RNA–Protein interactions for RNA: ENST00000378572.7

PRPF18-202, Transcript of pre-mRNA processing factor 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF18, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-202ENST00000378572 TRIM23P36406 574 aa13.62□□□□□ -0.23
PRPF18-202ENST00000378572 ETV5P41161 510 aa13.62□□□□□ -0.23
PRPF18-202ENST00000378572 GPR1P46091 355 aa13.62□□□□□ -0.23
PRPF18-202ENST00000378572 EPHB1P54762 984 aa13.62□□□□□ -0.23
PRPF18-202ENST00000378572 SARNPP82979 210 aaKnown RBP13.62□□□□□ -0.23
PRPF18-202ENST00000378572 CDK3Q00526 305 aa13.62□□□□□ -0.23
PRPF18-202ENST00000378572 SRSF6Q13247 344 aaKnown RBP13.62□□□□□ -0.23
PRPF18-202ENST00000378572 SLC14A2Q15849 920 aa13.62□□□□□ -0.23
PRPF18-202ENST00000378572 KCTD11Q693B1 232 aa13.62□□□□□ -0.23
PRPF18-202ENST00000378572 TMC3Q7Z5M5 1100 aa13.62□□□□□ -0.23
PRPF18-202ENST00000378572 ZFAND4Q86XD8 727 aa13.62□□□□□ -0.23
PRPF18-202ENST00000378572 NDUFAF2Q8N183 169 aa13.62□□□□□ -0.23
PRPF18-202ENST00000378572 PGBD5Q8N414 524 aa13.62□□□□□ -0.23
PRPF18-202ENST00000378572 SGF29Q96ES7 293 aa13.62□□□□□ -0.23
PRPF18-202ENST00000378572 NSMCE3Q96MG7 304 aa13.62□□□□□ -0.23
PRPF18-202ENST00000378572 MGME1Q9BQP7 344 aa13.62□□□□□ -0.23
PRPF18-202ENST00000378572 GORASP1Q9BQQ3 440 aa13.62□□□□□ -0.23
PRPF18-202ENST00000378572 FAM117AQ9C073 453 aa13.62□□□□□ -0.23
PRPF18-202ENST00000378572 CDH19Q9H159 772 aa13.62□□□□□ -0.23
PRPF18-202ENST00000378572 SEMA6CQ9H3T2 930 aa13.62□□□□□ -0.23
PRPF18-202ENST00000378572 SPATS2LQ9NUQ6 558 aaKnown RBP13.62□□□□□ -0.23
PRPF18-202ENST00000378572 FOXJ2Q9P0K8 574 aa13.62□□□□□ -0.23
PRPF18-202ENST00000378572 AAR2Q9Y312 384 aaKnown RBP13.62□□□□□ -0.23
PRPF18-202ENST00000378572 TCRBV7S3A2A0A539 114 aa13.61□□□□□ -0.23
PRPF18-202ENST00000378572 NPIPB15A6NHN6 443 aaPredicted RBP13.61□□□□□ -0.23
PRPF18-202ENST00000378572 B8ZZF3 427 aa13.61□□□□□ -0.23
PRPF18-202ENST00000378572 E7ESA3 106 aa13.61□□□□□ -0.23
PRPF18-202ENST00000378572 HTRA2O43464 458 aaPredicted RBP13.61□□□□□ -0.23
PRPF18-202ENST00000378572 ANXA9O76027 345 aa13.61□□□□□ -0.23
PRPF18-202ENST00000378572 SUN1O94901 812 aa13.61□□□□□ -0.23
PRPF18-202ENST00000378572 AP2A1O95782 977 aa13.61□□□□□ -0.23
PRPF18-202ENST00000378572 MLNP12872 115 aa13.61□□□□□ -0.23
PRPF18-202ENST00000378572 LHCGRP22888 699 aa13.61□□□□□ -0.23
PRPF18-202ENST00000378572 ACTR1BP42025 376 aa13.61□□□□□ -0.23
PRPF18-202ENST00000378572 POLD2P49005 469 aa13.61□□□□□ -0.23
PRPF18-202ENST00000378572 ACTR1AP61163 376 aa13.61□□□□□ -0.23
PRPF18-202ENST00000378572 NFATC3Q12968 1075 aa13.61□□□□□ -0.23
PRPF18-202ENST00000378572 PEX6Q13608 980 aa13.61□□□□□ -0.23
PRPF18-202ENST00000378572 Q6ZVL8 140 aa13.61□□□□□ -0.23
PRPF18-202ENST00000378572 MARK2Q7KZI7 788 aaKnown RBP13.61□□□□□ -0.23
PRPF18-202ENST00000378572 TSPAN33Q86UF1 283 aa13.61□□□□□ -0.23
PRPF18-202ENST00000378572 RCBTB1Q8NDN9 531 aa13.61□□□□□ -0.23
PRPF18-202ENST00000378572 JPH3Q8WXH2 748 aaPredicted RBP13.61□□□□□ -0.23
PRPF18-202ENST00000378572 POLR1EQ9GZS1 481 aaKnown RBP13.61□□□□□ -0.23
PRPF18-202ENST00000378572 XAB2Q9HCS7 855 aaKnown RBP13.61□□□□□ -0.23
PRPF18-202ENST00000378572 UNC13CQ8NB66 2214 aa13.61□□□□□ -0.23
PRPF18-202ENST00000378572 NVLO15381 856 aaKnown RBP13.61□□□□□ -0.23
PRPF18-202ENST00000378572 EFSO43281 561 aa13.61□□□□□ -0.23
PRPF18-202ENST00000378572 PGLSO95336 258 aa13.61□□□□□ -0.23
PRPF18-202ENST00000378572 CEACAM5P06731 702 aa13.61□□□□□ -0.23
PRPF18-202ENST00000378572 CES1P23141 567 aa13.61□□□□□ -0.23
PRPF18-202ENST00000378572 GEMP55040 296 aa13.61□□□□□ -0.23
PRPF18-202ENST00000378572 ARL4CP56559 192 aa13.61□□□□□ -0.23
PRPF18-202ENST00000378572 ZFP36L1Q07352 338 aaKnown RBP13.61□□□□□ -0.23
PRPF18-202ENST00000378572 DHX9Q08211 1270 aaKnown RBP13.61□□□□□ -0.23
PRPF18-202ENST00000378572 MPP3Q13368 585 aa13.61□□□□□ -0.23
PRPF18-202ENST00000378572 C16orf72Q14CZ0 275 aa13.61□□□□□ -0.23
PRPF18-202ENST00000378572 PTPRRQ15256 657 aa13.61□□□□□ -0.23
PRPF18-202ENST00000378572 HIF1AQ16665 826 aa13.61□□□□□ -0.23
PRPF18-202ENST00000378572 CENPUQ71F23 418 aa13.61□□□□□ -0.23
PRPF18-202ENST00000378572 TMPRSS9Q7Z410 1059 aa13.61□□□□□ -0.23
PRPF18-202ENST00000378572 SLITRK4Q8IW52 837 aa13.61□□□□□ -0.23
PRPF18-202ENST00000378572 PDIK1LQ8N165 341 aa13.61□□□□□ -0.23
PRPF18-202ENST00000378572 TAB3Q8N5C8 712 aaPredicted RBP13.61□□□□□ -0.23
PRPF18-202ENST00000378572 GPBAR1Q8TDU6 330 aa13.61□□□□□ -0.23
PRPF18-202ENST00000378572 PATE1Q8WXA2 126 aa13.61□□□□□ -0.23
PRPF18-202ENST00000378572 EXTL1Q92935 676 aa13.61□□□□□ -0.23
PRPF18-202ENST00000378572 TADA1Q96BN2 335 aa13.61□□□□□ -0.23
PRPF18-202ENST00000378572 AP2M1Q96CW1 435 aa13.61□□□□□ -0.23
PRPF18-202ENST00000378572 IMP4Q96G21 291 aaKnown RBP13.61□□□□□ -0.23
PRPF18-202ENST00000378572 CCDC74BQ96LY2 380 aa13.61□□□□□ -0.23
PRPF18-202ENST00000378572 SEMA3CQ99985 751 aa13.61□□□□□ -0.23
PRPF18-202ENST00000378572 NUDT22Q9BRQ3 303 aa13.61□□□□□ -0.23
PRPF18-202ENST00000378572 MLPHQ9BV36 600 aaPredicted RBP13.61□□□□□ -0.23
PRPF18-202ENST00000378572 TEX101Q9BY14 249 aa13.61□□□□□ -0.23
PRPF18-202ENST00000378572 LRRC40Q9H9A6 602 aa13.61□□□□□ -0.23
PRPF18-202ENST00000378572 TRNAU1APQ9NX07 287 aaKnown RBP13.61□□□□□ -0.23
PRPF18-202ENST00000378572 SSUH2Q9Y2M2 353 aa13.61□□□□□ -0.23
PRPF18-202ENST00000378572 SETXQ7Z333 2677 aaKnown RBP13.6□□□□□ -0.23
PRPF18-202ENST00000378572 AP3B1O00203 1094 aa13.6□□□□□ -0.23
PRPF18-202ENST00000378572 PSMD11O00231 422 aa13.6□□□□□ -0.23
PRPF18-202ENST00000378572 ATP8B1O43520 1251 aa13.6□□□□□ -0.23
PRPF18-202ENST00000378572 ASMTLO95671 621 aa13.6□□□□□ -0.23
PRPF18-202ENST00000378572 FGF1P05230 155 aa13.6□□□□□ -0.23
PRPF18-202ENST00000378572 CR2P20023 1033 aa13.6□□□□□ -0.23
PRPF18-202ENST00000378572 MAGEA3P43357 314 aa13.6□□□□□ -0.23
PRPF18-202ENST00000378572 LMAN1P49257 510 aa13.6□□□□□ -0.23
PRPF18-202ENST00000378572 B4GALNT1Q00973 533 aa13.6□□□□□ -0.23
PRPF18-202ENST00000378572 CTBSQ01459 385 aa13.6□□□□□ -0.23
PRPF18-202ENST00000378572 RALGPS1Q5JS13 557 aa13.6□□□□□ -0.23
PRPF18-202ENST00000378572 FAM182AQ5T1J6 154 aa13.6□□□□□ -0.23
PRPF18-202ENST00000378572 LRRC66Q68CR7 880 aa13.6□□□□□ -0.23
PRPF18-202ENST00000378572 TRIM74Q86UV6 250 aa13.6□□□□□ -0.23
PRPF18-202ENST00000378572 OXNAD1Q96HP4 312 aaPredicted RBP13.6□□□□□ -0.23
PRPF18-202ENST00000378572 SERPINB12Q96P63 405 aa13.6□□□□□ -0.23
PRPF18-202ENST00000378572 OR2M4Q96R27 311 aa13.6□□□□□ -0.23
PRPF18-202ENST00000378572 TMEM98Q9Y2Y6 226 aa13.6□□□□□ -0.23
PRPF18-202ENST00000378572 COL6A6A6NMZ7 2263 aa13.6□□□□□ -0.23
PRPF18-202ENST00000378572 SCN8AQ9UQD0 1980 aa13.59□□□□□ -0.23
PRPF18-202ENST00000378572 PIEZO2Q9H5I5 2752 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms