RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 VAPBO95292 243 aa6.48□□□□□ -1.37
NEDD9-202ENST00000379446 ME2P23368 584 aa6.48□□□□□ -1.37
NEDD9-202ENST00000379446 RIPK1Q13546 671 aa6.48□□□□□ -1.37
NEDD9-202ENST00000379446 ZNF423Q2M1K9 1284 aa6.48□□□□□ -1.37
NEDD9-202ENST00000379446 HORMAD1Q86X24 394 aa6.48□□□□□ -1.37
NEDD9-202ENST00000379446 ADGRG2Q8IZP9 1017 aa6.48□□□□□ -1.37
NEDD9-202ENST00000379446 TRIML2Q8N7C3 387 aa6.48□□□□□ -1.37
NEDD9-202ENST00000379446 CAPSLQ8WWF8 208 aa6.48□□□□□ -1.37
NEDD9-202ENST00000379446 ASZ1Q8WWH4 475 aa6.48□□□□□ -1.37
NEDD9-202ENST00000379446 ACOX2Q99424 681 aa6.48□□□□□ -1.37
NEDD9-202ENST00000379446 PAFAH2Q99487 392 aa6.48□□□□□ -1.37
NEDD9-202ENST00000379446 CFHR5Q9BXR6 569 aa6.48□□□□□ -1.37
NEDD9-202ENST00000379446 TXLNGYQ9BZA5 131 aa6.48□□□□□ -1.37
NEDD9-202ENST00000379446 TWSG1Q9GZX9 223 aa6.48□□□□□ -1.37
NEDD9-202ENST00000379446 PNO1Q9NRX1 252 aaKnown RBP6.48□□□□□ -1.37
NEDD9-202ENST00000379446 MAFFQ9ULX9 164 aa6.48□□□□□ -1.37
NEDD9-202ENST00000379446 SLC12A4Q9UP95 1085 aa6.48□□□□□ -1.37
NEDD9-202ENST00000379446 LOC100653049A0A140TA62 436 aa6.48□□□□□ -1.37
NEDD9-202ENST00000379446 UPK3BL1B0FP48 263 aa6.48□□□□□ -1.37
NEDD9-202ENST00000379446 UPK3BL2E5RIL1 263 aa6.48□□□□□ -1.37
NEDD9-202ENST00000379446 GOLGA8TH3BQL2 631 aa6.48□□□□□ -1.37
NEDD9-202ENST00000379446 RNF103O00237 685 aa6.48□□□□□ -1.37
NEDD9-202ENST00000379446 YKT6O15498 198 aa6.48□□□□□ -1.37
NEDD9-202ENST00000379446 ECI2O75521 394 aa6.48□□□□□ -1.37
NEDD9-202ENST00000379446 KRT34O76011 436 aa6.48□□□□□ -1.37
NEDD9-202ENST00000379446 PDE5AO76074 875 aa6.48□□□□□ -1.37
NEDD9-202ENST00000379446 GOT1P17174 413 aa6.48□□□□□ -1.37
NEDD9-202ENST00000379446 NCF2P19878 526 aaPredicted RBP6.48□□□□□ -1.37
NEDD9-202ENST00000379446 CES1P23141 567 aa6.48□□□□□ -1.37
NEDD9-202ENST00000379446 CCKBRP32239 447 aa6.48□□□□□ -1.37
NEDD9-202ENST00000379446 FDFT1P37268 417 aa6.48□□□□□ -1.37
NEDD9-202ENST00000379446 ANXA11P50995 505 aaKnown RBP6.48□□□□□ -1.37
NEDD9-202ENST00000379446 SOX4Q06945 474 aaPredicted RBP6.48□□□□□ -1.37
NEDD9-202ENST00000379446 DLX2Q07687 328 aaPredicted RBP6.48□□□□□ -1.37
NEDD9-202ENST00000379446 CDH17Q12864 832 aa6.48□□□□□ -1.37
NEDD9-202ENST00000379446 BNIP1Q12981 228 aa6.48□□□□□ -1.37
NEDD9-202ENST00000379446 KLHL38Q2WGJ6 581 aa6.48□□□□□ -1.37
NEDD9-202ENST00000379446 DEFB109BQ30KR1 87 aa6.48□□□□□ -1.37
NEDD9-202ENST00000379446 SLC39A4Q6P5W5 647 aa6.48□□□□□ -1.37
NEDD9-202ENST00000379446 TAGAPQ8N103 731 aa6.48□□□□□ -1.37
NEDD9-202ENST00000379446 OR10T2Q8NGX3 314 aa6.48□□□□□ -1.37
NEDD9-202ENST00000379446 HEXDCQ8WVB3 486 aa6.48□□□□□ -1.37
NEDD9-202ENST00000379446 ZNF516Q92618 1163 aa6.48□□□□□ -1.37
NEDD9-202ENST00000379446 TEX12Q9BXU0 123 aa6.48□□□□□ -1.37
NEDD9-202ENST00000379446 ANKHQ9HCJ1 492 aa6.48□□□□□ -1.37
NEDD9-202ENST00000379446 IARS2Q9NSE4 1012 aaKnown RBP6.48□□□□□ -1.37
NEDD9-202ENST00000379446 LUZP4Q9P127 313 aa6.48□□□□□ -1.37
NEDD9-202ENST00000379446 RBMX2Q9Y388 322 aaKnown RBP6.48□□□□□ -1.37
NEDD9-202ENST00000379446 TRGV8A0A0C4DH27 118 aa6.48□□□□□ -1.37
NEDD9-202ENST00000379446 TSPAN6O43657 245 aa6.48□□□□□ -1.37
NEDD9-202ENST00000379446 LIASO43766 372 aa6.48□□□□□ -1.37
NEDD9-202ENST00000379446 CILPO75339 1184 aa6.48□□□□□ -1.37
NEDD9-202ENST00000379446 PDGFBP01127 241 aaPredicted RBP6.48□□□□□ -1.37
NEDD9-202ENST00000379446 TPBGLP0DKB5 382 aa6.48□□□□□ -1.37
NEDD9-202ENST00000379446 BMP1P13497 986 aa6.48□□□□□ -1.37
NEDD9-202ENST00000379446 SSR2P43308 183 aa6.48□□□□□ -1.37
NEDD9-202ENST00000379446 POLD2P49005 469 aa6.48□□□□□ -1.37
NEDD9-202ENST00000379446 HADHBP55084 474 aaKnown RBP6.48□□□□□ -1.37
NEDD9-202ENST00000379446 SLC1A5Q15758 541 aa6.48□□□□□ -1.37
NEDD9-202ENST00000379446 CYP1B1Q16678 543 aa6.48□□□□□ -1.37
NEDD9-202ENST00000379446 CCDC92Q53HC0 331 aaPredicted RBP6.48□□□□□ -1.37
NEDD9-202ENST00000379446 TXNRD3NBQ6F5E7 133 aa6.48□□□□□ -1.37
NEDD9-202ENST00000379446 FBXL22Q6P050 247 aa6.48□□□□□ -1.37
NEDD9-202ENST00000379446 FAM92BQ6ZTR7 304 aa6.48□□□□□ -1.37
NEDD9-202ENST00000379446 HFE2Q6ZVN8 426 aa6.48□□□□□ -1.37
NEDD9-202ENST00000379446 NANOGNBQ7Z5D8 188 aa6.48□□□□□ -1.37
NEDD9-202ENST00000379446 TMEM173Q86WV6 379 aaPredicted RBP6.48□□□□□ -1.37
NEDD9-202ENST00000379446 HEATR4Q86WZ0 1026 aa6.48□□□□□ -1.37
NEDD9-202ENST00000379446 C12orf56Q8IXR9 622 aa6.48□□□□□ -1.37
NEDD9-202ENST00000379446 RDH11Q8TC12 318 aa6.48□□□□□ -1.37
NEDD9-202ENST00000379446 TCP10LQ8TDR4 215 aa6.48□□□□□ -1.37
NEDD9-202ENST00000379446 FRS2Q8WU20 508 aa6.48□□□□□ -1.37
NEDD9-202ENST00000379446 ELSPBP1Q96BH3 223 aa6.48□□□□□ -1.37
NEDD9-202ENST00000379446 SDCCAG3Q96C92 435 aa6.48□□□□□ -1.37
NEDD9-202ENST00000379446 SLC2A11Q9BYW1 496 aa6.48□□□□□ -1.37
NEDD9-202ENST00000379446 LRRC40Q9H9A6 602 aa6.48□□□□□ -1.37
NEDD9-202ENST00000379446 APOBEC3GQ9HC16 384 aaKnown RBP6.48□□□□□ -1.37
NEDD9-202ENST00000379446 TAS2R13Q9NYV9 303 aa6.48□□□□□ -1.37
NEDD9-202ENST00000379446 NOX1Q9Y5S8 564 aa6.48□□□□□ -1.37
NEDD9-202ENST00000379446 IQCF5A8MTL0 148 aa6.48□□□□□ -1.37
NEDD9-202ENST00000379446 ATP5HO75947 161 aa6.48□□□□□ -1.37
NEDD9-202ENST00000379446 OR2B3O76000 313 aa6.48□□□□□ -1.37
NEDD9-202ENST00000379446 SEC24AO95486 1093 aa6.48□□□□□ -1.37
NEDD9-202ENST00000379446 RPLP0P05388 317 aaKnown RBP6.48□□□□□ -1.37
NEDD9-202ENST00000379446 BGNP21810 368 aa6.48□□□□□ -1.37
NEDD9-202ENST00000379446 GKP32189 559 aa6.48□□□□□ -1.37
NEDD9-202ENST00000379446 SPAM1P38567 509 aa6.48□□□□□ -1.37
NEDD9-202ENST00000379446 PRIM2P49643 509 aa6.48□□□□□ -1.37
NEDD9-202ENST00000379446 WDR4P57081 412 aaKnown RBP6.48□□□□□ -1.37
NEDD9-202ENST00000379446 GABREP78334 506 aa6.48□□□□□ -1.37
NEDD9-202ENST00000379446 PLIN5Q00G26 463 aa6.48□□□□□ -1.37
NEDD9-202ENST00000379446 HHEXQ03014 270 aa6.48□□□□□ -1.37
NEDD9-202ENST00000379446 ADGRE1Q14246 886 aa6.48□□□□□ -1.37
NEDD9-202ENST00000379446 ALG11Q2TAA5 492 aa6.48□□□□□ -1.37
NEDD9-202ENST00000379446 FAM214AQ32MH5 1076 aa6.48□□□□□ -1.37
NEDD9-202ENST00000379446 ALFQ53S48 1182 aa6.48□□□□□ -1.37
NEDD9-202ENST00000379446 ATAD3BQ5T9A4 648 aa6.48□□□□□ -1.37
NEDD9-202ENST00000379446 PMF1Q6P1K2 205 aa6.48□□□□□ -1.37
NEDD9-202ENST00000379446 BRAT1Q6PJG6 821 aa6.48□□□□□ -1.37
NEDD9-202ENST00000379446 CLEC20AQ6ZU45 233 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms