RNA–Protein interactions for RNA: ENST00000374606.9

PFDN6-201, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN6, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-201ENST00000374606 C10orf142B7Z368 130 aa17.31■□□□□ 0.36
PFDN6-201ENST00000374606 TRIM49D1C9J1S8 452 aa17.31■□□□□ 0.36
PFDN6-201ENST00000374606 PRMT5O14744 637 aaPredicted RBP17.31■□□□□ 0.36
PFDN6-201ENST00000374606 RAD51BO15315 384 aa17.31■□□□□ 0.36
PFDN6-201ENST00000374606 SLC25A14O95258 325 aaPredicted RBP17.31■□□□□ 0.36
PFDN6-201ENST00000374606 IGHV4-34P06331 123 aa17.31■□□□□ 0.36
PFDN6-201ENST00000374606 RALBP11234 206 aa17.31■□□□□ 0.36
PFDN6-201ENST00000374606 KRT15P19012 456 aa17.31■□□□□ 0.36
PFDN6-201ENST00000374606 AKT2P31751 481 aa17.31■□□□□ 0.36
PFDN6-201ENST00000374606 IGFALSP35858 605 aa17.31■□□□□ 0.36
PFDN6-201ENST00000374606 NUDT1P36639 197 aa17.31■□□□□ 0.36
PFDN6-201ENST00000374606 MROH9Q5TGP6 573 aa17.31■□□□□ 0.36
PFDN6-201ENST00000374606 HEATR4Q86WZ0 1026 aa17.31■□□□□ 0.36
PFDN6-201ENST00000374606 HEXDCQ8WVB3 486 aa17.31■□□□□ 0.36
PFDN6-201ENST00000374606 SNX19Q92543 992 aa17.31■□□□□ 0.36
PFDN6-201ENST00000374606 CENPTQ96BT3 561 aa17.31■□□□□ 0.36
PFDN6-201ENST00000374606 LENG8Q96PV6 779 aaPredicted RBP17.31■□□□□ 0.36
PFDN6-201ENST00000374606 NDNQ99608 321 aa17.31■□□□□ 0.36
PFDN6-201ENST00000374606 KLF6Q99612 283 aaPredicted RBP17.31■□□□□ 0.36
PFDN6-201ENST00000374606 GPR22Q99680 433 aa17.31■□□□□ 0.36
PFDN6-201ENST00000374606 SH3GL2Q99962 352 aa17.31■□□□□ 0.36
PFDN6-201ENST00000374606 BOCQ9BWV1 1114 aa17.31■□□□□ 0.36
PFDN6-201ENST00000374606 ZCCHC2Q9C0B9 1178 aaKnown RBP17.31■□□□□ 0.36
PFDN6-201ENST00000374606 CLPBQ9H078 707 aa17.31■□□□□ 0.36
PFDN6-201ENST00000374606 WDR26Q9H7D7 661 aa17.31■□□□□ 0.36
PFDN6-201ENST00000374606 TMBIM4Q9HC24 238 aa17.31■□□□□ 0.36
PFDN6-201ENST00000374606 MBNL1Q9NR56 388 aaKnown RBP17.31■□□□□ 0.36
PFDN6-201ENST00000374606 TMPRSS11EQ9UL52 423 aa17.31■□□□□ 0.36
PFDN6-201ENST00000374606 DMTF1Q9Y222 760 aa17.31■□□□□ 0.36
PFDN6-201ENST00000374606 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.31■□□□□ 0.36
PFDN6-201ENST00000374606 PCDHB1Q9Y5F3 818 aa17.31■□□□□ 0.36
PFDN6-201ENST00000374606 CACNA1EQ15878 2313 aa17.31■□□□□ 0.36
PFDN6-201ENST00000374606 PCNX2A6NKB5 2137 aa17.3■□□□□ 0.36
PFDN6-201ENST00000374606 IGLV3-16A0A075B6K0 115 aa17.3■□□□□ 0.36
PFDN6-201ENST00000374606 FPGTO14772 594 aa17.3■□□□□ 0.36
PFDN6-201ENST00000374606 HYAL3O43820 417 aaPredicted RBP17.3■□□□□ 0.36
PFDN6-201ENST00000374606 OR1I1O60431 355 aa17.3■□□□□ 0.36
PFDN6-201ENST00000374606 ESR1P03372 595 aa17.3■□□□□ 0.36
PFDN6-201ENST00000374606 MSH3P20585 1137 aa17.3■□□□□ 0.36
PFDN6-201ENST00000374606 RPS3P23396 243 aaKnown RBP eCLIP17.3■□□□□ 0.366e-7■■■□□ 19.1
PFDN6-201ENST00000374606 NSG1P42857 185 aa17.3■□□□□ 0.36
PFDN6-201ENST00000374606 SERPINB8P50452 374 aa17.3■□□□□ 0.36
PFDN6-201ENST00000374606 ADARP55265 1226 aaKnown RBP17.3■□□□□ 0.36
PFDN6-201ENST00000374606 RPL6Q02878 288 aaKnown RBP17.3■□□□□ 0.36
PFDN6-201ENST00000374606 HSP90B2PQ58FF3 399 aa17.3■□□□□ 0.36
PFDN6-201ENST00000374606 TRIM61Q5EBN2 209 aa17.3■□□□□ 0.36
PFDN6-201ENST00000374606 RBM20Q5T481 1227 aaKnown RBP17.3■□□□□ 0.36
PFDN6-201ENST00000374606 FAM45BPQ6NSW5 357 aa17.3■□□□□ 0.36
PFDN6-201ENST00000374606 FAM45AQ8TCE6 357 aa17.3■□□□□ 0.36
PFDN6-201ENST00000374606 BIRC7Q96CA5 298 aa17.3■□□□□ 0.36
PFDN6-201ENST00000374606 HIC2Q96JB3 615 aa17.3■□□□□ 0.36
PFDN6-201ENST00000374606 ELMO2Q96JJ3 720 aa17.3■□□□□ 0.36
PFDN6-201ENST00000374606 NUSAP1Q9BXS6 441 aaKnown RBP17.3■□□□□ 0.36
PFDN6-201ENST00000374606 P2RY12Q9H244 342 aa17.3■□□□□ 0.36
PFDN6-201ENST00000374606 PHPT1Q9NRX4 125 aaPredicted RBP17.3■□□□□ 0.36
PFDN6-201ENST00000374606 MBD1Q9UIS9 605 aaPredicted RBP17.3■□□□□ 0.36
PFDN6-201ENST00000374606 GNPTGQ9UJJ9 305 aa17.3■□□□□ 0.36
PFDN6-201ENST00000374606 MTO1Q9Y2Z2 717 aaKnown RBP17.3■□□□□ 0.36
PFDN6-201ENST00000374606 MSRB2Q9Y3D2 182 aa17.3■□□□□ 0.36
PFDN6-201ENST00000374606 COMMD10Q9Y6G5 202 aa17.3■□□□□ 0.36
PFDN6-201ENST00000374606 DOCK9Q9BZ29 2069 aa17.29■□□□□ 0.36
PFDN6-201ENST00000374606 MEI4A8MW99 385 aa17.29■□□□□ 0.36
PFDN6-201ENST00000374606 MAP3K13O43283 966 aa17.29■□□□□ 0.36
PFDN6-201ENST00000374606 MTX2O75431 263 aa17.29■□□□□ 0.36
PFDN6-201ENST00000374606 PKMP14618 531 aaKnown RBP17.29■□□□□ 0.36
PFDN6-201ENST00000374606 FMO4P31512 558 aa17.29■□□□□ 0.36
PFDN6-201ENST00000374606 SLC12A2P55011 1212 aa17.29■□□□□ 0.36
PFDN6-201ENST00000374606 CDK3Q00526 305 aa17.29■□□□□ 0.36
PFDN6-201ENST00000374606 INPP5AQ14642 412 aa17.29■□□□□ 0.36
PFDN6-201ENST00000374606 TRIM74Q86UV6 250 aa17.29■□□□□ 0.36
PFDN6-201ENST00000374606 CYP4X1Q8N118 509 aa17.29■□□□□ 0.36
PFDN6-201ENST00000374606 PIAS4Q8N2W9 510 aaPredicted RBP17.29■□□□□ 0.36
PFDN6-201ENST00000374606 CADM4Q8NFZ8 388 aa17.29■□□□□ 0.36
PFDN6-201ENST00000374606 CCDC97Q96F63 343 aaPredicted RBP17.29■□□□□ 0.36
PFDN6-201ENST00000374606 TSPAN17Q96FV3 270 aa17.29■□□□□ 0.36
PFDN6-201ENST00000374606 AARSD1Q9BTE6 412 aaKnown RBP17.29■□□□□ 0.36
PFDN6-201ENST00000374606 MED4Q9NPJ6 270 aa17.29■□□□□ 0.36
PFDN6-201ENST00000374606 SLC39A10Q9ULF5 831 aa17.29■□□□□ 0.36
PFDN6-201ENST00000374606 CNOT6Q9ULM6 557 aaKnown RBP17.29■□□□□ 0.36
PFDN6-201ENST00000374606 HMX2A2RU54 273 aa17.28■□□□□ 0.36
PFDN6-201ENST00000374606 METTL12A8MUP2 240 aa17.28■□□□□ 0.36
PFDN6-201ENST00000374606 F8W8V4 182 aa17.28■□□□□ 0.36
PFDN6-201ENST00000374606 PRAMEF26H0Y7S4 382 aa17.28■□□□□ 0.36
PFDN6-201ENST00000374606 H3BMM5 538 aa17.28■□□□□ 0.36
PFDN6-201ENST00000374606 MYCLP1P12525 358 aaPredicted RBP17.28■□□□□ 0.36
PFDN6-201ENST00000374606 SAT1P21673 171 aa17.28■□□□□ 0.36
PFDN6-201ENST00000374606 PI4KAP42356 2102 aa17.28■□□□□ 0.36
PFDN6-201ENST00000374606 POLD2P49005 469 aa17.28■□□□□ 0.36
PFDN6-201ENST00000374606 B4GALNT1Q00973 533 aa17.28■□□□□ 0.36
PFDN6-201ENST00000374606 DNAJC3Q13217 504 aa17.28■□□□□ 0.36
PFDN6-201ENST00000374606 GTF2H3Q13889 308 aa17.28■□□□□ 0.36
PFDN6-201ENST00000374606 USP10Q14694 798 aaKnown RBP17.28■□□□□ 0.36
PFDN6-201ENST00000374606 KHDC1Q4VXA5 237 aaKnown RBP17.28■□□□□ 0.36
PFDN6-201ENST00000374606 CTSL3PQ5NE16 218 aa17.28■□□□□ 0.36
PFDN6-201ENST00000374606 HECTD2Q5U5R9 776 aa17.28■□□□□ 0.36
PFDN6-201ENST00000374606 AGBL2Q5U5Z8 902 aa17.28■□□□□ 0.36
PFDN6-201ENST00000374606 PTRHD1Q6GMV3 140 aaKnown RBP17.28■□□□□ 0.36
PFDN6-201ENST00000374606 ZNF549Q6P9A3 640 aa17.28■□□□□ 0.36
PFDN6-201ENST00000374606 LPCAT2Q7L5N7 544 aa17.28■□□□□ 0.36
PFDN6-201ENST00000374606 SLC41A1Q8IVJ1 513 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms