RNA–Protein interactions for RNA: ENST00000380075.6

TRIM54-202, Transcript of tripartite motif containing 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM54, Length 1,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-202ENST00000380075 GIPC1O14908 333 aa21.3■■□□□ 1
TRIM54-202ENST00000380075 ARSAP15289 507 aa21.3■■□□□ 1
TRIM54-202ENST00000380075 ZNF7P17097 686 aaPredicted RBP21.3■■□□□ 1
TRIM54-202ENST00000380075 FOXA1P55317 472 aa21.3■■□□□ 1
TRIM54-202ENST00000380075 BCL2L1Q07817 233 aa21.3■■□□□ 1
TRIM54-202ENST00000380075 SFT2D3Q587I9 215 aa21.3■■□□□ 1
TRIM54-202ENST00000380075 LYPLAL1Q5VWZ2 237 aa21.3■■□□□ 1
TRIM54-202ENST00000380075 SYCE2Q6PIF2 218 aa21.3■■□□□ 1
TRIM54-202ENST00000380075 PAOXQ6QHF9 649 aa21.3■■□□□ 1
TRIM54-202ENST00000380075 LYSMD3Q7Z3D4 306 aa21.3■■□□□ 1
TRIM54-202ENST00000380075 PCDH20Q8N6Y1 951 aaKnown RBP21.3■■□□□ 1
TRIM54-202ENST00000380075 ICA1LQ8NDH6 482 aa21.3■■□□□ 1
TRIM54-202ENST00000380075 WFDC5Q8TCV5 224 aa21.3■■□□□ 1
TRIM54-202ENST00000380075 DDI1Q8WTU0 396 aa21.3■■□□□ 1
TRIM54-202ENST00000380075 EEF1AKMT1Q8WVE0 214 aa21.3■■□□□ 1
TRIM54-202ENST00000380075 TUBGCP3Q96CW5 907 aa21.3■■□□□ 1
TRIM54-202ENST00000380075 FBRSL1Q9HCM7 1045 aaKnown RBP21.3■■□□□ 1
TRIM54-202ENST00000380075 SDR39U1Q9NRG7 319 aaPredicted RBP21.3■■□□□ 1
TRIM54-202ENST00000380075 DZANK1Q9NVP4 752 aa21.3■■□□□ 1
TRIM54-202ENST00000380075 KIAA1522Q9P206 1035 aaPredicted RBP21.3■■□□□ 1
TRIM54-202ENST00000380075 TMEM181Q9P2C4 612 aa21.3■■□□□ 1
TRIM54-202ENST00000380075 POLG2Q9UHN1 485 aa21.3■■□□□ 1
TRIM54-202ENST00000380075 APPL1Q9UKG1 709 aa21.3■■□□□ 1
TRIM54-202ENST00000380075 A0A0J9YYE9 177 aa21.29■■□□□ 1
TRIM54-202ENST00000380075 PRSS51A0A1B0GVH4 220 aa21.29■■□□□ 1
TRIM54-202ENST00000380075 C8BP07358 591 aa21.29■■□□□ 1
TRIM54-202ENST00000380075 PFKLP17858 780 aa21.29■■□□□ 1
TRIM54-202ENST00000380075 CLCN7P51798 805 aa21.29■■□□□ 1
TRIM54-202ENST00000380075 ZXDBP98169 803 aa21.29■■□□□ 1
TRIM54-202ENST00000380075 TMC5Q6UXY8 1006 aa21.29■■□□□ 1
TRIM54-202ENST00000380075 FUNDC1Q8IVP5 155 aa21.29■■□□□ 1
TRIM54-202ENST00000380075 CHCHD4Q8N4Q1 142 aa21.29■■□□□ 1
TRIM54-202ENST00000380075 ADCY4Q8NFM4 1077 aa21.29■■□□□ 1
TRIM54-202ENST00000380075 HOPXQ9BPY8 73 aaPredicted RBP21.29■■□□□ 1
TRIM54-202ENST00000380075 TUBB1Q9H4B7 451 aa21.29■■□□□ 1
TRIM54-202ENST00000380075 SEMA4BQ9NPR2 832 aaPredicted RBP21.29■■□□□ 1
TRIM54-202ENST00000380075 DLGAP2Q9P1A6 1054 aa21.29■■□□□ 1
TRIM54-202ENST00000380075 PDP2Q9P2J9 529 aa21.29■■□□□ 1
TRIM54-202ENST00000380075 SH3BP1Q9Y3L3 701 aa21.29■■□□□ 1
TRIM54-202ENST00000380075 DTNAQ9Y4J8 743 aa21.29■■□□□ 1
TRIM54-202ENST00000380075 BPTFQ12830 3046 aa21.29■■□□□ 1
TRIM54-202ENST00000380075 CCL16O15467 120 aa21.28■■□□□ 1
TRIM54-202ENST00000380075 MT-CO1P00395 513 aa21.28■■□□□ 1
TRIM54-202ENST00000380075 PRR35P0CG20 571 aa21.28■■□□□ 1
TRIM54-202ENST00000380075 GABRR2P28476 465 aa21.28■■□□□ 1
TRIM54-202ENST00000380075 MED21Q13503 144 aa21.28■■□□□ 1
TRIM54-202ENST00000380075 GRAMD1BQ3KR37 738 aa21.28■■□□□ 1
TRIM54-202ENST00000380075 ELMSAN1Q6PJG2 1045 aa21.28■■□□□ 1
TRIM54-202ENST00000380075 ADAMTSL2Q86TH1 951 aa21.28■■□□□ 1
TRIM54-202ENST00000380075 CPNE9Q8IYJ1 553 aa21.28■■□□□ 1
TRIM54-202ENST00000380075 RNF148Q8N7C7 305 aa21.28■■□□□ 1
TRIM54-202ENST00000380075 EBF3Q9H4W6 596 aa21.28■■□□□ 1
TRIM54-202ENST00000380075 SFXN1Q9H9B4 322 aa21.28■■□□□ 1
TRIM54-202ENST00000380075 ZFYVE1Q9HBF4 777 aa21.28■■□□□ 1
TRIM54-202ENST00000380075 TMEM45AQ9NWC5 275 aa21.28■■□□□ 1
TRIM54-202ENST00000380075 CD274Q9NZQ7 290 aa21.28■■□□□ 1
TRIM54-202ENST00000380075 CD300AQ9UGN4 299 aa21.28■■□□□ 1
TRIM54-202ENST00000380075 TNPO3Q9Y5L0 923 aaKnown RBP21.28■■□□□ 1
TRIM54-202ENST00000380075 DPPA5A6NC42 116 aa21.28■■□□□ 1
TRIM54-202ENST00000380075 H3BQ06 376 aaPredicted RBP21.28■■□□□ 1
TRIM54-202ENST00000380075 IGSF6O95976 241 aa21.28■■□□□ 1
TRIM54-202ENST00000380075 TRBC1P01850 177 aa21.28■■□□□ 1
TRIM54-202ENST00000380075 HGFP14210 728 aa21.28■■□□□ 1
TRIM54-202ENST00000380075 LRRC36Q1X8D7 754 aa21.28■■□□□ 1
TRIM54-202ENST00000380075 SPATS1Q496A3 300 aa21.28■■□□□ 1
TRIM54-202ENST00000380075 SNX20Q7Z614 316 aa21.28■■□□□ 1
TRIM54-202ENST00000380075 APCDD1Q8J025 514 aa21.28■■□□□ 1
TRIM54-202ENST00000380075 RBFAQ8N0V3 343 aa21.28■■□□□ 1
TRIM54-202ENST00000380075 OR9I1Q8NGQ6 314 aa21.28■■□□□ 1
TRIM54-202ENST00000380075 FIBINQ8TAL6 211 aa21.28■■□□□ 1
TRIM54-202ENST00000380075 PIP4K2CQ8TBX8 421 aa21.28■■□□□ 1
TRIM54-202ENST00000380075 MSLNLQ96KJ4 702 aa21.28■■□□□ 1
TRIM54-202ENST00000380075 ZNF382Q96SR6 550 aa21.28■■□□□ 1
TRIM54-202ENST00000380075 HGH1Q9BTY7 390 aa21.28■■□□□ 1
TRIM54-202ENST00000380075 TM6SF2Q9BZW4 377 aa21.28■■□□□ 1
TRIM54-202ENST00000380075 CLPBQ9H078 707 aa21.28■■□□□ 1
TRIM54-202ENST00000380075 UBE2ZQ9H832 354 aaPredicted RBP21.28■■□□□ 1
TRIM54-202ENST00000380075 RIMS3Q9UJD0 308 aa21.28■■□□□ 1
TRIM54-202ENST00000380075 GNPTGQ9UJJ9 305 aa21.28■■□□□ 1
TRIM54-202ENST00000380075 C5orf42Q9H799 3197 aa21.27■■□□□ 1
TRIM54-202ENST00000380075 STAMBPO95630 424 aa21.27■■□□□ 1
TRIM54-202ENST00000380075 LRG1P02750 347 aa21.27■■□□□ 1
TRIM54-202ENST00000380075 CAPNS1P04632 268 aa21.27■■□□□ 1
TRIM54-202ENST00000380075 CKMP06732 381 aa21.27■■□□□ 1
TRIM54-202ENST00000380075 LYNP07948 512 aa21.27■■□□□ 1
TRIM54-202ENST00000380075 ITGALP20701 1170 aa21.27■■□□□ 1
TRIM54-202ENST00000380075 AQP4P55087 323 aa21.27■■□□□ 1
TRIM54-202ENST00000380075 IRAK1BP1Q5VVH5 260 aa21.27■■□□□ 1
TRIM54-202ENST00000380075 SPATA24Q86W54 205 aa21.27■■□□□ 1
TRIM54-202ENST00000380075 CAMK1DQ8IU85 385 aa21.27■■□□□ 1
TRIM54-202ENST00000380075 ZNF707Q96C28 371 aaPredicted RBP21.27■■□□□ 1
TRIM54-202ENST00000380075 EID2BQ96D98 161 aa21.27■■□□□ 1
TRIM54-202ENST00000380075 DUS3LQ96G46 650 aaKnown RBP21.27■■□□□ 1
TRIM54-202ENST00000380075 KCNA7Q96RP8 456 aa21.27■■□□□ 1
TRIM54-202ENST00000380075 ATP13A3Q9H7F0 1226 aa21.27■■□□□ 1
TRIM54-202ENST00000380075 ABCB8Q9NUT2 735 aa21.27■■□□□ 1
TRIM54-202ENST00000380075 FNDC3AQ9Y2H6 1198 aaKnown RBP21.27■■□□□ 1
TRIM54-202ENST00000380075 PRAMEF1O95521 474 aa21.27■□□□□ 0.99
TRIM54-202ENST00000380075 LINC00032P0C843 101 aa21.27■□□□□ 0.99
TRIM54-202ENST00000380075 CTPS1P17812 591 aa21.27■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms