RNA–Protein interactions for RNA: ENST00000377902.5

GNE-201, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 2,565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-201ENST00000377902 ZC3H15Q8WU90 426 aaKnown RBP17.82■□□□□ 0.44
GNE-201ENST00000377902 TRUB1Q8WWH5 349 aaKnown RBP17.82■□□□□ 0.44
GNE-201ENST00000377902 CYP2S1Q96SQ9 504 aa17.82■□□□□ 0.44
GNE-201ENST00000377902 BEGAINQ9BUH8 593 aa17.82■□□□□ 0.44
GNE-201ENST00000377902 FUNDC2Q9BWH2 189 aa17.82■□□□□ 0.44
GNE-201ENST00000377902 SUN2Q9UH99 717 aa17.82■□□□□ 0.44
GNE-201ENST00000377902 EIF2B4Q9UI10 523 aaKnown RBP17.82■□□□□ 0.44
GNE-201ENST00000377902 PTGES3LE9PB15 166 aa17.81■□□□□ 0.44
GNE-201ENST00000377902 ABCB7O75027 752 aa17.81■□□□□ 0.44
GNE-201ENST00000377902 RPP40O75818 363 aaKnown RBP17.81■□□□□ 0.44
GNE-201ENST00000377902 RPS17P08708 135 aaKnown RBP17.81■□□□□ 0.44
GNE-201ENST00000377902 PRKACGP22612 351 aa17.81■□□□□ 0.44
GNE-201ENST00000377902 PTPRRQ15256 657 aa17.81■□□□□ 0.44
GNE-201ENST00000377902 RBM23Q86U06 439 aaKnown RBP17.81■□□□□ 0.44
GNE-201ENST00000377902 HID1Q8IV36 788 aa17.81■□□□□ 0.44
GNE-201ENST00000377902 ZNF683Q8IZ20 524 aa17.81■□□□□ 0.44
GNE-201ENST00000377902 ABI1Q8IZP0 508 aa17.81■□□□□ 0.44
GNE-201ENST00000377902 FIG4Q92562 907 aa17.81■□□□□ 0.44
GNE-201ENST00000377902 AMBRA1Q9C0C7 1298 aa17.81■□□□□ 0.44
GNE-201ENST00000377902 PCTPQ9UKL6 214 aa17.81■□□□□ 0.44
GNE-201ENST00000377902 C17orf102A2RUQ5 167 aa17.81■□□□□ 0.44
GNE-201ENST00000377902 TRIM43BA6NCK2 446 aa17.81■□□□□ 0.44
GNE-201ENST00000377902 G6PDP11413 515 aa17.81■□□□□ 0.44
GNE-201ENST00000377902 CDH1P12830 882 aa17.81■□□□□ 0.44
GNE-201ENST00000377902 CDH3P22223 829 aa17.81■□□□□ 0.44
GNE-201ENST00000377902 FSHRP23945 695 aa17.81■□□□□ 0.44
GNE-201ENST00000377902 HTR1BP28222 390 aa17.81■□□□□ 0.44
GNE-201ENST00000377902 HTR6P50406 440 aa17.81■□□□□ 0.44
GNE-201ENST00000377902 GSTM4Q03013 218 aa17.81■□□□□ 0.44
GNE-201ENST00000377902 PERM1Q5SV97 790 aa17.81■□□□□ 0.44
GNE-201ENST00000377902 RAP1GAP2Q684P5 730 aa17.81■□□□□ 0.44
GNE-201ENST00000377902 MSANTD2Q6P1R3 559 aa17.81■□□□□ 0.44
GNE-201ENST00000377902 NCCRP1Q6ZVX7 275 aaPredicted RBP17.81■□□□□ 0.44
GNE-201ENST00000377902 THAP5Q7Z6K1 395 aa17.81■□□□□ 0.44
GNE-201ENST00000377902 PARP8Q8N3A8 854 aa17.81■□□□□ 0.44
GNE-201ENST00000377902 TMCO5AQ8N6Q1 288 aa17.81■□□□□ 0.44
GNE-201ENST00000377902 ABHD11Q8NFV4 315 aa17.81■□□□□ 0.44
GNE-201ENST00000377902 ITCHQ96J02 903 aa17.81■□□□□ 0.44
GNE-201ENST00000377902 YTHDF1Q9BYJ9 559 aaKnown RBP17.81■□□□□ 0.44
GNE-201ENST00000377902 BRINP2Q9C0B6 783 aa17.81■□□□□ 0.44
GNE-201ENST00000377902 PRDM5Q9NQX1 630 aaPredicted RBP17.81■□□□□ 0.44
GNE-201ENST00000377902 C8orf4Q9NR00 106 aa17.81■□□□□ 0.44
GNE-201ENST00000377902 GMIPQ9P107 970 aa17.81■□□□□ 0.44
GNE-201ENST00000377902 GNPTGQ9UJJ9 305 aa17.81■□□□□ 0.44
GNE-201ENST00000377902 PCDHB3Q9Y5E6 796 aa17.81■□□□□ 0.44
GNE-201ENST00000377902 DICER1Q9UPY3 1922 aaKnown RBP17.8■□□□□ 0.44
GNE-201ENST00000377902 COL4A4P53420 1690 aaPredicted RBP17.8■□□□□ 0.44
GNE-201ENST00000377902 IQCA1LA6NCM1 817 aa17.8■□□□□ 0.44
GNE-201ENST00000377902 OR1I1O60431 355 aa17.8■□□□□ 0.44
GNE-201ENST00000377902 BCAS1O75363 584 aaPredicted RBP17.8■□□□□ 0.44
GNE-201ENST00000377902 INMTO95050 263 aa17.8■□□□□ 0.44
GNE-201ENST00000377902 ESRRBO95718 433 aa17.8■□□□□ 0.44
GNE-201ENST00000377902 ENO2P09104 434 aaPredicted RBP17.8■□□□□ 0.44
GNE-201ENST00000377902 JUNBP17275 347 aaPredicted RBP17.8■□□□□ 0.44
GNE-201ENST00000377902 GRB14Q14449 540 aa17.8■□□□□ 0.44
GNE-201ENST00000377902 DDR2Q16832 855 aa17.8■□□□□ 0.44
GNE-201ENST00000377902 OVOS1Q6IE37 1185 aa17.8■□□□□ 0.44
GNE-201ENST00000377902 METTL23Q86XA0 190 aa17.8■□□□□ 0.44
GNE-201ENST00000377902 PROSER1Q86XN7 944 aa17.8■□□□□ 0.44
GNE-201ENST00000377902 MIB1Q86YT6 1006 aa17.8■□□□□ 0.44
GNE-201ENST00000377902 SIDT2Q8NBJ9 832 aaKnown RBP17.8■□□□□ 0.44
GNE-201ENST00000377902 FKBP10Q96AY3 582 aa17.8■□□□□ 0.44
GNE-201ENST00000377902 CDKN2AIPNLQ96HQ2 116 aa17.8■□□□□ 0.44
GNE-201ENST00000377902 NSMCE3Q96MG7 304 aa17.8■□□□□ 0.44
GNE-201ENST00000377902 ZBED2Q9BTP6 218 aa17.8■□□□□ 0.44
GNE-201ENST00000377902 ZYG11BQ9C0D3 744 aa17.8■□□□□ 0.44
GNE-201ENST00000377902 MUC13Q9H3R2 512 aa17.8■□□□□ 0.44
GNE-201ENST00000377902 ACTL8Q9H568 366 aa17.8■□□□□ 0.44
GNE-201ENST00000377902 FLRT1Q9NZU1 646 aa17.8■□□□□ 0.44
GNE-201ENST00000377902 SLC30A1Q9Y6M5 507 aa17.8■□□□□ 0.44
GNE-201ENST00000377902 ERVK-8P63133 956 aa17.8■□□□□ 0.44
GNE-201ENST00000377902 ACVR1Q04771 509 aa17.8■□□□□ 0.44
GNE-201ENST00000377902 EFEMP1Q12805 493 aa17.8■□□□□ 0.44
GNE-201ENST00000377902 LAIR2Q6ISS4 152 aa17.8■□□□□ 0.44
GNE-201ENST00000377902 PNPT1Q8TCS8 783 aaKnown RBP17.8■□□□□ 0.44
GNE-201ENST00000377902 RAB2BQ8WUD1 216 aa17.8■□□□□ 0.44
GNE-201ENST00000377902 MBOAT4Q96T53 435 aa17.8■□□□□ 0.44
GNE-201ENST00000377902 RAD21L1Q9H4I0 556 aa17.8■□□□□ 0.44
GNE-201ENST00000377902 FAM118AQ9NWS6 357 aa17.8■□□□□ 0.44
GNE-201ENST00000377902 AASSQ9UDR5 926 aa17.8■□□□□ 0.44
GNE-201ENST00000377902 SPO11Q9Y5K1 396 aa17.8■□□□□ 0.44
GNE-201ENST00000377902 G3V2T6 193 aa17.79■□□□□ 0.44
GNE-201ENST00000377902 TSPAN3O60637 253 aa17.79■□□□□ 0.44
GNE-201ENST00000377902 NIPSNAP2O75323 286 aa17.79■□□□□ 0.44
GNE-201ENST00000377902 VPS4BO75351 444 aa17.79■□□□□ 0.44
GNE-201ENST00000377902 UROSP10746 265 aa17.79■□□□□ 0.44
GNE-201ENST00000377902 GGT5P36269 586 aa17.79■□□□□ 0.44
GNE-201ENST00000377902 RAD23AP54725 363 aa17.79■□□□□ 0.44
GNE-201ENST00000377902 TPD52P55327 224 aaPredicted RBP17.79■□□□□ 0.44
GNE-201ENST00000377902 ERVPABLB-1P60509 514 aa17.79■□□□□ 0.44
GNE-201ENST00000377902 CBX2Q14781 532 aaPredicted RBP17.79■□□□□ 0.44
GNE-201ENST00000377902 FBXL22Q6P050 247 aa17.79■□□□□ 0.44
GNE-201ENST00000377902 CRTC3Q6UUV7 619 aa17.79■□□□□ 0.44
GNE-201ENST00000377902 SLC16A12Q6ZSM3 486 aa17.79■□□□□ 0.44
GNE-201ENST00000377902 ZFAND4Q86XD8 727 aa17.79■□□□□ 0.44
GNE-201ENST00000377902 SPATA2LQ8IUW3 424 aaPredicted RBP17.79■□□□□ 0.44
GNE-201ENST00000377902 LRRC49Q8IUZ0 686 aa17.79■□□□□ 0.44
GNE-201ENST00000377902 C8orf59Q8N0T1 100 aaPredicted RBP17.79■□□□□ 0.44
GNE-201ENST00000377902 TEX26Q8N6G2 289 aa17.79■□□□□ 0.44
GNE-201ENST00000377902 CHDHQ8NE62 594 aaPredicted RBP17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms