RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 TNK2Q07912 1038 aa14.59□□□□□ -0.07
NDC1-201ENST00000371429 GTF2H2Q13888 395 aa14.59□□□□□ -0.07
NDC1-201ENST00000371429 LRRC32Q14392 662 aa14.59□□□□□ -0.07
NDC1-201ENST00000371429 INAQ16352 499 aa14.59□□□□□ -0.07
NDC1-201ENST00000371429 ITPRIPL2Q3MIP1 535 aa14.59□□□□□ -0.07
NDC1-201ENST00000371429 GTF2H2CQ6P1K8 395 aa14.59□□□□□ -0.07
NDC1-201ENST00000371429 SPOCK2Q92563 424 aa14.59□□□□□ -0.07
NDC1-201ENST00000371429 CENPIQ92674 756 aaPredicted RBP14.59□□□□□ -0.07
NDC1-201ENST00000371429 SMG9Q9H0W8 520 aaKnown RBP14.59□□□□□ -0.07
NDC1-201ENST00000371429 UGT1A7Q9HAW7 530 aa14.59□□□□□ -0.07
NDC1-201ENST00000371429 UGT1A10Q9HAW8 530 aa14.59□□□□□ -0.07
NDC1-201ENST00000371429 UGT1A8Q9HAW9 530 aa14.59□□□□□ -0.07
NDC1-201ENST00000371429 CRTAC1Q9NQ79 661 aa14.59□□□□□ -0.07
NDC1-201ENST00000371429 MATN4O95460 622 aa14.58□□□□□ -0.07
NDC1-201ENST00000371429 CFHP08603 1231 aa14.58□□□□□ -0.07
NDC1-201ENST00000371429 FGFR3P22607 806 aa14.58□□□□□ -0.07
NDC1-201ENST00000371429 IL1R2P27930 398 aa14.58□□□□□ -0.07
NDC1-201ENST00000371429 SERPINB1P30740 379 aa14.58□□□□□ -0.07
NDC1-201ENST00000371429 SRSF11Q05519 484 aaKnown RBP14.58□□□□□ -0.07
NDC1-201ENST00000371429 INCA1Q0VD86 236 aa14.58□□□□□ -0.07
NDC1-201ENST00000371429 RNF43Q68DV7 783 aa14.58□□□□□ -0.07
NDC1-201ENST00000371429 ALKBH2Q6NS38 261 aa14.58□□□□□ -0.07
NDC1-201ENST00000371429 OR13C4Q8NGS5 318 aa14.58□□□□□ -0.07
NDC1-201ENST00000371429 SLC9A6Q92581 669 aa14.58□□□□□ -0.07
NDC1-201ENST00000371429 PTPN18Q99952 460 aa14.58□□□□□ -0.07
NDC1-201ENST00000371429 ACSS2Q9NR19 701 aa14.58□□□□□ -0.07
NDC1-201ENST00000371429 ZNF180Q9UJW8 692 aa14.58□□□□□ -0.07
NDC1-201ENST00000371429 KIF13AQ9H1H9 1805 aa14.58□□□□□ -0.08
NDC1-201ENST00000371429 A0A0J9YYE9 177 aa14.58□□□□□ -0.08
NDC1-201ENST00000371429 CCDC162PA2VCL2 907 aa14.58□□□□□ -0.08
NDC1-201ENST00000371429 CPED1A4D0V7 1026 aa14.58□□□□□ -0.08
NDC1-201ENST00000371429 PRMT3O60678 531 aa14.58□□□□□ -0.08
NDC1-201ENST00000371429 ZNF623O75123 536 aa14.58□□□□□ -0.08
NDC1-201ENST00000371429 ATP6V1G2O95670 118 aa14.58□□□□□ -0.08
NDC1-201ENST00000371429 ALPIP09923 528 aa14.58□□□□□ -0.08
NDC1-201ENST00000371429 CCNFP41002 786 aa14.58□□□□□ -0.08
NDC1-201ENST00000371429 PLEKHG4Q58EX7 1191 aa14.58□□□□□ -0.08
NDC1-201ENST00000371429 TWIST2Q8WVJ9 160 aa14.58□□□□□ -0.08
NDC1-201ENST00000371429 FBXW2Q9UKT8 454 aa14.58□□□□□ -0.08
NDC1-201ENST00000371429 MFHAS1Q9Y4C4 1052 aa14.58□□□□□ -0.08
NDC1-201ENST00000371429 MCIDASD6RGH6 385 aa14.58□□□□□ -0.08
NDC1-201ENST00000371429 SIN3BO75182 1162 aa14.58□□□□□ -0.08
NDC1-201ENST00000371429 CCNHP51946 323 aaPredicted RBP14.58□□□□□ -0.08
NDC1-201ENST00000371429 TAS2R39P59534 338 aa14.58□□□□□ -0.08
NDC1-201ENST00000371429 ARHGAP36Q6ZRI8 547 aa14.58□□□□□ -0.08
NDC1-201ENST00000371429 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.58□□□□□ -0.08
NDC1-201ENST00000371429 SMYD1Q8NB12 490 aa14.58□□□□□ -0.08
NDC1-201ENST00000371429 SLC38A2Q96QD8 506 aa14.58□□□□□ -0.08
NDC1-201ENST00000371429 SIRPGQ9P1W8 387 aa14.58□□□□□ -0.08
NDC1-201ENST00000371429 SMIM31A0A1B0GVY4 71 aa14.58□□□□□ -0.08
NDC1-201ENST00000371429 EDF1O60869 148 aaKnown RBP14.58□□□□□ -0.08
NDC1-201ENST00000371429 METTL18O95568 372 aa14.58□□□□□ -0.08
NDC1-201ENST00000371429 OLFML1Q6UWY5 402 aa14.58□□□□□ -0.08
NDC1-201ENST00000371429 GTPBP2Q9BX10 602 aaKnown RBP14.58□□□□□ -0.08
NDC1-201ENST00000371429 RAB11FIP5Q9BXF6 653 aa14.58□□□□□ -0.08
NDC1-201ENST00000371429 STYXL1Q9Y6J8 313 aa14.58□□□□□ -0.08
NDC1-201ENST00000371429 VARSP26640 1264 aaKnown RBP14.57□□□□□ -0.08
NDC1-201ENST00000371429 ALDH4A1P30038 563 aa14.57□□□□□ -0.08
NDC1-201ENST00000371429 SLC7A2P52569 658 aa14.57□□□□□ -0.08
NDC1-201ENST00000371429 UPP1Q16831 310 aa14.57□□□□□ -0.08
NDC1-201ENST00000371429 MYLK3Q32MK0 819 aa14.57□□□□□ -0.08
NDC1-201ENST00000371429 ANO7Q6IWH7 933 aa14.57□□□□□ -0.08
NDC1-201ENST00000371429 ADGRD1Q6QNK2 874 aa14.57□□□□□ -0.08
NDC1-201ENST00000371429 FAM46DQ8NEK8 389 aa14.57□□□□□ -0.08
NDC1-201ENST00000371429 ELAC1Q9H777 363 aaKnown RBP14.57□□□□□ -0.08
NDC1-201ENST00000371429 SAMHD1Q9Y3Z3 626 aaKnown RBP14.57□□□□□ -0.08
NDC1-201ENST00000371429 MYADML2A6NDP7 307 aa14.57□□□□□ -0.08
NDC1-201ENST00000371429 J3KR12 359 aa14.57□□□□□ -0.08
NDC1-201ENST00000371429 NRP2O60462 931 aa14.57□□□□□ -0.08
NDC1-201ENST00000371429 CHRNA1P02708 482 aa14.57□□□□□ -0.08
NDC1-201ENST00000371429 TPP2P29144 1249 aaPredicted RBP14.57□□□□□ -0.08
NDC1-201ENST00000371429 PNLIPRP1P54315 467 aa14.57□□□□□ -0.08
NDC1-201ENST00000371429 ZNF155Q12901 538 aaPredicted RBP14.57□□□□□ -0.08
NDC1-201ENST00000371429 IL23RQ5VWK5 629 aa14.57□□□□□ -0.08
NDC1-201ENST00000371429 PRKAB1Q9Y478 270 aa14.57□□□□□ -0.08
NDC1-201ENST00000371429 PCDHGA11Q9Y5H2 935 aa14.57□□□□□ -0.08
NDC1-201ENST00000371429 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.57□□□□□ -0.08
NDC1-201ENST00000371429 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.57□□□□□ -0.08
NDC1-201ENST00000371429 GSTM5P46439 218 aa14.57□□□□□ -0.08
NDC1-201ENST00000371429 ARRB1P49407 418 aaPredicted RBP14.57□□□□□ -0.08
NDC1-201ENST00000371429 UGT2B15P54855 530 aa14.57□□□□□ -0.08
NDC1-201ENST00000371429 CSNK2BP67870 215 aa14.57□□□□□ -0.08
NDC1-201ENST00000371429 SPIBQ01892 262 aa14.57□□□□□ -0.08
NDC1-201ENST00000371429 INAVAQ3KP66 663 aa14.57□□□□□ -0.08
NDC1-201ENST00000371429 ARL13AQ5H913 290 aaPredicted RBP14.57□□□□□ -0.08
NDC1-201ENST00000371429 NCBP2-AS2Q69YL0 99 aa14.57□□□□□ -0.08
NDC1-201ENST00000371429 ALYREFQ86V81 257 aaKnown RBP14.57□□□□□ -0.08
NDC1-201ENST00000371429 SIX5Q8N196 739 aa14.57□□□□□ -0.08
NDC1-201ENST00000371429 OR2T12Q8NG77 320 aa14.57□□□□□ -0.08
NDC1-201ENST00000371429 AZIN2Q96A70 460 aa14.57□□□□□ -0.08
NDC1-201ENST00000371429 GPR62Q9BZJ7 368 aa14.57□□□□□ -0.08
NDC1-201ENST00000371429 DYTNA2CJ06 578 aa14.57□□□□□ -0.08
NDC1-201ENST00000371429 UNC5CO95185 931 aa14.57□□□□□ -0.08
NDC1-201ENST00000371429 RHOP08100 348 aa14.57□□□□□ -0.08
NDC1-201ENST00000371429 NRF1Q16656 503 aa14.57□□□□□ -0.08
NDC1-201ENST00000371429 TTC23Q5W5X9 447 aa14.57□□□□□ -0.08
NDC1-201ENST00000371429 ZYG11AQ6WRX3 759 aa14.57□□□□□ -0.08
NDC1-201ENST00000371429 ARMCX6Q7L4S7 300 aa14.57□□□□□ -0.08
NDC1-201ENST00000371429 CMTR2Q8IYT2 770 aaKnown RBP14.57□□□□□ -0.08
NDC1-201ENST00000371429 ZMAT2Q96NC0 199 aaKnown RBP14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms