RNA–Protein interactions for RNA: ENST00000380701.7

CCDC171-201, Transcript of coiled-coil domain containing 171, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC171, Length 6,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-201ENST00000380701 LIN7AO14910 233 aaPredicted RBP7.1□□□□□ -1.27
CCDC171-201ENST00000380701 ADAMDEC1O15204 470 aa7.1□□□□□ -1.27
CCDC171-201ENST00000380701 MTRF1O75570 445 aaKnown RBP7.1□□□□□ -1.27
CCDC171-201ENST00000380701 GATBO75879 557 aaKnown RBP7.1□□□□□ -1.27
CCDC171-201ENST00000380701 NOL4O94818 638 aa7.1□□□□□ -1.27
CCDC171-201ENST00000380701 F2P00734 622 aa7.1□□□□□ -1.27
CCDC171-201ENST00000380701 CFIP05156 583 aa7.1□□□□□ -1.27
CCDC171-201ENST00000380701 VIPR1P32241 457 aa7.1□□□□□ -1.27
CCDC171-201ENST00000380701 TMED10P49755 219 aaKnown RBP7.1□□□□□ -1.27
CCDC171-201ENST00000380701 RASGEF1BQ0VAM2 473 aa7.1□□□□□ -1.27
CCDC171-201ENST00000380701 ZNF846Q147U1 533 aa7.1□□□□□ -1.27
CCDC171-201ENST00000380701 TCHHL1Q5QJ38 904 aaPredicted RBP7.1□□□□□ -1.27
CCDC171-201ENST00000380701 SDHAF4Q5VUM1 108 aa7.1□□□□□ -1.27
CCDC171-201ENST00000380701 NAIF1Q69YI7 327 aaPredicted RBP7.1□□□□□ -1.27
CCDC171-201ENST00000380701 IZUMO2Q6UXV1 221 aa7.1□□□□□ -1.27
CCDC171-201ENST00000380701 GDPD4Q6W3E5 623 aa7.1□□□□□ -1.27
CCDC171-201ENST00000380701 PRR23CQ6ZRP0 262 aa7.1□□□□□ -1.27
CCDC171-201ENST00000380701 LRRTM4Q86VH4 590 aa7.1□□□□□ -1.27
CCDC171-201ENST00000380701 NUDT13Q86X67 352 aa7.1□□□□□ -1.27
CCDC171-201ENST00000380701 HID1Q8IV36 788 aa7.1□□□□□ -1.27
CCDC171-201ENST00000380701 GPR156Q8NFN8 814 aa7.1□□□□□ -1.27
CCDC171-201ENST00000380701 TNFRSF25Q93038 417 aa7.1□□□□□ -1.27
CCDC171-201ENST00000380701 EFHD2Q96C19 240 aaPredicted RBP7.1□□□□□ -1.27
CCDC171-201ENST00000380701 C1orf50Q9BV19 199 aa7.1□□□□□ -1.27
CCDC171-201ENST00000380701 MCCC2Q9HCC0 563 aa7.1□□□□□ -1.27
CCDC171-201ENST00000380701 C14orf105Q9NVL8 296 aa7.1□□□□□ -1.27
CCDC171-201ENST00000380701 ZDHHC3Q9NYG2 299 aa7.1□□□□□ -1.27
CCDC171-201ENST00000380701 MOCS1Q9NZB8 636 aa7.1□□□□□ -1.27
CCDC171-201ENST00000380701 DLGAP2Q9P1A6 1054 aa7.1□□□□□ -1.27
CCDC171-201ENST00000380701 PTGFRNQ9P2B2 879 aa7.1□□□□□ -1.27
CCDC171-201ENST00000380701 IL36AQ9UHA7 158 aa7.1□□□□□ -1.27
CCDC171-201ENST00000380701 PRR5-ARHGAP8B1AHC4 643 aa7.1□□□□□ -1.27
CCDC171-201ENST00000380701 CSTF2P33240 577 aaKnown RBP eCLIP7.1□□□□□ -1.27
CCDC171-201ENST00000380701 OMPP47874 163 aa7.1□□□□□ -1.27
CCDC171-201ENST00000380701 RAB2AP61019 212 aa7.1□□□□□ -1.27
CCDC171-201ENST00000380701 CAMK1Q14012 370 aa7.1□□□□□ -1.27
CCDC171-201ENST00000380701 MBLAC2Q68D91 279 aa7.1□□□□□ -1.27
CCDC171-201ENST00000380701 MON1BQ7L1V2 547 aa7.1□□□□□ -1.27
CCDC171-201ENST00000380701 ADGRD2Q7Z7M1 963 aa7.1□□□□□ -1.27
CCDC171-201ENST00000380701 NIPA2Q8N8Q9 360 aa7.1□□□□□ -1.27
CCDC171-201ENST00000380701 PRELID2Q8N945 189 aa7.1□□□□□ -1.27
CCDC171-201ENST00000380701 FAM13CQ8NE31 585 aa7.1□□□□□ -1.27
CCDC171-201ENST00000380701 ZNF461Q8TAF7 563 aa7.1□□□□□ -1.27
CCDC171-201ENST00000380701 GDPD5Q8WTR4 605 aa7.1□□□□□ -1.27
CCDC171-201ENST00000380701 BRINP2Q9C0B6 783 aa7.1□□□□□ -1.27
CCDC171-201ENST00000380701 MAT2BQ9NZL9 334 aa7.1□□□□□ -1.27
CCDC171-201ENST00000380701 ZNF282Q9UDV7 671 aaPredicted RBP7.1□□□□□ -1.27
CCDC171-201ENST00000380701 SCML2Q9UQR0 700 aa7.1□□□□□ -1.27
CCDC171-201ENST00000380701 RBM7Q9Y580 266 aaKnown RBP7.1□□□□□ -1.27
CCDC171-201ENST00000380701 A0A1W2PQ45 241 aaPredicted RBP7.1□□□□□ -1.27
CCDC171-201ENST00000380701 A0A1W2PQY0 241 aa7.1□□□□□ -1.27
CCDC171-201ENST00000380701 ONECUT3O60422 494 aaPredicted RBP7.1□□□□□ -1.27
CCDC171-201ENST00000380701 IFNW1P05000 195 aa7.1□□□□□ -1.27
CCDC171-201ENST00000380701 LIMK2P53671 638 aa7.1□□□□□ -1.27
CCDC171-201ENST00000380701 RAB25P57735 213 aa7.1□□□□□ -1.27
CCDC171-201ENST00000380701 RGS8P57771 180 aaPredicted RBP7.1□□□□□ -1.27
CCDC171-201ENST00000380701 TXNL4AP83876 142 aaKnown RBP7.1□□□□□ -1.27
CCDC171-201ENST00000380701 NAE1Q13564 534 aa7.1□□□□□ -1.27
CCDC171-201ENST00000380701 DLG2Q15700 870 aa7.1□□□□□ -1.27
CCDC171-201ENST00000380701 OTUD3Q5T2D3 398 aaPredicted RBP7.1□□□□□ -1.27
CCDC171-201ENST00000380701 ABRAXAS1Q6UWZ7 409 aa7.1□□□□□ -1.27
CCDC171-201ENST00000380701 CUZD1Q86UP6 607 aa7.1□□□□□ -1.27
CCDC171-201ENST00000380701 OR8H2Q8N162 312 aa7.1□□□□□ -1.27
CCDC171-201ENST00000380701 LIX1Q8N485 282 aa7.1□□□□□ -1.27
CCDC171-201ENST00000380701 DCAF4L2Q8NA75 395 aa7.1□□□□□ -1.27
CCDC171-201ENST00000380701 OR2T12Q8NG77 320 aa7.1□□□□□ -1.27
CCDC171-201ENST00000380701 PIGXQ8TBF5 258 aa7.1□□□□□ -1.27
CCDC171-201ENST00000380701 ADAMTS18Q8TE60 1221 aa7.1□□□□□ -1.27
CCDC171-201ENST00000380701 NUAK2Q9H093 628 aa7.1□□□□□ -1.27
CCDC171-201ENST00000380701 TDP1Q9NUW8 608 aa7.1□□□□□ -1.27
CCDC171-201ENST00000380701 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.1□□□□□ -1.27
CCDC171-201ENST00000380701 AGPSO00116 658 aa7.1□□□□□ -1.27
CCDC171-201ENST00000380701 NFKBIEO00221 500 aa7.1□□□□□ -1.27
CCDC171-201ENST00000380701 SLC26A3P40879 764 aa7.1□□□□□ -1.27
CCDC171-201ENST00000380701 CDK9P50750 372 aaKnown RBP7.1□□□□□ -1.27
CCDC171-201ENST00000380701 CCR8P51685 355 aa7.1□□□□□ -1.27
CCDC171-201ENST00000380701 KCNC3Q14003 757 aa7.1□□□□□ -1.27
CCDC171-201ENST00000380701 IRGCQ6NXR0 463 aa7.1□□□□□ -1.27
CCDC171-201ENST00000380701 GCNT7Q6ZNI0 430 aa7.1□□□□□ -1.27
CCDC171-201ENST00000380701 LRRC70Q7Z2Q7 622 aa7.1□□□□□ -1.27
CCDC171-201ENST00000380701 YTHDF3Q7Z739 585 aaKnown RBP7.1□□□□□ -1.27
CCDC171-201ENST00000380701 RASGEF1CQ8N431 466 aa7.1□□□□□ -1.27
CCDC171-201ENST00000380701 ACOT12Q8WYK0 555 aa7.1□□□□□ -1.27
CCDC171-201ENST00000380701 FOXJ1Q92949 421 aa7.1□□□□□ -1.27
CCDC171-201ENST00000380701 MCMBPQ9BTE3 642 aa7.1□□□□□ -1.27
CCDC171-201ENST00000380701 SLC29A3Q9BZD2 475 aa7.1□□□□□ -1.27
CCDC171-201ENST00000380701 SDCBP2Q9H190 292 aa7.1□□□□□ -1.27
CCDC171-201ENST00000380701 TFB2MQ9H5Q4 396 aaKnown RBP7.1□□□□□ -1.27
CCDC171-201ENST00000380701 USP29Q9HBJ7 922 aa7.1□□□□□ -1.27
CCDC171-201ENST00000380701 MRPS30Q9NP92 439 aaKnown RBP7.1□□□□□ -1.27
CCDC171-201ENST00000380701 NCDNQ9UBB6 729 aa7.1□□□□□ -1.27
CCDC171-201ENST00000380701 SAMHD1Q9Y3Z3 626 aaKnown RBP7.1□□□□□ -1.27
CCDC171-201ENST00000380701 TLL2Q9Y6L7 1015 aa7.1□□□□□ -1.27
CCDC171-201ENST00000380701 ZNF487B1APH4 448 aa7.1□□□□□ -1.27
CCDC171-201ENST00000380701 TISP43B9A030 160 aa7.1□□□□□ -1.27
CCDC171-201ENST00000380701 KMOO15229 486 aa7.1□□□□□ -1.27
CCDC171-201ENST00000380701 NPHS1O60500 1241 aa7.1□□□□□ -1.27
CCDC171-201ENST00000380701 TULP3O75386 442 aa7.1□□□□□ -1.27
CCDC171-201ENST00000380701 ANXA4P09525 319 aaPredicted RBP7.1□□□□□ -1.27
CCDC171-201ENST00000380701 CPN2P22792 545 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms