RNA–Protein interactions for RNA: ENST00000368671.3

CLRN3-201, Transcript of clarin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLRN3, Length 1,152 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3-201ENST00000368671 RFX6Q8HWS3 928 aa10.18□□□□□ -0.78
CLRN3-201ENST00000368671 RASGRP3Q8IV61 690 aa10.18□□□□□ -0.78
CLRN3-201ENST00000368671 PLD5Q8N7P1 536 aa10.18□□□□□ -0.78
CLRN3-201ENST00000368671 GALNT6Q8NCL4 622 aa10.18□□□□□ -0.78
CLRN3-201ENST00000368671 RSC1A1Q92681 617 aa10.18□□□□□ -0.78
CLRN3-201ENST00000368671 IQCDQ96DY2 449 aa10.18□□□□□ -0.78
CLRN3-201ENST00000368671 STAMBPL1Q96FJ0 436 aa10.18□□□□□ -0.78
CLRN3-201ENST00000368671 IMP4Q96G21 291 aaKnown RBP10.18□□□□□ -0.78
CLRN3-201ENST00000368671 TRIB3Q96RU7 358 aa10.18□□□□□ -0.78
CLRN3-201ENST00000368671 MAK16Q9BXY0 300 aaKnown RBP10.18□□□□□ -0.78
CLRN3-201ENST00000368671 UCK1Q9HA47 277 aa10.18□□□□□ -0.78
CLRN3-201ENST00000368671 MAGEE1Q9HCI5 957 aa10.18□□□□□ -0.78
CLRN3-201ENST00000368671 BPIFA1Q9NP55 256 aa10.18□□□□□ -0.78
CLRN3-201ENST00000368671 RAD18Q9NS91 495 aa10.18□□□□□ -0.78
CLRN3-201ENST00000368671 IFNKQ9P0W0 207 aa10.18□□□□□ -0.78
CLRN3-201ENST00000368671 ANAPC2Q9UJX6 822 aa10.18□□□□□ -0.78
CLRN3-201ENST00000368671 CROTQ9UKG9 612 aa10.18□□□□□ -0.78
CLRN3-201ENST00000368671 TENM4Q6N022 2769 aa10.18□□□□□ -0.78
CLRN3-201ENST00000368671 HELZ2Q9BYK8 2649 aaKnown RBP10.17□□□□□ -0.78
CLRN3-201ENST00000368671 OR52A4PA6NMU1 304 aa10.17□□□□□ -0.78
CLRN3-201ENST00000368671 GPR89AB7ZAQ6 455 aa10.17□□□□□ -0.78
CLRN3-201ENST00000368671 PPP1R12AO14974 1030 aaPredicted RBP10.17□□□□□ -0.78
CLRN3-201ENST00000368671 CHUKO15111 745 aa10.17□□□□□ -0.78
CLRN3-201ENST00000368671 KATNA1O75449 491 aa10.17□□□□□ -0.78
CLRN3-201ENST00000368671 KIAA0754O94854 1291 aa10.17□□□□□ -0.78
CLRN3-201ENST00000368671 CDK14O94921 469 aa10.17□□□□□ -0.78
CLRN3-201ENST00000368671 NDUFA10O95299 355 aa10.17□□□□□ -0.78
CLRN3-201ENST00000368671 MT-CYBP00156 380 aaPredicted RBP10.17□□□□□ -0.78
CLRN3-201ENST00000368671 KRT1P04264 644 aa10.17□□□□□ -0.78
CLRN3-201ENST00000368671 GPR89BP0CG08 455 aa10.17□□□□□ -0.78
CLRN3-201ENST00000368671 BRAFP15056 766 aa10.17□□□□□ -0.78
CLRN3-201ENST00000368671 BPIP17213 487 aa10.17□□□□□ -0.78
CLRN3-201ENST00000368671 NR1D1P20393 614 aa10.17□□□□□ -0.78
CLRN3-201ENST00000368671 IDSP22304 550 aa10.17□□□□□ -0.78
CLRN3-201ENST00000368671 DRG2P55039 364 aaKnown RBP10.17□□□□□ -0.78
CLRN3-201ENST00000368671 DYNLT1P63172 113 aa10.17□□□□□ -0.78
CLRN3-201ENST00000368671 CDK18Q07002 472 aa10.17□□□□□ -0.78
CLRN3-201ENST00000368671 GTF2H3Q13889 308 aa10.17□□□□□ -0.78
CLRN3-201ENST00000368671 ERV3-1Q14264 604 aa10.17□□□□□ -0.78
CLRN3-201ENST00000368671 SLC18A3Q16572 532 aa10.17□□□□□ -0.78
CLRN3-201ENST00000368671 KHDC1Q4VXA5 237 aaKnown RBP10.17□□□□□ -0.78
CLRN3-201ENST00000368671 LACTB2Q53H82 288 aaPredicted RBP10.17□□□□□ -0.78
CLRN3-201ENST00000368671 PDPK2PQ6A1A2 396 aa10.17□□□□□ -0.78
CLRN3-201ENST00000368671 SLC9A4Q6AI14 798 aa10.17□□□□□ -0.78
CLRN3-201ENST00000368671 CCDC70Q6NSX1 233 aa10.17□□□□□ -0.78
CLRN3-201ENST00000368671 IRGCQ6NXR0 463 aa10.17□□□□□ -0.78
CLRN3-201ENST00000368671 FAM92BQ6ZTR7 304 aa10.17□□□□□ -0.78
CLRN3-201ENST00000368671 SPATA22Q8NHS9 363 aa10.17□□□□□ -0.78
CLRN3-201ENST00000368671 GDAP1Q8TB36 358 aa10.17□□□□□ -0.78
CLRN3-201ENST00000368671 CXorf40BQ96DE9 158 aa10.17□□□□□ -0.78
CLRN3-201ENST00000368671 TIMM29Q9BSF4 260 aa10.17□□□□□ -0.78
CLRN3-201ENST00000368671 SLC25A51Q9H1U9 297 aa10.17□□□□□ -0.78
CLRN3-201ENST00000368671 DEF6Q9H4E7 631 aa10.17□□□□□ -0.78
CLRN3-201ENST00000368671 ZNF768Q9H5H4 540 aaKnown RBP10.17□□□□□ -0.78
CLRN3-201ENST00000368671 POT1Q9NUX5 634 aa10.17□□□□□ -0.78
CLRN3-201ENST00000368671 UBP1Q9NZI7 540 aa10.17□□□□□ -0.78
CLRN3-201ENST00000368671 NFKBIL1Q9UBC1 381 aaPredicted RBP10.17□□□□□ -0.78
CLRN3-201ENST00000368671 LCMT1Q9UIC8 334 aa10.17□□□□□ -0.78
CLRN3-201ENST00000368671 TP53TG5Q9Y2B4 290 aa10.17□□□□□ -0.78
CLRN3-201ENST00000368671 SPO11Q9Y5K1 396 aa10.17□□□□□ -0.78
CLRN3-201ENST00000368671 CDC14CA4D256 554 aa10.16□□□□□ -0.78
CLRN3-201ENST00000368671 PRR19A6NJB7 356 aa10.16□□□□□ -0.78
CLRN3-201ENST00000368671 AURKAO14965 403 aa10.16□□□□□ -0.78
CLRN3-201ENST00000368671 TOX3O15405 576 aaPredicted RBP10.16□□□□□ -0.78
CLRN3-201ENST00000368671 KIF1CO43896 1103 aaKnown RBP10.16□□□□□ -0.78
CLRN3-201ENST00000368671 VEGFDO43915 354 aa10.16□□□□□ -0.78
CLRN3-201ENST00000368671 PMPCBO75439 489 aa10.16□□□□□ -0.78
CLRN3-201ENST00000368671 TMEM253P0C7T8 217 aa10.16□□□□□ -0.78
CLRN3-201ENST00000368671 TNNT1P13805 278 aa10.16□□□□□ -0.78
CLRN3-201ENST00000368671 CAPZBP47756 277 aa10.16□□□□□ -0.78
CLRN3-201ENST00000368671 SMCPP49901 116 aaPredicted RBP10.16□□□□□ -0.78
CLRN3-201ENST00000368671 SRSF1Q07955 248 aaKnown RBP eCLIP10.16□□□□□ -0.78
CLRN3-201ENST00000368671 GPR18Q14330 331 aa10.16□□□□□ -0.78
CLRN3-201ENST00000368671 PDK1Q15118 436 aa10.16□□□□□ -0.78
CLRN3-201ENST00000368671 NOMO1Q15155 1222 aa10.16□□□□□ -0.78
CLRN3-201ENST00000368671 ODF2Q5BJF6 829 aa10.16□□□□□ -0.78
CLRN3-201ENST00000368671 CACHD1Q5VU97 1274 aa10.16□□□□□ -0.78
CLRN3-201ENST00000368671 ABRAXAS1Q6UWZ7 409 aa10.16□□□□□ -0.78
CLRN3-201ENST00000368671 TRAPPC5Q8IUR0 188 aa10.16□□□□□ -0.78
CLRN3-201ENST00000368671 ZNF547Q8IVP9 402 aa10.16□□□□□ -0.78
CLRN3-201ENST00000368671 SLC35G2Q8TBE7 412 aa10.16□□□□□ -0.78
CLRN3-201ENST00000368671 GLOD4Q9HC38 313 aa10.16□□□□□ -0.78
CLRN3-201ENST00000368671 ANKMY1Q9P2S6 941 aa10.16□□□□□ -0.78
CLRN3-201ENST00000368671 LNPEPQ9UIQ6 1025 aa10.16□□□□□ -0.78
CLRN3-201ENST00000368671 KCTD3Q9Y597 815 aa10.16□□□□□ -0.78
CLRN3-201ENST00000368671 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.16□□□□□ -0.78
CLRN3-201ENST00000368671 A0A0A6YYK5 440 aaPredicted RBP10.15□□□□□ -0.78
CLRN3-201ENST00000368671 C3orf70A6NLC5 250 aaPredicted RBP10.15□□□□□ -0.78
CLRN3-201ENST00000368671 ZNF487B1APH4 448 aa10.15□□□□□ -0.78
CLRN3-201ENST00000368671 F5H423 210 aaPredicted RBP10.15□□□□□ -0.78
CLRN3-201ENST00000368671 SPAG6O75602 509 aa10.15□□□□□ -0.78
CLRN3-201ENST00000368671 NDST3O95803 873 aa10.15□□□□□ -0.78
CLRN3-201ENST00000368671 FURINP09958 794 aa10.15□□□□□ -0.78
CLRN3-201ENST00000368671 FGF5P12034 268 aa10.15□□□□□ -0.78
CLRN3-201ENST00000368671 ZFXP17010 805 aaPredicted RBP10.15□□□□□ -0.78
CLRN3-201ENST00000368671 VCLP18206 1134 aa10.15□□□□□ -0.78
CLRN3-201ENST00000368671 HALP42357 657 aa10.15□□□□□ -0.78
CLRN3-201ENST00000368671 PPP1CAP62136 330 aa10.15□□□□□ -0.78
CLRN3-201ENST00000368671 TMEM115Q12893 351 aaPredicted RBP10.15□□□□□ -0.78
CLRN3-201ENST00000368671 KLRB1Q12918 225 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms