RNA–Protein interactions for RNA: ENST00000372577.2

NUP188-201, Transcript of nucleoporin 188, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP188, Length 5,689 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-201ENST00000372577 NACC2Q96BF6 587 aa10.38□□□□□ -0.75
NUP188-201ENST00000372577 GPR22Q99680 433 aa10.38□□□□□ -0.75
NUP188-201ENST00000372577 POLR3BQ9NW08 1133 aaPredicted RBP10.38□□□□□ -0.75
NUP188-201ENST00000372577 C1orf109Q9NX04 203 aa10.38□□□□□ -0.75
NUP188-201ENST00000372577 MCM8Q9UJA3 840 aa10.38□□□□□ -0.75
NUP188-201ENST00000372577 FBXL21Q9UKT6 434 aa10.38□□□□□ -0.75
NUP188-201ENST00000372577 FCF1Q9Y324 198 aaKnown RBP10.38□□□□□ -0.75
NUP188-201ENST00000372577 PCDHGA11Q9Y5H2 935 aa10.38□□□□□ -0.75
NUP188-201ENST00000372577 TCRBV7S3A2A0A539 114 aa10.38□□□□□ -0.75
NUP188-201ENST00000372577 UBXN8O00124 270 aa10.38□□□□□ -0.75
NUP188-201ENST00000372577 ITPKAP23677 461 aa10.38□□□□□ -0.75
NUP188-201ENST00000372577 SSR2P43308 183 aa10.38□□□□□ -0.75
NUP188-201ENST00000372577 HSPA7P48741 367 aa10.38□□□□□ -0.75
NUP188-201ENST00000372577 HNMTP50135 292 aa10.38□□□□□ -0.75
NUP188-201ENST00000372577 GSCP56915 257 aaPredicted RBP10.38□□□□□ -0.75
NUP188-201ENST00000372577 GPX6P59796 221 aa10.38□□□□□ -0.75
NUP188-201ENST00000372577 RPL26P61254 145 aaKnown RBP10.38□□□□□ -0.75
NUP188-201ENST00000372577 TAB1Q15750 504 aa10.38□□□□□ -0.75
NUP188-201ENST00000372577 CRTC3Q6UUV7 619 aa10.38□□□□□ -0.75
NUP188-201ENST00000372577 PRSS55Q6UWB4 352 aaPredicted RBP10.38□□□□□ -0.75
NUP188-201ENST00000372577 FGD2Q7Z6J4 655 aa10.38□□□□□ -0.75
NUP188-201ENST00000372577 TMPRSS11BQ86T26 416 aa10.38□□□□□ -0.75
NUP188-201ENST00000372577 TSSK3Q96PN8 268 aa10.38□□□□□ -0.75
NUP188-201ENST00000372577 ZNF317Q96PQ6 595 aaPredicted RBP10.38□□□□□ -0.75
NUP188-201ENST00000372577 FIZ1Q96SL8 496 aa10.38□□□□□ -0.75
NUP188-201ENST00000372577 NUAK2Q9H093 628 aa10.38□□□□□ -0.75
NUP188-201ENST00000372577 TRIT1Q9H3H1 467 aaKnown RBP10.38□□□□□ -0.75
NUP188-201ENST00000372577 C12orf65Q9H3J6 166 aaKnown RBP10.38□□□□□ -0.75
NUP188-201ENST00000372577 TMEM248Q9NWD8 314 aa10.38□□□□□ -0.75
NUP188-201ENST00000372577 SUCOQ9UBS9 1254 aaKnown RBP10.38□□□□□ -0.75
NUP188-201ENST00000372577 RUVBL1Q9Y265 456 aaKnown RBP10.38□□□□□ -0.75
NUP188-201ENST00000372577 YIPF1Q9Y548 306 aa10.38□□□□□ -0.75
NUP188-201ENST00000372577 FADS3Q9Y5Q0 445 aa10.38□□□□□ -0.75
NUP188-201ENST00000372577 FAM234BA2RU67 622 aa10.38□□□□□ -0.75
NUP188-201ENST00000372577 PPEF2O14830 753 aa10.38□□□□□ -0.75
NUP188-201ENST00000372577 OR10H2O60403 315 aa10.38□□□□□ -0.75
NUP188-201ENST00000372577 FYNP06241 537 aa10.38□□□□□ -0.75
NUP188-201ENST00000372577 SPATA31D3P0C874 917 aa10.38□□□□□ -0.75
NUP188-201ENST00000372577 CBSLP0DN79 551 aa10.38□□□□□ -0.75
NUP188-201ENST00000372577 CREB1P16220 341 aa10.38□□□□□ -0.75
NUP188-201ENST00000372577 CBSP35520 551 aa10.38□□□□□ -0.75
NUP188-201ENST00000372577 CDK9P50750 372 aaKnown RBP10.38□□□□□ -0.75
NUP188-201ENST00000372577 NR1D2Q14995 579 aa10.38□□□□□ -0.75
NUP188-201ENST00000372577 ZIK1Q3SY52 487 aaPredicted RBP10.38□□□□□ -0.75
NUP188-201ENST00000372577 CARD16Q5EG05 197 aa10.38□□□□□ -0.75
NUP188-201ENST00000372577 SPATA31D4Q6ZUB0 917 aa10.38□□□□□ -0.75
NUP188-201ENST00000372577 CIR1Q86X95 450 aaPredicted RBP10.38□□□□□ -0.75
NUP188-201ENST00000372577 GATAD2AQ86YP4 633 aa10.38□□□□□ -0.75
NUP188-201ENST00000372577 NAT16Q8N8M0 369 aa10.38□□□□□ -0.75
NUP188-201ENST00000372577 TTLL2Q9BWV7 592 aa10.38□□□□□ -0.75
NUP188-201ENST00000372577 HS3ST4Q9Y661 456 aa10.38□□□□□ -0.75
NUP188-201ENST00000372577 CCDC162PA2VCL2 907 aa10.38□□□□□ -0.75
NUP188-201ENST00000372577 C2orf71A6NGG8 1288 aa10.38□□□□□ -0.75
NUP188-201ENST00000372577 FPGTO14772 594 aa10.38□□□□□ -0.75
NUP188-201ENST00000372577 PIP5K1BO14986 540 aa10.38□□□□□ -0.75
NUP188-201ENST00000372577 KERAO60938 352 aa10.38□□□□□ -0.75
NUP188-201ENST00000372577 DGKGP49619 791 aa10.38□□□□□ -0.75
NUP188-201ENST00000372577 SERINC3Q13530 473 aa10.38□□□□□ -0.75
NUP188-201ENST00000372577 TEAD4Q15561 434 aa10.38□□□□□ -0.75
NUP188-201ENST00000372577 ALG11Q2TAA5 492 aa10.38□□□□□ -0.75
NUP188-201ENST00000372577 SPATS1Q496A3 300 aa10.38□□□□□ -0.75
NUP188-201ENST00000372577 VPS26BQ4G0F5 336 aa10.38□□□□□ -0.75
NUP188-201ENST00000372577 DGKKQ5KSL6 1271 aa10.38□□□□□ -0.75
NUP188-201ENST00000372577 GCNT6Q5T4J0 391 aa10.38□□□□□ -0.75
NUP188-201ENST00000372577 VWA5B1Q5TIE3 1220 aa10.38□□□□□ -0.75
NUP188-201ENST00000372577 CLEC6AQ6EIG7 209 aa10.38□□□□□ -0.75
NUP188-201ENST00000372577 LDB1Q86U70 411 aaPredicted RBP10.38□□□□□ -0.75
NUP188-201ENST00000372577 ARMC8Q8IUR7 673 aa10.38□□□□□ -0.75
NUP188-201ENST00000372577 SLC30A8Q8IWU4 369 aa10.38□□□□□ -0.75
NUP188-201ENST00000372577 TOP1MTQ969P6 601 aa10.38□□□□□ -0.75
NUP188-201ENST00000372577 TSGA13Q96PP4 275 aa10.38□□□□□ -0.75
NUP188-201ENST00000372577 DEPDC7Q96QD5 511 aa10.38□□□□□ -0.75
NUP188-201ENST00000372577 SMOQ99835 787 aa10.38□□□□□ -0.75
NUP188-201ENST00000372577 LPIN3Q9BQK8 851 aa10.38□□□□□ -0.75
NUP188-201ENST00000372577 C16orf70Q9BSU1 422 aa10.38□□□□□ -0.75
NUP188-201ENST00000372577 PLGRKTQ9HBL7 147 aa10.38□□□□□ -0.75
NUP188-201ENST00000372577 POPDC3Q9HBV1 291 aa10.38□□□□□ -0.75
NUP188-201ENST00000372577 ADAMTS5Q9UNA0 930 aa10.38□□□□□ -0.75
NUP188-201ENST00000372577 TIMM22Q9Y584 194 aa10.38□□□□□ -0.75
NUP188-201ENST00000372577 OR6A2O95222 327 aa10.37□□□□□ -0.75
NUP188-201ENST00000372577 LRATO95237 230 aa10.37□□□□□ -0.75
NUP188-201ENST00000372577 EPOP01588 193 aa10.37□□□□□ -0.75
NUP188-201ENST00000372577 CCNYL3P0C7X3 344 aa10.37□□□□□ -0.75
NUP188-201ENST00000372577 BMP7P18075 431 aa10.37□□□□□ -0.75
NUP188-201ENST00000372577 GSSP48637 474 aa10.37□□□□□ -0.75
NUP188-201ENST00000372577 ERVK-8P63133 956 aa10.37□□□□□ -0.75
NUP188-201ENST00000372577 NAE1Q13564 534 aa10.37□□□□□ -0.75
NUP188-201ENST00000372577 ATP13A5Q4VNC0 1218 aa10.37□□□□□ -0.75
NUP188-201ENST00000372577 CPNE9Q8IYJ1 553 aa10.37□□□□□ -0.75
NUP188-201ENST00000372577 NATD1Q8N6N6 113 aa10.37□□□□□ -0.75
NUP188-201ENST00000372577 PQLC3Q8N755 202 aa10.37□□□□□ -0.75
NUP188-201ENST00000372577 PEX13Q92968 403 aa10.37□□□□□ -0.75
NUP188-201ENST00000372577 C11orf84Q9BUA3 381 aaPredicted RBP10.37□□□□□ -0.75
NUP188-201ENST00000372577 KIFC1Q9BW19 673 aa10.37□□□□□ -0.75
NUP188-201ENST00000372577 RAB11FIP5Q9BXF6 653 aa10.37□□□□□ -0.75
NUP188-201ENST00000372577 NMUR1Q9HB89 426 aa10.37□□□□□ -0.75
NUP188-201ENST00000372577 USP29Q9HBJ7 922 aa10.37□□□□□ -0.75
NUP188-201ENST00000372577 RHBDL2Q9NX52 303 aa10.37□□□□□ -0.75
NUP188-201ENST00000372577 H0YGN5 161 aa10.37□□□□□ -0.75
NUP188-201ENST00000372577 K7EPI3 171 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms