RNA–Protein interactions for RNA: ENST00000368838.1

SNX27-201, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best) BASIC

Gene SNX27, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-201ENST00000368838 SNUPNO95149 360 aaKnown RBP8.72□□□□□ -1.01
SNX27-201ENST00000368838 WISP3O95389 354 aaPredicted RBP8.72□□□□□ -1.01
SNX27-201ENST00000368838 S1PR4O95977 384 aa8.72□□□□□ -1.01
SNX27-201ENST00000368838 FAM107AO95990 144 aa8.72□□□□□ -1.01
SNX27-201ENST00000368838 PRNPP04156 253 aa8.72□□□□□ -1.01
SNX27-201ENST00000368838 IGHV4-34P06331 123 aa8.72□□□□□ -1.01
SNX27-201ENST00000368838 RPS3P23396 243 aaKnown RBP eCLIP8.72□□□□□ -1.01
SNX27-201ENST00000368838 GABRB3P28472 473 aa8.72□□□□□ -1.01
SNX27-201ENST00000368838 HPDP32754 393 aaPredicted RBP8.72□□□□□ -1.01
SNX27-201ENST00000368838 PPARGP37231 505 aaPredicted RBP8.72□□□□□ -1.01
SNX27-201ENST00000368838 RECQLP46063 649 aaPredicted RBP8.72□□□□□ -1.01
SNX27-201ENST00000368838 CD151P48509 253 aa8.72□□□□□ -1.01
SNX27-201ENST00000368838 PSMD8P48556 350 aa8.72□□□□□ -1.01
SNX27-201ENST00000368838 TTPAP49638 278 aa8.72□□□□□ -1.01
SNX27-201ENST00000368838 STK19P49842 368 aaPredicted RBP8.72□□□□□ -1.01
SNX27-201ENST00000368838 AFF3P51826 1226 aaKnown RBP8.72□□□□□ -1.01
SNX27-201ENST00000368838 CCNHP51946 323 aaPredicted RBP8.72□□□□□ -1.01
SNX27-201ENST00000368838 STC1P52823 247 aa8.72□□□□□ -1.01
SNX27-201ENST00000368838 METAP1P53582 386 aa8.72□□□□□ -1.01
SNX27-201ENST00000368838 PRKAA2P54646 552 aa8.72□□□□□ -1.01
SNX27-201ENST00000368838 WDR4P57081 412 aaKnown RBP8.72□□□□□ -1.01
SNX27-201ENST00000368838 ST8SIA6P61647 398 aa8.72□□□□□ -1.01
SNX27-201ENST00000368838 PRAMEP78395 509 aa8.72□□□□□ -1.01
SNX27-201ENST00000368838 XIAPP98170 497 aa8.72□□□□□ -1.01
SNX27-201ENST00000368838 MTM1Q13496 603 aa8.72□□□□□ -1.01
SNX27-201ENST00000368838 ELAVL3Q14576 367 aaKnown RBP8.72□□□□□ -1.01
SNX27-201ENST00000368838 PCSK7Q16549 785 aa8.72□□□□□ -1.01
SNX27-201ENST00000368838 PDK4Q16654 411 aa8.72□□□□□ -1.01
SNX27-201ENST00000368838 KIF26BQ2KJY2 2108 aa8.72□□□□□ -1.01
SNX27-201ENST00000368838 CCDC153Q494R4 210 aa8.72□□□□□ -1.01
SNX27-201ENST00000368838 LYPLAL1Q5VWZ2 237 aa8.72□□□□□ -1.01
SNX27-201ENST00000368838 ZNF776Q68DI1 518 aaPredicted RBP8.72□□□□□ -1.01
SNX27-201ENST00000368838 THSD4Q6ZMP0 1018 aa8.72□□□□□ -1.01
SNX27-201ENST00000368838 DPY19L3Q6ZPD9 716 aa8.72□□□□□ -1.01
SNX27-201ENST00000368838 USP45Q70EL2 814 aa8.72□□□□□ -1.01
SNX27-201ENST00000368838 STRA8Q7Z7C7 330 aa8.72□□□□□ -1.01
SNX27-201ENST00000368838 SDCCAG8Q86SQ7 713 aaPredicted RBP8.72□□□□□ -1.01
SNX27-201ENST00000368838 PROSER1Q86XN7 944 aa8.72□□□□□ -1.01
SNX27-201ENST00000368838 GATAD2AQ86YP4 633 aa8.72□□□□□ -1.01
SNX27-201ENST00000368838 TRIM42Q8IWZ5 723 aa8.72□□□□□ -1.01
SNX27-201ENST00000368838 STK40Q8N2I9 435 aa8.72□□□□□ -1.01
SNX27-201ENST00000368838 OR4L1Q8NH43 312 aa8.72□□□□□ -1.01
SNX27-201ENST00000368838 RDH11Q8TC12 318 aa8.72□□□□□ -1.01
SNX27-201ENST00000368838 FAM131CQ96AQ9 280 aa8.72□□□□□ -1.01
SNX27-201ENST00000368838 GRAMD1AQ96CP6 724 aa8.72□□□□□ -1.01
SNX27-201ENST00000368838 TSPAN17Q96FV3 270 aa8.72□□□□□ -1.01
SNX27-201ENST00000368838 SERAC1Q96JX3 654 aa8.72□□□□□ -1.01
SNX27-201ENST00000368838 TBATAQ96M53 351 aa8.72□□□□□ -1.01
SNX27-201ENST00000368838 PLEKHG4BQ96PX9 1271 aa8.72□□□□□ -1.01
SNX27-201ENST00000368838 ORAI3Q9BRQ5 295 aa8.72□□□□□ -1.01
SNX27-201ENST00000368838 TRIM56Q9BRZ2 755 aaKnown RBP8.72□□□□□ -1.01
SNX27-201ENST00000368838 SLC6A16Q9GZN6 736 aa8.72□□□□□ -1.01
SNX27-201ENST00000368838 RSPH9Q9H1X1 276 aaPredicted RBP8.72□□□□□ -1.01
SNX27-201ENST00000368838 EBF2Q9HAK2 575 aa8.72□□□□□ -1.01
SNX27-201ENST00000368838 SMOXQ9NWM0 555 aa8.72□□□□□ -1.01
SNX27-201ENST00000368838 TOR4AQ9NXH8 423 aa8.72□□□□□ -1.01
SNX27-201ENST00000368838 FBXL12Q9NXK8 326 aa8.72□□□□□ -1.01
SNX27-201ENST00000368838 KLHL42Q9P2K6 505 aa8.72□□□□□ -1.01
SNX27-201ENST00000368838 SUN2Q9UH99 717 aa8.72□□□□□ -1.01
SNX27-201ENST00000368838 SLCO3A1Q9UIG8 710 aa8.72□□□□□ -1.01
SNX27-201ENST00000368838 GGT7Q9UJ14 662 aa8.72□□□□□ -1.01
SNX27-201ENST00000368838 MID2Q9UJV3 735 aa8.72□□□□□ -1.01
SNX27-201ENST00000368838 APOBEC2Q9Y235 224 aaKnown RBP8.72□□□□□ -1.01
SNX27-201ENST00000368838 SPO11Q9Y5K1 396 aa8.72□□□□□ -1.01
SNX27-201ENST00000368838 ACTL7AQ9Y615 435 aa8.72□□□□□ -1.01
SNX27-201ENST00000368838 PSAT1Q9Y617 370 aa8.72□□□□□ -1.01
SNX27-201ENST00000368838 WASF2Q9Y6W5 498 aa8.72□□□□□ -1.01
SNX27-201ENST00000368838 ANKRD36A6QL64 1941 aa8.71□□□□□ -1.01
SNX27-201ENST00000368838 ASXL3Q9C0F0 2248 aa8.71□□□□□ -1.01
SNX27-201ENST00000368838 EDDM13A0A1B0GTR0 161 aa8.71□□□□□ -1.02
SNX27-201ENST00000368838 FAM221BA6H8Z2 402 aa8.71□□□□□ -1.02
SNX27-201ENST00000368838 SMIM23A6NLE4 172 aa8.71□□□□□ -1.02
SNX27-201ENST00000368838 F5H423 210 aaPredicted RBP8.71□□□□□ -1.02
SNX27-201ENST00000368838 COPEO14579 308 aa8.71□□□□□ -1.02
SNX27-201ENST00000368838 STX7O15400 261 aaKnown RBP8.71□□□□□ -1.02
SNX27-201ENST00000368838 CD3EAPO15446 510 aaKnown RBP8.71□□□□□ -1.02
SNX27-201ENST00000368838 UGT1A9O60656 530 aa8.71□□□□□ -1.02
SNX27-201ENST00000368838 RNASEH2AO75792 299 aaKnown RBP8.71□□□□□ -1.02
SNX27-201ENST00000368838 CAPNS1P04632 268 aa8.71□□□□□ -1.02
SNX27-201ENST00000368838 CREB1P16220 341 aa8.71□□□□□ -1.02
SNX27-201ENST00000368838 TYK2P29597 1187 aa8.71□□□□□ -1.02
SNX27-201ENST00000368838 FOXN2P32314 431 aa8.71□□□□□ -1.02
SNX27-201ENST00000368838 SKIV2L2P42285 1042 aaKnown RBP8.71□□□□□ -1.02
SNX27-201ENST00000368838 SLC1A2P43004 574 aa8.71□□□□□ -1.02
SNX27-201ENST00000368838 NAA20P61599 178 aa8.71□□□□□ -1.02
SNX27-201ENST00000368838 PDE1CQ14123 709 aaPredicted RBP8.71□□□□□ -1.02
SNX27-201ENST00000368838 ITIH4Q14624 930 aa8.71□□□□□ -1.02
SNX27-201ENST00000368838 TEAD4Q15561 434 aa8.71□□□□□ -1.02
SNX27-201ENST00000368838 CST6Q15828 149 aa8.71□□□□□ -1.02
SNX27-201ENST00000368838 TSNAXIP1Q2TAA8 658 aa8.71□□□□□ -1.02
SNX27-201ENST00000368838 COL28A1Q2UY09 1125 aa8.71□□□□□ -1.02
SNX27-201ENST00000368838 POM121L1PQ3SYA9 428 aa8.71□□□□□ -1.02
SNX27-201ENST00000368838 TTC31Q49AM3 519 aaPredicted RBP8.71□□□□□ -1.02
SNX27-201ENST00000368838 ZNF805Q5CZA5 627 aa8.71□□□□□ -1.02
SNX27-201ENST00000368838 KIAA0895LQ68EN5 471 aa8.71□□□□□ -1.02
SNX27-201ENST00000368838 FAM45BPQ6NSW5 357 aa8.71□□□□□ -1.02
SNX27-201ENST00000368838 IL27RAQ6UWB1 636 aa8.71□□□□□ -1.02
SNX27-201ENST00000368838 GDPD4Q6W3E5 623 aa8.71□□□□□ -1.02
SNX27-201ENST00000368838 GLT6D1Q7Z4J2 308 aa8.71□□□□□ -1.02
SNX27-201ENST00000368838 CAMK1DQ8IU85 385 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms