RNA–Protein interactions for RNA: ENST00000377327.8

CRNKL1-201, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-201ENST00000377327 AGBL3Q8NEM8 1001 aa8.98□□□□□ -0.97
CRNKL1-201ENST00000377327 ASZ1Q8WWH4 475 aa8.98□□□□□ -0.97
CRNKL1-201ENST00000377327 NDRG1Q92597 394 aaKnown RBP8.98□□□□□ -0.97
CRNKL1-201ENST00000377327 C1GALT1C1Q96EU7 318 aa8.98□□□□□ -0.97
CRNKL1-201ENST00000377327 NARS2Q96I59 477 aaKnown RBP8.98□□□□□ -0.97
CRNKL1-201ENST00000377327 B3GALT6Q96L58 329 aa8.98□□□□□ -0.97
CRNKL1-201ENST00000377327 TWNKQ96RR1 684 aa8.98□□□□□ -0.97
CRNKL1-201ENST00000377327 COLEC11Q9BWP8 271 aa8.98□□□□□ -0.97
CRNKL1-201ENST00000377327 FTHL17Q9BXU8 183 aa8.98□□□□□ -0.97
CRNKL1-201ENST00000377327 PAK1IP1Q9NWT1 392 aaPredicted RBP8.98□□□□□ -0.97
CRNKL1-201ENST00000377327 ZNHIT2Q9UHR6 403 aa8.98□□□□□ -0.97
CRNKL1-201ENST00000377327 PCDHGA7Q9Y5G6 932 aa8.98□□□□□ -0.97
CRNKL1-201ENST00000377327 FABP12A6NFH5 140 aa8.98□□□□□ -0.97
CRNKL1-201ENST00000377327 TCAF2A6NFQ2 919 aa8.98□□□□□ -0.97
CRNKL1-201ENST00000377327 F5H5T6 163 aa8.98□□□□□ -0.97
CRNKL1-201ENST00000377327 AQP9O43315 295 aa8.98□□□□□ -0.97
CRNKL1-201ENST00000377327 XPNPEP2O43895 674 aa8.98□□□□□ -0.97
CRNKL1-201ENST00000377327 RECQL4O94761 1208 aa8.98□□□□□ -0.97
CRNKL1-201ENST00000377327 AP2A2O94973 939 aa8.98□□□□□ -0.97
CRNKL1-201ENST00000377327 GNAO1P09471 354 aa8.98□□□□□ -0.97
CRNKL1-201ENST00000377327 PIRTP0C851 137 aa8.98□□□□□ -0.97
CRNKL1-201ENST00000377327 OR1E1P30953 314 aa8.98□□□□□ -0.97
CRNKL1-201ENST00000377327 PLA2G16P53816 162 aa8.98□□□□□ -0.97
CRNKL1-201ENST00000377327 DNAJB13P59910 316 aa8.98□□□□□ -0.97
CRNKL1-201ENST00000377327 SPIBQ01892 262 aa8.98□□□□□ -0.97
CRNKL1-201ENST00000377327 SPOUT1Q5T280 376 aaKnown RBP8.98□□□□□ -0.97
CRNKL1-201ENST00000377327 PRAMEF18Q5VWM3 479 aa8.98□□□□□ -0.97
CRNKL1-201ENST00000377327 STEAP4Q687X5 459 aa8.98□□□□□ -0.97
CRNKL1-201ENST00000377327 SULT1C3Q6IMI6 304 aa8.98□□□□□ -0.97
CRNKL1-201ENST00000377327 DCLRE1AQ6PJP8 1040 aa8.98□□□□□ -0.97
CRNKL1-201ENST00000377327 HACD2Q6Y1H2 254 aa8.98□□□□□ -0.97
CRNKL1-201ENST00000377327 IKBIPQ70UQ0 350 aa8.98□□□□□ -0.97
CRNKL1-201ENST00000377327 WDTC1Q8N5D0 677 aa8.98□□□□□ -0.97
CRNKL1-201ENST00000377327 MFSD2AQ8NA29 543 aa8.98□□□□□ -0.97
CRNKL1-201ENST00000377327 TXNDC5Q8NBS9 432 aaKnown RBP8.98□□□□□ -0.97
CRNKL1-201ENST00000377327 GFM1Q96RP9 751 aaKnown RBP8.98□□□□□ -0.97
CRNKL1-201ENST00000377327 P2RX7Q99572 595 aaKnown RBP8.98□□□□□ -0.97
CRNKL1-201ENST00000377327 OSMRQ99650 979 aa8.98□□□□□ -0.97
CRNKL1-201ENST00000377327 SMAD5Q99717 465 aaKnown RBP8.98□□□□□ -0.97
CRNKL1-201ENST00000377327 MLPHQ9BV36 600 aaPredicted RBP8.98□□□□□ -0.97
CRNKL1-201ENST00000377327 KATNAL1Q9BW62 490 aa8.98□□□□□ -0.97
CRNKL1-201ENST00000377327 ZNF717Q9BY31 904 aaPredicted RBP8.98□□□□□ -0.97
CRNKL1-201ENST00000377327 TLR8Q9NR97 1041 aaKnown RBP8.98□□□□□ -0.97
CRNKL1-201ENST00000377327 OLAHQ9NV23 265 aa8.98□□□□□ -0.97
CRNKL1-201ENST00000377327 UXTQ9UBK9 157 aaPredicted RBP8.98□□□□□ -0.97
CRNKL1-201ENST00000377327 HMGXB4Q9UGU5 601 aa8.98□□□□□ -0.97
CRNKL1-201ENST00000377327 SFMBT1Q9UHJ3 866 aa8.98□□□□□ -0.97
CRNKL1-201ENST00000377327 ATP6V1HQ9UI12 483 aa8.98□□□□□ -0.97
CRNKL1-201ENST00000377327 DYNC1LI2O43237 492 aaPredicted RBP8.97□□□□□ -0.97
CRNKL1-201ENST00000377327 ORC5O43913 435 aa8.97□□□□□ -0.97
CRNKL1-201ENST00000377327 SNX4O95219 450 aa8.97□□□□□ -0.97
CRNKL1-201ENST00000377327 SIX3O95343 332 aaPredicted RBP8.97□□□□□ -0.97
CRNKL1-201ENST00000377327 CRATP43155 626 aa8.97□□□□□ -0.97
CRNKL1-201ENST00000377327 TTPAP49638 278 aa8.97□□□□□ -0.97
CRNKL1-201ENST00000377327 ZNF132P52740 706 aa8.97□□□□□ -0.97
CRNKL1-201ENST00000377327 INHBEP58166 350 aa8.97□□□□□ -0.97
CRNKL1-201ENST00000377327 NIPAL4Q0D2K0 466 aa8.97□□□□□ -0.97
CRNKL1-201ENST00000377327 PRR23BQ6ZRT6 265 aa8.97□□□□□ -0.97
CRNKL1-201ENST00000377327 SLC13A3Q8WWT9 602 aa8.97□□□□□ -0.97
CRNKL1-201ENST00000377327 NELL1Q92832 810 aa8.97□□□□□ -0.97
CRNKL1-201ENST00000377327 SH3KBP1Q96B97 665 aa8.97□□□□□ -0.97
CRNKL1-201ENST00000377327 LINGO1Q96FE5 620 aa8.97□□□□□ -0.97
CRNKL1-201ENST00000377327 SERPINB11Q96P15 392 aa8.97□□□□□ -0.97
CRNKL1-201ENST00000377327 TMEM209Q96SK2 561 aa8.97□□□□□ -0.97
CRNKL1-201ENST00000377327 HBEGFQ99075 208 aa8.97□□□□□ -0.97
CRNKL1-201ENST00000377327 SEMA3CQ99985 751 aa8.97□□□□□ -0.97
CRNKL1-201ENST00000377327 CNPPD1Q9BV87 410 aa8.97□□□□□ -0.97
CRNKL1-201ENST00000377327 NIFKQ9BYG3 293 aaKnown RBP8.97□□□□□ -0.97
CRNKL1-201ENST00000377327 MIR1-1HGQ9H1L0 117 aa8.97□□□□□ -0.97
CRNKL1-201ENST00000377327 PTPRJQ12913 1337 aa8.97□□□□□ -0.97
CRNKL1-201ENST00000377327 MYH11P35749 1972 aa8.97□□□□□ -0.97
CRNKL1-201ENST00000377327 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.97□□□□□ -0.97
CRNKL1-201ENST00000377327 H3BRB1 525 aa8.97□□□□□ -0.97
CRNKL1-201ENST00000377327 NUAK1O60285 661 aa8.97□□□□□ -0.97
CRNKL1-201ENST00000377327 FUCA1P04066 466 aa8.97□□□□□ -0.97
CRNKL1-201ENST00000377327 PGRP06401 933 aa8.97□□□□□ -0.97
CRNKL1-201ENST00000377327 HOXC6P09630 235 aa8.97□□□□□ -0.97
CRNKL1-201ENST00000377327 ZNF26P17031 533 aaPredicted RBP8.97□□□□□ -0.97
CRNKL1-201ENST00000377327 DCKP27707 260 aa8.97□□□□□ -0.97
CRNKL1-201ENST00000377327 GTF2E2P29084 291 aaKnown RBP8.97□□□□□ -0.97
CRNKL1-201ENST00000377327 BLVRAP53004 296 aa8.97□□□□□ -0.97
CRNKL1-201ENST00000377327 MAPK12P53778 367 aa8.97□□□□□ -0.97
CRNKL1-201ENST00000377327 HUNKP57058 714 aa8.97□□□□□ -0.97
CRNKL1-201ENST00000377327 ZNF177Q13360 481 aaPredicted RBP8.97□□□□□ -0.97
CRNKL1-201ENST00000377327 CPSF6Q16630 551 aaKnown RBP eCLIP8.97□□□□□ -0.97
CRNKL1-201ENST00000377327 HIST2H2ACQ16777 129 aaPredicted RBP8.97□□□□□ -0.97
CRNKL1-201ENST00000377327 TBRG1Q3YBR2 411 aa8.97□□□□□ -0.97
CRNKL1-201ENST00000377327 HIST2H2AA3Q6FI13 130 aa8.97□□□□□ -0.97
CRNKL1-201ENST00000377327 C15orf39Q6ZRI6 1047 aa8.97□□□□□ -0.97
CRNKL1-201ENST00000377327 PIWIL3Q7Z3Z3 882 aaKnown RBP8.97□□□□□ -0.97
CRNKL1-201ENST00000377327 CLHC1Q8NHS4 586 aa8.97□□□□□ -0.97
CRNKL1-201ENST00000377327 TBATAQ96M53 351 aa8.97□□□□□ -0.97
CRNKL1-201ENST00000377327 MED28Q9H204 178 aa8.97□□□□□ -0.97
CRNKL1-201ENST00000377327 TUT1Q9H6E5 874 aaKnown RBP8.97□□□□□ -0.97
CRNKL1-201ENST00000377327 PAQR5Q9NXK6 330 aaPredicted RBP8.97□□□□□ -0.97
CRNKL1-201ENST00000377327 MRPL39Q9NYK5 338 aaKnown RBP8.97□□□□□ -0.97
CRNKL1-201ENST00000377327 ANKMY1Q9P2S6 941 aa8.97□□□□□ -0.97
CRNKL1-201ENST00000377327 SNX6Q9UNH7 406 aa8.97□□□□□ -0.97
CRNKL1-201ENST00000377327 PCDHB3Q9Y5E6 796 aa8.97□□□□□ -0.97
CRNKL1-201ENST00000377327 PCDHGA3Q9Y5H0 932 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms