RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 ARHGAP36Q6ZRI8 547 aa12.8□□□□□ -0.36
MSH5-204ENST00000375755 THAP5Q7Z6K1 395 aa12.8□□□□□ -0.36
MSH5-204ENST00000375755 TMCO2Q7Z6W1 182 aaPredicted RBP12.8□□□□□ -0.36
MSH5-204ENST00000375755 FAM126BQ8IXS8 530 aa12.8□□□□□ -0.36
MSH5-204ENST00000375755 THEM5Q8N1Q8 247 aa12.8□□□□□ -0.36
MSH5-204ENST00000375755 SCML4Q8N228 414 aa12.8□□□□□ -0.36
MSH5-204ENST00000375755 CLIP4Q8N3C7 705 aa12.8□□□□□ -0.36
MSH5-204ENST00000375755 RNF34Q969K3 372 aa12.8□□□□□ -0.36
MSH5-204ENST00000375755 TMEM125Q96AQ2 219 aa12.8□□□□□ -0.36
MSH5-204ENST00000375755 HDAC11Q96DB2 347 aa12.8□□□□□ -0.36
MSH5-204ENST00000375755 KIFC1Q9BW19 673 aa12.8□□□□□ -0.36
MSH5-204ENST00000375755 ALOXE3Q9BYJ1 711 aa12.8□□□□□ -0.36
MSH5-204ENST00000375755 HOXD1Q9GZZ0 328 aa12.8□□□□□ -0.36
MSH5-204ENST00000375755 CRISPLD1Q9H336 500 aa12.8□□□□□ -0.36
MSH5-204ENST00000375755 NTN4Q9HB63 628 aa12.8□□□□□ -0.36
MSH5-204ENST00000375755 OR12D3Q9UGF7 316 aa12.8□□□□□ -0.36
MSH5-204ENST00000375755 BAG5Q9UL15 447 aa12.8□□□□□ -0.36
MSH5-204ENST00000375755 RANBP2P49792 3224 aaKnown RBP12.8□□□□□ -0.36
MSH5-204ENST00000375755 EOMESO95936 686 aa12.8□□□□□ -0.36
MSH5-204ENST00000375755 SELPP16109 830 aa12.8□□□□□ -0.36
MSH5-204ENST00000375755 BMPR1AP36894 532 aa12.8□□□□□ -0.36
MSH5-204ENST00000375755 SEMA3BQ13214 749 aa12.8□□□□□ -0.36
MSH5-204ENST00000375755 RBM48Q5RL73 367 aaKnown RBP12.8□□□□□ -0.36
MSH5-204ENST00000375755 FAM171A1Q5VUB5 890 aa12.8□□□□□ -0.36
MSH5-204ENST00000375755 MMAAQ8IVH4 418 aaKnown RBP12.8□□□□□ -0.36
MSH5-204ENST00000375755 ATP6V0D2Q8N8Y2 350 aa12.8□□□□□ -0.36
MSH5-204ENST00000375755 DNAJB14Q8TBM8 379 aa12.8□□□□□ -0.36
MSH5-204ENST00000375755 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.8□□□□□ -0.36
MSH5-204ENST00000375755 C19orf60Q96EN9 201 aa12.8□□□□□ -0.36
MSH5-204ENST00000375755 CHID1Q9BWS9 393 aa12.8□□□□□ -0.36
MSH5-204ENST00000375755 GSTO2Q9H4Y5 243 aa12.8□□□□□ -0.36
MSH5-204ENST00000375755 THG1LQ9NWX6 298 aaKnown RBP12.8□□□□□ -0.36
MSH5-204ENST00000375755 PMF1-BGLAPU3KQ54 211 aa12.8□□□□□ -0.36
MSH5-204ENST00000375755 A0A1W2PQH9 124 aa12.8□□□□□ -0.36
MSH5-204ENST00000375755 LRIG2O94898 1065 aa12.8□□□□□ -0.36
MSH5-204ENST00000375755 RPLP2P05387 115 aaKnown RBP12.8□□□□□ -0.36
MSH5-204ENST00000375755 ALDH4A1P30038 563 aa12.8□□□□□ -0.36
MSH5-204ENST00000375755 ARSFP54793 590 aa12.8□□□□□ -0.36
MSH5-204ENST00000375755 TPI1P60174 286 aa12.8□□□□□ -0.36
MSH5-204ENST00000375755 MEP1AQ16819 746 aa12.8□□□□□ -0.36
MSH5-204ENST00000375755 VARS2Q5ST30 1063 aaKnown RBP12.8□□□□□ -0.36
MSH5-204ENST00000375755 UGT3A1Q6NUS8 523 aa12.8□□□□□ -0.36
MSH5-204ENST00000375755 LEMD2Q8NC56 503 aa12.8□□□□□ -0.36
MSH5-204ENST00000375755 NDNFQ8TB73 568 aa12.8□□□□□ -0.36
MSH5-204ENST00000375755 TSEN34Q9BSV6 310 aaKnown RBP12.8□□□□□ -0.36
MSH5-204ENST00000375755 NDFIP2Q9NV92 336 aa12.8□□□□□ -0.36
MSH5-204ENST00000375755 ZNF229Q9UJW7 825 aa12.8□□□□□ -0.36
MSH5-204ENST00000375755 PCDHB8Q9UN66 801 aa12.8□□□□□ -0.36
MSH5-204ENST00000375755 PCDHGA8Q9Y5G5 932 aa12.8□□□□□ -0.36
MSH5-204ENST00000375755 PATJQ8NI35 1801 aa12.8□□□□□ -0.36
MSH5-204ENST00000375755 CHD7Q9P2D1 2997 aa12.79□□□□□ -0.36
MSH5-204ENST00000375755 EIF3FO00303 357 aaPredicted RBP12.79□□□□□ -0.36
MSH5-204ENST00000375755 MAN1A2O60476 641 aa12.79□□□□□ -0.36
MSH5-204ENST00000375755 TBX18O95935 607 aa12.79□□□□□ -0.36
MSH5-204ENST00000375755 MOCS2O96007 188 aaPredicted RBP12.79□□□□□ -0.36
MSH5-204ENST00000375755 ARNTP27540 789 aa12.79□□□□□ -0.36
MSH5-204ENST00000375755 ECT2LQ008S8 904 aa12.79□□□□□ -0.36
MSH5-204ENST00000375755 GRB7Q14451 532 aa12.79□□□□□ -0.36
MSH5-204ENST00000375755 UGP2Q16851 508 aa12.79□□□□□ -0.36
MSH5-204ENST00000375755 DEFB128Q7Z7B8 93 aa12.79□□□□□ -0.36
MSH5-204ENST00000375755 SLAIN1Q8ND83 568 aa12.79□□□□□ -0.36
MSH5-204ENST00000375755 BCL7CQ8WUZ0 217 aaPredicted RBP12.79□□□□□ -0.36
MSH5-204ENST00000375755 BIRC7Q96CA5 298 aa12.79□□□□□ -0.36
MSH5-204ENST00000375755 UROC1Q96N76 676 aa12.79□□□□□ -0.36
MSH5-204ENST00000375755 CASD1Q96PB1 797 aa12.79□□□□□ -0.36
MSH5-204ENST00000375755 FAM193BQ96PV7 902 aaPredicted RBP12.79□□□□□ -0.36
MSH5-204ENST00000375755 TP63Q9H3D4 680 aaPredicted RBP12.79□□□□□ -0.36
MSH5-204ENST00000375755 ALG2Q9H553 416 aa12.79□□□□□ -0.36
MSH5-204ENST00000375755 MAGEE1Q9HCI5 957 aa12.79□□□□□ -0.36
MSH5-204ENST00000375755 HPS4Q9NQG7 708 aa12.79□□□□□ -0.36
MSH5-204ENST00000375755 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.79□□□□□ -0.363e-9■■□□□ 13
MSH5-204ENST00000375755 A0A1W2PQ67 120 aa12.79□□□□□ -0.36
MSH5-204ENST00000375755 ERI2A8K979 691 aaKnown RBP12.79□□□□□ -0.36
MSH5-204ENST00000375755 UPK1AO00322 258 aa12.79□□□□□ -0.36
MSH5-204ENST00000375755 NADKO95544 446 aaPredicted RBP12.79□□□□□ -0.36
MSH5-204ENST00000375755 THRBP10828 461 aa12.79□□□□□ -0.36
MSH5-204ENST00000375755 SLC1A2P43004 574 aa12.79□□□□□ -0.36
MSH5-204ENST00000375755 CXCR3P49682 368 aa12.79□□□□□ -0.36
MSH5-204ENST00000375755 LIPEQ05469 1076 aa12.79□□□□□ -0.36
MSH5-204ENST00000375755 SLC13A2Q13183 592 aa12.79□□□□□ -0.36
MSH5-204ENST00000375755 RBM20Q5T481 1227 aaKnown RBP12.79□□□□□ -0.36
MSH5-204ENST00000375755 TMEM236Q5W0B7 351 aa12.79□□□□□ -0.36
MSH5-204ENST00000375755 ESRP1Q6NXG1 681 aaKnown RBP12.79□□□□□ -0.36
MSH5-204ENST00000375755 SIX5Q8N196 739 aa12.79□□□□□ -0.36
MSH5-204ENST00000375755 CHDHQ8NE62 594 aaPredicted RBP12.79□□□□□ -0.36
MSH5-204ENST00000375755 OSCP1Q8WVF1 389 aa12.79□□□□□ -0.36
MSH5-204ENST00000375755 HDAC2Q92769 488 aaKnown RBP12.79□□□□□ -0.36
MSH5-204ENST00000375755 RNF145Q96MT1 663 aa12.79□□□□□ -0.36
MSH5-204ENST00000375755 KCTD14Q9BQ13 255 aaPredicted RBP12.79□□□□□ -0.36
MSH5-204ENST00000375755 MARCH5Q9NX47 278 aa12.79□□□□□ -0.36
MSH5-204ENST00000375755 DSEQ9UL01 958 aa12.79□□□□□ -0.36
MSH5-204ENST00000375755 A0A087X1B8 175 aa12.78□□□□□ -0.36
MSH5-204ENST00000375755 INPPL1O15357 1258 aa12.78□□□□□ -0.36
MSH5-204ENST00000375755 S100BP04271 92 aaPredicted RBP12.78□□□□□ -0.36
MSH5-204ENST00000375755 AGXTP21549 392 aa12.78□□□□□ -0.36
MSH5-204ENST00000375755 ALDH3A2P51648 485 aa12.78□□□□□ -0.36
MSH5-204ENST00000375755 LSM3P62310 102 aaKnown RBP12.78□□□□□ -0.36
MSH5-204ENST00000375755 CDH17Q12864 832 aa12.78□□□□□ -0.36
MSH5-204ENST00000375755 DAG1Q14118 895 aa12.78□□□□□ -0.36
MSH5-204ENST00000375755 CTU2Q2VPK5 515 aaKnown RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms