3A-201ENST00000381140 TIMM29Q9BSF4 260 aa19.09■□□□□ 0.65
GTF3A-201ENST00000381140 KIFC1Q9BW19 673 aa19.09■□□□□ 0.65
GTF3A-201ENST00000381140 TBC1D29Q9UFV1 150 aa19.09■□□□□ 0.65
GTF3A-201ENST00000381140 TRBV5-4A0A0C4DH59 114 aa19.08■□□□□ 0.65
GTF3A-201ENST00000381140 EME2A4GXA9 379 aaPredicted RBP19.08■□□□□ 0.65
GTF3A-201ENST00000381140 SDR42E2A6NKP2 422 aa19.08■□□□□ 0.65
GTF3A-201ENST00000381140 PDZK1P1A8MUH7 402 aa19.08■□□□□ 0.65
GTF3A-201ENST00000381140 POP7O75817 140 aaKnown RBP19.08■□□□□ 0.65
GTF3A-201ENST00000381140 TRIM16O95361 564 aa19.08■□□□□ 0.65
GTF3A-201ENST00000381140 VCLP18206 1134 aa19.08■□□□□ 0.65
GTF3A-201ENST00000381140 IVDP26440 423 aa19.08■□□□□ 0.65
GTF3A-201ENST00000381140 DRG2P55039 364 aaKnown RBP19.08■□□□□ 0.65
GTF3A-201ENST00000381140 VSNL1P62760 191 aa19.08■□□□□ 0.65
GTF3A-201ENST00000381140 ACVR1Q04771 509 aa19.08■□□□□ 0.65
GTF3A-201ENST00000381140 ILKQ13418 452 aa19.08■□□□□ 0.65
GTF3A-201ENST00000381140 FASTKD1Q53R41 847 aaKnown RBP19.08■□□□□ 0.65
GTF3A-201ENST00000381140 OGFOD3Q6PK18 319 aa19.08■□□□□ 0.65
GTF3A-201ENST00000381140 NAGSQ8N159 534 aa19.08■□□□□ 0.65
GTF3A-201ENST00000381140 EIF1ADQ8N9N8 165 aaKnown RBP19.08■□□□□ 0.65
GTF3A-201ENST00000381140 MAPK15Q8TD08 544 aa19.08■□□□□ 0.65
GTF3A-201ENST00000381140 PEX13Q92968 403 aa19.08■□□□□ 0.65
GTF3A-201ENST00000381140 NAT6Q93015 286 aa19.08■□□□□ 0.65
GTF3A-201ENST00000381140 MFSD3Q96ES6 412 aa19.08■□□□□ 0.65
GTF3A-201ENST00000381140 SNF8Q96H20 258 aa19.08■□□□□ 0.65
GTF3A-201ENST00000381140 ABCG4Q9H172 646 aa19.08■□□□□ 0.65
GTF3A-201ENST00000381140 MRM3Q9HC36 420 aaKnown RBP19.08■□□□□ 0.65
GTF3A-201ENST00000381140 EPB41L5Q9HCM4 733 aa19.08■□□□□ 0.65
GTF3A-201ENST00000381140 PRDM8Q9NQV8 689 aa19.08■□□□□ 0.65
GTF3A-201ENST00000381140 TREX1Q9NSU2 369 aa19.08■□□□□ 0.65
GTF3A-201ENST00000381140 CATSPERZQ9NTU4 200 aa19.08■□□□□ 0.65
GTF3A-201ENST00000381140 ANAPC5Q9UJX4 755 aa19.08■□□□□ 0.65
GTF3A-201ENST00000381140 SNX24Q9Y343 169 aa19.08■□□□□ 0.65
GTF3A-201ENST00000381140 ATP1B2P14415 290 aaPredicted RBP19.07■□□□□ 0.64
GTF3A-201ENST00000381140 ITGA8P53708 1063 aa19.07■□□□□ 0.64
GTF3A-201ENST00000381140 BRD3Q15059 726 aa19.07■□□□□ 0.64
GTF3A-201ENST00000381140 RAB44Q7Z6P3 723 aaPredicted RBP19.07■□□□□ 0.64
GTF3A-201ENST00000381140 C11orf96Q7Z7L8 435 aa19.07■□□□□ 0.64
GTF3A-201ENST00000381140 LDB1Q86U70 411 aaPredicted RBP19.07■□□□□ 0.64
GTF3A-201ENST00000381140 AMZ2Q86W34 360 aa19.07■□□□□ 0.64
GTF3A-201ENST00000381140 ARL14Q8N4G2 192 aa19.07■□□□□ 0.64
GTF3A-201ENST00000381140 Q8N9G6 341 aaPredicted RBP19.07■□□□□ 0.64
GTF3A-201ENST00000381140 HEXDCQ8WVB3 486 aa19.07■□□□□ 0.64
GTF3A-201ENST00000381140 ANKRD7Q92527 254 aa19.07■□□□□ 0.64
GTF3A-201ENST00000381140 ZNF669Q96BR6 464 aaPredicted RBP19.07■□□□□ 0.64
GTF3A-201ENST00000381140 DPH5Q9H2P9 285 aa19.07■□□□□ 0.64
GTF3A-201ENST00000381140 RNF215Q9Y6U7 377 aa19.07■□□□□ 0.64
GTF3A-201ENST00000381140 NCOR2Q9Y618 2525 aa19.07■□□□□ 0.64
GTF3A-201ENST00000381140 KNTC1P50748 2209 aa19.07■□□□□ 0.64
GTF3A-201ENST00000381140 CCDC151A5D8V7 595 aa19.06■□□□□ 0.64
GTF3A-201ENST00000381140 FAM149AA5PLN7 773 aa19.06■□□□□ 0.64
GTF3A-201ENST00000381140 RHPN2P1A8MT19 583 aa19.06■□□□□ 0.64
GTF3A-201ENST00000381140 BANF1O75531 89 aa19.06■□□□□ 0.64
GTF3A-201ENST00000381140 DKK1O94907 266 aa19.06■□□□□ 0.64
GTF3A-201ENST00000381140 VAPBO95292 243 aa19.06■□□□□ 0.64
GTF3A-201ENST00000381140 H2AFXP16104 143 aaPredicted RBP19.06■□□□□ 0.64
GTF3A-201ENST00000381140 RPL10P27635 214 aaKnown RBP19.06■□□□□ 0.64
GTF3A-201ENST00000381140 PMLP29590 882 aa19.06■□□□□ 0.64
GTF3A-201ENST00000381140 E2F1Q01094 437 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms