RNA–Protein interactions for RNA: ENST00000376545.7

ABCF1-202, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ABCF1, Length 3,131 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-202ENST00000376545 UBA2Q9UBT2 640 aaPredicted RBP10.56□□□□□ -0.72
ABCF1-202ENST00000376545 NOD1Q9Y239 953 aa10.56□□□□□ -0.72
ABCF1-202ENST00000376545 A0A0J9YVX5 310 aa10.56□□□□□ -0.72
ABCF1-202ENST00000376545 IFRD1O00458 451 aaPredicted RBP10.56□□□□□ -0.72
ABCF1-202ENST00000376545 BTN3A1O00481 513 aa10.56□□□□□ -0.72
ABCF1-202ENST00000376545 EI24O14681 340 aa10.56□□□□□ -0.72
ABCF1-202ENST00000376545 VPS26AO75436 327 aa10.56□□□□□ -0.72
ABCF1-202ENST00000376545 CHEK2O96017 543 aa10.56□□□□□ -0.72
ABCF1-202ENST00000376545 LPOP22079 712 aaPredicted RBP10.56□□□□□ -0.72
ABCF1-202ENST00000376545 TTKP33981 857 aa10.56□□□□□ -0.72
ABCF1-202ENST00000376545 RPS9P46781 194 aaKnown RBP10.56□□□□□ -0.72
ABCF1-202ENST00000376545 ABRAXAS1Q6UWZ7 409 aa10.56□□□□□ -0.72
ABCF1-202ENST00000376545 RSPO2Q6UXX9 243 aaPredicted RBP10.56□□□□□ -0.72
ABCF1-202ENST00000376545 RNF165Q6ZSG1 346 aa10.56□□□□□ -0.72
ABCF1-202ENST00000376545 GPRIN3Q6ZVF9 776 aa10.56□□□□□ -0.72
ABCF1-202ENST00000376545 LYSMD3Q7Z3D4 306 aa10.56□□□□□ -0.72
ABCF1-202ENST00000376545 CFAP52Q8N1V2 620 aa10.56□□□□□ -0.72
ABCF1-202ENST00000376545 LEMD2Q8NC56 503 aa10.56□□□□□ -0.72
ABCF1-202ENST00000376545 OR7D4Q8NG98 312 aa10.56□□□□□ -0.72
ABCF1-202ENST00000376545 EEF1AKMT1Q8WVE0 214 aa10.56□□□□□ -0.72
ABCF1-202ENST00000376545 CCDC68Q9H2F9 335 aa10.56□□□□□ -0.72
ABCF1-202ENST00000376545 HIPK3Q9H422 1215 aa10.56□□□□□ -0.72
ABCF1-202ENST00000376545 PREBQ9HCU5 417 aa10.56□□□□□ -0.72
ABCF1-202ENST00000376545 INTS7Q9NVH2 962 aaKnown RBP10.56□□□□□ -0.72
ABCF1-202ENST00000376545 RIC8BQ9NVN3 520 aa10.56□□□□□ -0.72
ABCF1-202ENST00000376545 FADS3Q9Y5Q0 445 aa10.56□□□□□ -0.72
ABCF1-202ENST00000376545 CASP8AP2Q9UKL3 1982 aa10.55□□□□□ -0.72
ABCF1-202ENST00000376545 SCN8AQ9UQD0 1980 aa10.55□□□□□ -0.72
ABCF1-202ENST00000376545 TLR5O60602 858 aa10.55□□□□□ -0.72
ABCF1-202ENST00000376545 CLCN7P51798 805 aa10.55□□□□□ -0.72
ABCF1-202ENST00000376545 NUP107P57740 925 aa10.55□□□□□ -0.72
ABCF1-202ENST00000376545 ERVPABLB-1P60509 514 aa10.55□□□□□ -0.72
ABCF1-202ENST00000376545 SMARCB1Q12824 385 aa10.55□□□□□ -0.72
ABCF1-202ENST00000376545 KIAA0040Q15053 153 aa10.55□□□□□ -0.72
ABCF1-202ENST00000376545 PYCR3Q53H96 274 aa10.55□□□□□ -0.72
ABCF1-202ENST00000376545 FBXO48Q5FWF7 155 aa10.55□□□□□ -0.72
ABCF1-202ENST00000376545 ZNF786Q8N393 782 aa10.55□□□□□ -0.72
ABCF1-202ENST00000376545 TTC30BQ8N4P2 665 aa10.55□□□□□ -0.72
ABCF1-202ENST00000376545 SIDT2Q8NBJ9 832 aaKnown RBP10.55□□□□□ -0.72
ABCF1-202ENST00000376545 PDPRQ8NCN5 879 aa10.55□□□□□ -0.72
ABCF1-202ENST00000376545 FBXL20Q96IG2 436 aa10.55□□□□□ -0.72
ABCF1-202ENST00000376545 TMEM74Q96NL1 305 aa10.55□□□□□ -0.72
ABCF1-202ENST00000376545 CINPQ9BW66 212 aaPredicted RBP10.55□□□□□ -0.72
ABCF1-202ENST00000376545 LIN28AQ9H9Z2 209 aaKnown RBP10.55□□□□□ -0.72
ABCF1-202ENST00000376545 EBF1Q9UH73 591 aa10.55□□□□□ -0.72
ABCF1-202ENST00000376545 ZFP37Q9Y6Q3 630 aaPredicted RBP10.55□□□□□ -0.72
ABCF1-202ENST00000376545 CEP350Q5VT06 3117 aa10.55□□□□□ -0.72
ABCF1-202ENST00000376545 RNF103-CHMP3A0A140T963 221 aa10.55□□□□□ -0.72
ABCF1-202ENST00000376545 TPD52L2O43399 206 aaKnown RBP10.55□□□□□ -0.72
ABCF1-202ENST00000376545 OR1I1O60431 355 aa10.55□□□□□ -0.72
ABCF1-202ENST00000376545 NIPSNAP2O75323 286 aa10.55□□□□□ -0.72
ABCF1-202ENST00000376545 CKBP12277 381 aa10.55□□□□□ -0.72
ABCF1-202ENST00000376545 CDH1P12830 882 aa10.55□□□□□ -0.72
ABCF1-202ENST00000376545 NCK1P16333 377 aa10.55□□□□□ -0.72
ABCF1-202ENST00000376545 IL2P60568 153 aa10.55□□□□□ -0.72
ABCF1-202ENST00000376545 GRSF1Q12849 480 aaKnown RBP eCLIP10.55□□□□□ -0.72
ABCF1-202ENST00000376545 TGFBIQ15582 683 aa10.55□□□□□ -0.72
ABCF1-202ENST00000376545 IL31Q6EBC2 164 aa10.55□□□□□ -0.72
ABCF1-202ENST00000376545 TBPL2Q6SJ96 375 aa10.55□□□□□ -0.72
ABCF1-202ENST00000376545 RNF19BQ6ZMZ0 732 aa10.55□□□□□ -0.72
ABCF1-202ENST00000376545 GPSM1Q86YR5 675 aa10.55□□□□□ -0.72
ABCF1-202ENST00000376545 SFRP1Q8N474 314 aa10.55□□□□□ -0.72
ABCF1-202ENST00000376545 DHRSXQ8N5I4 330 aa10.55□□□□□ -0.72
ABCF1-202ENST00000376545 C12orf43Q96C57 262 aaKnown RBP10.55□□□□□ -0.72
ABCF1-202ENST00000376545 ACOX2Q99424 681 aa10.55□□□□□ -0.72
ABCF1-202ENST00000376545 TUBA1CQ9BQE3 449 aa10.55□□□□□ -0.72
ABCF1-202ENST00000376545 GPR62Q9BZJ7 368 aa10.55□□□□□ -0.72
ABCF1-202ENST00000376545 NUDT4Q9NZJ9 180 aa10.55□□□□□ -0.72
ABCF1-202ENST00000376545 USP22Q9UPT9 525 aa10.55□□□□□ -0.72
ABCF1-202ENST00000376545 CCL27Q9Y4X3 112 aa10.55□□□□□ -0.72
ABCF1-202ENST00000376545 ILVBLA1L0T0 632 aa10.54□□□□□ -0.72
ABCF1-202ENST00000376545 ANKRD66B4E2M5 251 aa10.54□□□□□ -0.72
ABCF1-202ENST00000376545 CLOCKO15516 846 aa10.54□□□□□ -0.72
ABCF1-202ENST00000376545 CRCPO75575 148 aa10.54□□□□□ -0.72
ABCF1-202ENST00000376545 BAIAP3O94812 1187 aa10.54□□□□□ -0.72
ABCF1-202ENST00000376545 OR4F21O95013 312 aa10.54□□□□□ -0.72
ABCF1-202ENST00000376545 CD160O95971 181 aa10.54□□□□□ -0.72
ABCF1-202ENST00000376545 COL6A1P12109 1028 aa10.54□□□□□ -0.72
ABCF1-202ENST00000376545 TPP2P29144 1249 aaPredicted RBP10.54□□□□□ -0.72
ABCF1-202ENST00000376545 OR4D2P58180 307 aa10.54□□□□□ -0.72
ABCF1-202ENST00000376545 ESRRGP62508 458 aa10.54□□□□□ -0.72
ABCF1-202ENST00000376545 TRIM32Q13049 653 aa10.54□□□□□ -0.72
ABCF1-202ENST00000376545 PRKG2Q13237 762 aa10.54□□□□□ -0.72
ABCF1-202ENST00000376545 PMS2P3Q13401 168 aa10.54□□□□□ -0.72
ABCF1-202ENST00000376545 LETMD1Q6P1Q0 360 aa10.54□□□□□ -0.72
ABCF1-202ENST00000376545 GALNT13Q8IUC8 556 aa10.54□□□□□ -0.72
ABCF1-202ENST00000376545 PNPT1Q8TCS8 783 aaKnown RBP10.54□□□□□ -0.72
ABCF1-202ENST00000376545 C2orf15Q8WU43 125 aaKnown RBP10.54□□□□□ -0.72
ABCF1-202ENST00000376545 OSCP1Q8WVF1 389 aa10.54□□□□□ -0.72
ABCF1-202ENST00000376545 CCDC115Q96NT0 180 aa10.54□□□□□ -0.72
ABCF1-202ENST00000376545 CDK5RAP1Q96SZ6 601 aaKnown RBP10.54□□□□□ -0.72
ABCF1-202ENST00000376545 CWH43Q9H720 699 aa10.54□□□□□ -0.72
ABCF1-202ENST00000376545 MARCH5Q9NX47 278 aa10.54□□□□□ -0.72
ABCF1-202ENST00000376545 MAGEL2Q9UJ55 1249 aa10.54□□□□□ -0.72
ABCF1-202ENST00000376545 TRMT6Q9UJA5 497 aaKnown RBP10.54□□□□□ -0.72
ABCF1-202ENST00000376545 GABRQQ9UN88 632 aa10.54□□□□□ -0.72
ABCF1-202ENST00000376545 SLC27A5Q9Y2P5 690 aa10.54□□□□□ -0.72
ABCF1-202ENST00000376545 PRG3Q9Y2Y8 225 aaPredicted RBP10.54□□□□□ -0.72
ABCF1-202ENST00000376545 LSM1O15116 133 aaKnown RBP10.54□□□□□ -0.72
ABCF1-202ENST00000376545 TPST1O60507 370 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms