RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 OXNAD1Q96HP4 312 aaPredicted RBP6.82□□□□□ -1.32
CSDE1-204ENST00000369530 ZNF597Q96LX8 424 aa6.82□□□□□ -1.32
CSDE1-204ENST00000369530 SP140LQ9H930 580 aa6.82□□□□□ -1.32
CSDE1-204ENST00000369530 TAS2R7Q9NYW3 318 aa6.82□□□□□ -1.32
CSDE1-204ENST00000369530 PCDHGB4Q9UN71 923 aa6.82□□□□□ -1.32
CSDE1-204ENST00000369530 RNF11Q9Y3C5 154 aa6.82□□□□□ -1.32
CSDE1-204ENST00000369530 PCDHGB5Q9Y5G0 923 aa6.82□□□□□ -1.32
CSDE1-204ENST00000369530 PSMD12O00232 456 aaPredicted RBP6.82□□□□□ -1.32
CSDE1-204ENST00000369530 S100BP04271 92 aaPredicted RBP6.82□□□□□ -1.32
CSDE1-204ENST00000369530 CSNK1DP48730 415 aa6.82□□□□□ -1.32
CSDE1-204ENST00000369530 AIF1P55008 147 aa6.82□□□□□ -1.32
CSDE1-204ENST00000369530 PLK5Q496M5 336 aa6.82□□□□□ -1.32
CSDE1-204ENST00000369530 SH3PXD2AQ5TCZ1 1133 aa6.82□□□□□ -1.32
CSDE1-204ENST00000369530 C11orf63Q6NUN7 778 aa6.82□□□□□ -1.32
CSDE1-204ENST00000369530 TTC27Q6P3X3 843 aa6.82□□□□□ -1.32
CSDE1-204ENST00000369530 TPRG1Q6ZUI0 275 aa6.82□□□□□ -1.32
CSDE1-204ENST00000369530 IGFN1Q86VF2 1251 aa6.82□□□□□ -1.32
CSDE1-204ENST00000369530 PSTKQ8IV42 348 aaKnown RBP6.82□□□□□ -1.32
CSDE1-204ENST00000369530 MDGA1Q8NFP4 955 aa6.82□□□□□ -1.32
CSDE1-204ENST00000369530 UBA3Q8TBC4 463 aa6.82□□□□□ -1.32
CSDE1-204ENST00000369530 ASB12Q8WXK4 309 aa6.82□□□□□ -1.32
CSDE1-204ENST00000369530 ALG3Q92685 438 aa6.82□□□□□ -1.32
CSDE1-204ENST00000369530 MCEEQ96PE7 176 aa6.82□□□□□ -1.32
CSDE1-204ENST00000369530 DHRS4Q9BTZ2 278 aa6.82□□□□□ -1.32
CSDE1-204ENST00000369530 TP63Q9H3D4 680 aaPredicted RBP6.82□□□□□ -1.32
CSDE1-204ENST00000369530 PARVAQ9NVD7 372 aa6.82□□□□□ -1.32
CSDE1-204ENST00000369530 NINJ2Q9NZG7 142 aa6.82□□□□□ -1.32
CSDE1-204ENST00000369530 TBC1D14Q9P2M4 693 aa6.82□□□□□ -1.32
CSDE1-204ENST00000369530 SLC8A2Q9UPR5 921 aa6.82□□□□□ -1.32
CSDE1-204ENST00000369530 KLF2Q9Y5W3 355 aaPredicted RBP6.82□□□□□ -1.32
CSDE1-204ENST00000369530 H3BMQ9 156 aa6.82□□□□□ -1.32
CSDE1-204ENST00000369530 M0QYV0 167 aa6.82□□□□□ -1.32
CSDE1-204ENST00000369530 TLR5O60602 858 aa6.82□□□□□ -1.32
CSDE1-204ENST00000369530 TULP3O75386 442 aa6.82□□□□□ -1.32
CSDE1-204ENST00000369530 GRAP2O75791 330 aa6.82□□□□□ -1.32
CSDE1-204ENST00000369530 STAMBPO95630 424 aa6.82□□□□□ -1.32
CSDE1-204ENST00000369530 SLC26A3P40879 764 aa6.82□□□□□ -1.32
CSDE1-204ENST00000369530 SLCO1A2P46721 670 aa6.82□□□□□ -1.32
CSDE1-204ENST00000369530 CLK3P49761 638 aaKnown RBP6.82□□□□□ -1.32
CSDE1-204ENST00000369530 S100A12P80511 92 aa6.82□□□□□ -1.32
CSDE1-204ENST00000369530 RAD51Q06609 339 aa6.82□□□□□ -1.32
CSDE1-204ENST00000369530 ADIGQ0VDE8 80 aa6.82□□□□□ -1.32
CSDE1-204ENST00000369530 TARDBPQ13148 414 aaKnown RBP eCLIP6.82□□□□□ -1.32
CSDE1-204ENST00000369530 MAMLD1Q13495 774 aa6.82□□□□□ -1.32
CSDE1-204ENST00000369530 FBXO43Q4G163 708 aa6.82□□□□□ -1.32
CSDE1-204ENST00000369530 ADGRF1Q5T601 910 aa6.82□□□□□ -1.32
CSDE1-204ENST00000369530 OR6B2Q6IFH4 312 aa6.82□□□□□ -1.32
CSDE1-204ENST00000369530 ZFP1Q6P2D0 407 aa6.82□□□□□ -1.32
CSDE1-204ENST00000369530 PQLC1Q8N2U9 271 aa6.82□□□□□ -1.32
CSDE1-204ENST00000369530 TMEM145Q8NBT3 493 aa6.82□□□□□ -1.32
CSDE1-204ENST00000369530 ISG20Q96AZ6 181 aaKnown RBP6.82□□□□□ -1.32
CSDE1-204ENST00000369530 VMP1Q96GC9 406 aa6.82□□□□□ -1.32
CSDE1-204ENST00000369530 COG8Q96MW5 612 aa6.82□□□□□ -1.32
CSDE1-204ENST00000369530 C1orf50Q9BV19 199 aa6.82□□□□□ -1.32
CSDE1-204ENST00000369530 GPN2Q9H9Y4 310 aaPredicted RBP6.82□□□□□ -1.32
CSDE1-204ENST00000369530 KCNK9Q9NPC2 374 aa6.82□□□□□ -1.32
CSDE1-204ENST00000369530 TLR8Q9NR97 1041 aaKnown RBP6.82□□□□□ -1.32
CSDE1-204ENST00000369530 OLA1Q9NTK5 396 aaKnown RBP6.82□□□□□ -1.32
CSDE1-204ENST00000369530 FAM49BQ9NUQ9 324 aa6.82□□□□□ -1.32
CSDE1-204ENST00000369530 DNMT3LQ9UJW3 386 aa6.82□□□□□ -1.32
CSDE1-204ENST00000369530 NUP50Q9UKX7 468 aa6.82□□□□□ -1.32
CSDE1-204ENST00000369530 TRAF6Q9Y4K3 522 aa6.82□□□□□ -1.32
CSDE1-204ENST00000369530 HEMK1Q9Y5R4 338 aaPredicted RBP6.82□□□□□ -1.32
CSDE1-204ENST00000369530 WNT6Q9Y6F9 365 aa6.82□□□□□ -1.32
CSDE1-204ENST00000369530 FCHO1O14526 889 aa6.81□□□□□ -1.32
CSDE1-204ENST00000369530 MMP2P08253 660 aa6.81□□□□□ -1.32
CSDE1-204ENST00000369530 RGS7P49802 495 aa6.81□□□□□ -1.32
CSDE1-204ENST00000369530 PTK6Q13882 451 aa6.81□□□□□ -1.32
CSDE1-204ENST00000369530 SLC14A2Q15849 920 aa6.81□□□□□ -1.32
CSDE1-204ENST00000369530 CCDC137Q6PK04 289 aaKnown RBP6.81□□□□□ -1.32
CSDE1-204ENST00000369530 TMEM151BQ8IW70 566 aa6.81□□□□□ -1.32
CSDE1-204ENST00000369530 MCOLN2Q8IZK6 566 aa6.81□□□□□ -1.32
CSDE1-204ENST00000369530 JOSD2Q8TAC2 188 aa6.81□□□□□ -1.32
CSDE1-204ENST00000369530 ANKRD49Q8WVL7 239 aa6.81□□□□□ -1.32
CSDE1-204ENST00000369530 ATG4AQ8WYN0 398 aa6.81□□□□□ -1.32
CSDE1-204ENST00000369530 C18orf8Q96DM3 657 aa6.81□□□□□ -1.32
CSDE1-204ENST00000369530 VPS35Q96QK1 796 aa6.81□□□□□ -1.32
CSDE1-204ENST00000369530 CDRT15Q96T59 188 aa6.81□□□□□ -1.32
CSDE1-204ENST00000369530 SERHL2Q9H4I8 314 aa6.81□□□□□ -1.32
CSDE1-204ENST00000369530 POLMQ9NP87 494 aaPredicted RBP6.81□□□□□ -1.32
CSDE1-204ENST00000369530 AKIP1Q9NQ31 210 aa6.81□□□□□ -1.32
CSDE1-204ENST00000369530 VPS51Q9UID3 782 aa6.81□□□□□ -1.32
CSDE1-204ENST00000369530 CORINQ9Y5Q5 1042 aa6.81□□□□□ -1.32
CSDE1-204ENST00000369530 SYNJ2BP-COX16A0A087WUM0 186 aa6.81□□□□□ -1.32
CSDE1-204ENST00000369530 PABPN1LA6NDY0 278 aaKnown RBP6.81□□□□□ -1.32
CSDE1-204ENST00000369530 ATE1O95260 518 aa6.81□□□□□ -1.32
CSDE1-204ENST00000369530 KRT1P04264 644 aa6.81□□□□□ -1.32
CSDE1-204ENST00000369530 DCNP07585 359 aaKnown RBP6.81□□□□□ -1.32
CSDE1-204ENST00000369530 SRPRAP08240 638 aaKnown RBP6.81□□□□□ -1.32
CSDE1-204ENST00000369530 CPB1P15086 417 aa6.81□□□□□ -1.32
CSDE1-204ENST00000369530 IL1R2P27930 398 aa6.81□□□□□ -1.32
CSDE1-204ENST00000369530 GDI1P31150 447 aa6.81□□□□□ -1.32
CSDE1-204ENST00000369530 TKTL1P51854 596 aa6.81□□□□□ -1.32
CSDE1-204ENST00000369530 STX1BP61266 288 aa6.81□□□□□ -1.32
CSDE1-204ENST00000369530 PON2Q15165 354 aa6.81□□□□□ -1.32
CSDE1-204ENST00000369530 PLA2G4EQ3MJ16 856 aa6.81□□□□□ -1.32
CSDE1-204ENST00000369530 SPOUT1Q5T280 376 aaKnown RBP6.81□□□□□ -1.32
CSDE1-204ENST00000369530 ERAP2Q6P179 960 aa6.81□□□□□ -1.32
CSDE1-204ENST00000369530 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.81□□□□□ -1.32
CSDE1-204ENST00000369530 RAVER1Q8IY67 606 aaKnown RBP6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms