RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 VITQ6UXI7 678 aa3.58□□□□□ -1.84
MCF2-202ENST00000370573 TBC1D1Q86TI0 1168 aaPredicted RBP3.58□□□□□ -1.84
MCF2-202ENST00000370573 LRRC49Q8IUZ0 686 aa3.58□□□□□ -1.84
MCF2-202ENST00000370573 APCDD1Q8J025 514 aa3.58□□□□□ -1.84
MCF2-202ENST00000370573 Q8N1Y9 231 aa3.58□□□□□ -1.84
MCF2-202ENST00000370573 PGBD5Q8N414 524 aa3.58□□□□□ -1.84
MCF2-202ENST00000370573 FAM26EQ8N5C1 309 aa3.58□□□□□ -1.84
MCF2-202ENST00000370573 ATPAF2Q8N5M1 289 aa3.58□□□□□ -1.84
MCF2-202ENST00000370573 OR2I1PQ8NGU4 316 aa3.58□□□□□ -1.84
MCF2-202ENST00000370573 FIBINQ8TAL6 211 aa3.58□□□□□ -1.84
MCF2-202ENST00000370573 FBXO25Q8TCJ0 367 aa3.58□□□□□ -1.84
MCF2-202ENST00000370573 BPIFB1Q8TDL5 484 aa3.58□□□□□ -1.84
MCF2-202ENST00000370573 AENQ8WTP8 325 aaKnown RBP3.58□□□□□ -1.84
MCF2-202ENST00000370573 OSCP1Q8WVF1 389 aa3.58□□□□□ -1.84
MCF2-202ENST00000370573 NRG4Q8WWG1 115 aa3.58□□□□□ -1.84
MCF2-202ENST00000370573 RUBCNQ92622 972 aa3.58□□□□□ -1.84
MCF2-202ENST00000370573 PRCCQ92733 491 aaPredicted RBP3.58□□□□□ -1.84
MCF2-202ENST00000370573 FGF14Q92915 247 aa3.58□□□□□ -1.84
MCF2-202ENST00000370573 FATE1Q969F0 183 aa3.58□□□□□ -1.84
MCF2-202ENST00000370573 DACT3Q96B18 629 aaPredicted RBP3.58□□□□□ -1.84
MCF2-202ENST00000370573 FOXRED1Q96CU9 486 aaPredicted RBP3.58□□□□□ -1.84
MCF2-202ENST00000370573 SNF8Q96H20 258 aa3.58□□□□□ -1.84
MCF2-202ENST00000370573 SERINC2Q96SA4 455 aa3.58□□□□□ -1.84
MCF2-202ENST00000370573 FEM1AQ9BSK4 669 aa3.58□□□□□ -1.84
MCF2-202ENST00000370573 RAB17Q9H0T7 212 aa3.58□□□□□ -1.84
MCF2-202ENST00000370573 ZCCHC4Q9H5U6 513 aa3.58□□□□□ -1.84
MCF2-202ENST00000370573 KIF9Q9HAQ2 790 aa3.58□□□□□ -1.84
MCF2-202ENST00000370573 PDFQ9HBH1 243 aa3.58□□□□□ -1.84
MCF2-202ENST00000370573 HPS4Q9NQG7 708 aa3.58□□□□□ -1.84
MCF2-202ENST00000370573 SPHK2Q9NRA0 654 aa3.58□□□□□ -1.84
MCF2-202ENST00000370573 FAM114A2Q9NRY5 505 aa3.58□□□□□ -1.84
MCF2-202ENST00000370573 DUS2Q9NX74 493 aaKnown RBP3.58□□□□□ -1.84
MCF2-202ENST00000370573 PAK5Q9P286 719 aa3.58□□□□□ -1.84
MCF2-202ENST00000370573 ANAPC5Q9UJX4 755 aa3.58□□□□□ -1.84
MCF2-202ENST00000370573 PCDHB1Q9Y5F3 818 aa3.58□□□□□ -1.84
MCF2-202ENST00000370573 SNX13Q9Y5W8 968 aa3.58□□□□□ -1.84
MCF2-202ENST00000370573 SPTBN5Q9NRC6 3674 aaKnown RBP3.58□□□□□ -1.84
MCF2-202ENST00000370573 DENND4AQ7Z401 1863 aa3.58□□□□□ -1.84
MCF2-202ENST00000370573 A0A088AWK7 358 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 NEDD8-MDP1E9PL57 170 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 MUSKO15146 869 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 TRIM13O60858 407 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 OPHN1O60890 802 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 GJB3O75712 270 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 TMEM63AO94886 807 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 HLA-DQB2P05538 268 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 TYRP14679 529 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 KCNA5P22460 613 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 PSMB4P28070 264 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 CSKP41240 450 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 GRIA1P42261 906 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 SLC6A11P48066 632 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 IFNAR2P48551 515 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 PLK1P53350 603 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 IL10RBQ08334 325 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 NIPAL4Q0D2K0 466 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 FCHO2Q0JRZ9 810 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 CUL1Q13616 776 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 KCNJ11Q14654 390 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 CYTH1Q15438 398 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 PARP6Q2NL67 630 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 BEND6Q5SZJ8 279 aaPredicted RBP3.57□□□□□ -1.84
MCF2-202ENST00000370573 UBAP2Q5T6F2 1119 aaKnown RBP3.57□□□□□ -1.84
MCF2-202ENST00000370573 INTS11Q5TA45 600 aaKnown RBP3.57□□□□□ -1.84
MCF2-202ENST00000370573 LINGO4Q6UY18 593 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 ZNF783Q6ZMS7 281 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 PID1Q7Z2X4 250 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 MFN1Q8IWA4 741 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 MFSD6LQ8IWD5 586 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 ZZZ3Q8IYH5 903 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 DEFB123Q8N688 67 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 TEX26Q8N6G2 289 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 NAT8LQ8N9F0 302 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 EIF1ADQ8N9N8 165 aaKnown RBP3.57□□□□□ -1.84
MCF2-202ENST00000370573 SYT8Q8NBV8 401 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 LRRC45Q96CN5 670 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 OTUB2Q96DC9 234 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 NSMCE3Q96MG7 304 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 GDAP1L1Q96MZ0 367 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 AGAP3Q96P47 875 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 KXD1Q9BQD3 176 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 SYT3Q9BQG1 590 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 MLPHQ9BV36 600 aaPredicted RBP3.57□□□□□ -1.84
MCF2-202ENST00000370573 SORBS1Q9BX66 1292 aaKnown RBP3.57□□□□□ -1.84
MCF2-202ENST00000370573 BBS2Q9BXC9 721 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 TXLNGYQ9BZA5 131 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 EBF3Q9H4W6 596 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 UBE2ZQ9H832 354 aaPredicted RBP3.57□□□□□ -1.84
MCF2-202ENST00000370573 GLOD4Q9HC38 313 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 ZFP14Q9HCL3 533 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 RBM22Q9NW64 420 aaKnown RBP eCLIP3.57□□□□□ -1.84
MCF2-202ENST00000370573 DONSONQ9NYP3 566 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 USP36Q9P275 1121 aaKnown RBP3.57□□□□□ -1.84
MCF2-202ENST00000370573 IFT80Q9P2H3 777 aaPredicted RBP3.57□□□□□ -1.84
MCF2-202ENST00000370573 FBXO10Q9UK96 956 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 CCDC151A5D8V7 595 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 ANHXE9PGG2 379 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 GOLGA8MH3BSY2 632 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 H7BY64 318 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 EIF3FO00303 357 aaPredicted RBP3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms