RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 CCL22O00626 93 aa18.63■□□□□ 0.57
CKS1B-203ENST00000368439 SGTAO43765 313 aa18.63■□□□□ 0.57
CKS1B-203ENST00000368439 THRAP10827 490 aa18.63■□□□□ 0.57
CKS1B-203ENST00000368439 ETS1P14921 441 aa18.63■□□□□ 0.57
CKS1B-203ENST00000368439 ITIH1P19827 911 aa18.63■□□□□ 0.57
CKS1B-203ENST00000368439 PSMA3P25788 255 aa18.63■□□□□ 0.57
CKS1B-203ENST00000368439 ETV5P41161 510 aa18.63■□□□□ 0.57
CKS1B-203ENST00000368439 SLC19A1P41440 591 aa18.63■□□□□ 0.57
CKS1B-203ENST00000368439 ABCG1P45844 678 aa18.63■□□□□ 0.57
CKS1B-203ENST00000368439 TMPRSS15P98073 1019 aa18.63■□□□□ 0.57
CKS1B-203ENST00000368439 SNX1Q13596 522 aa18.63■□□□□ 0.57
CKS1B-203ENST00000368439 CCNG2Q16589 344 aa18.63■□□□□ 0.57
CKS1B-203ENST00000368439 PHF19Q5T6S3 580 aa18.63■□□□□ 0.57
CKS1B-203ENST00000368439 AGAP9Q5VTM2 703 aa18.63■□□□□ 0.57
CKS1B-203ENST00000368439 DRICH1Q6PGQ1 229 aaPredicted RBP18.63■□□□□ 0.57
CKS1B-203ENST00000368439 TMEM220Q6QAJ8 160 aa18.63■□□□□ 0.57
CKS1B-203ENST00000368439 LRRC69Q6ZNQ3 347 aa18.63■□□□□ 0.57
CKS1B-203ENST00000368439 SPACA3Q8IXA5 215 aa18.63■□□□□ 0.57
CKS1B-203ENST00000368439 SH3KBP1Q96B97 665 aa18.63■□□□□ 0.57
CKS1B-203ENST00000368439 LRRC45Q96CN5 670 aa18.63■□□□□ 0.57
CKS1B-203ENST00000368439 DNAJC1Q96KC8 554 aaKnown RBP18.63■□□□□ 0.57
CKS1B-203ENST00000368439 CCDC74BQ96LY2 380 aa18.63■□□□□ 0.57
CKS1B-203ENST00000368439 TTC25Q96NG3 672 aa18.63■□□□□ 0.57
CKS1B-203ENST00000368439 ZCCHC2Q9C0B9 1178 aaKnown RBP18.63■□□□□ 0.57
CKS1B-203ENST00000368439 PIH1D1Q9NWS0 290 aaKnown RBP18.63■□□□□ 0.57
CKS1B-203ENST00000368439 ZNF148Q9UQR1 794 aa18.63■□□□□ 0.57
CKS1B-203ENST00000368439 WDR37Q9Y2I8 494 aa18.63■□□□□ 0.57
CKS1B-203ENST00000368439 SSUH2Q9Y2M2 353 aa18.63■□□□□ 0.57
CKS1B-203ENST00000368439 PCDHGA7Q9Y5G6 932 aa18.63■□□□□ 0.57
CKS1B-203ENST00000368439 DNMT3AQ9Y6K1 912 aaPredicted RBP18.63■□□□□ 0.57
CKS1B-203ENST00000368439 OR2AG2A6NM03 316 aa18.62■□□□□ 0.57
CKS1B-203ENST00000368439 H7C0S8 307 aa18.62■□□□□ 0.57
CKS1B-203ENST00000368439 KCNJ13O60928 360 aa18.62■□□□□ 0.57
CKS1B-203ENST00000368439 POP7O75817 140 aaKnown RBP18.62■□□□□ 0.57
CKS1B-203ENST00000368439 SUN1O94901 812 aa18.62■□□□□ 0.57
CKS1B-203ENST00000368439 IDSP22304 550 aa18.62■□□□□ 0.57
CKS1B-203ENST00000368439 RPL10P27635 214 aaKnown RBP18.62■□□□□ 0.57
CKS1B-203ENST00000368439 HADHAP40939 763 aa18.62■□□□□ 0.57
CKS1B-203ENST00000368439 EPHA4P54764 986 aa18.62■□□□□ 0.57
CKS1B-203ENST00000368439 DRG2P55039 364 aaKnown RBP18.62■□□□□ 0.57
CKS1B-203ENST00000368439 TLE3Q04726 772 aa18.62■□□□□ 0.57
CKS1B-203ENST00000368439 TRA2AQ13595 282 aaKnown RBP eCLIP18.62■□□□□ 0.57
CKS1B-203ENST00000368439 SEPT7Q16181 437 aaKnown RBP18.62■□□□□ 0.57
CKS1B-203ENST00000368439 TMEM71Q6P5X7 295 aa18.62■□□□□ 0.57
CKS1B-203ENST00000368439 FAM83HQ6ZRV2 1179 aaPredicted RBP18.62■□□□□ 0.57
CKS1B-203ENST00000368439 PDZD3Q86UT5 571 aa18.62■□□□□ 0.57
CKS1B-203ENST00000368439 RCBTB1Q8NDN9 531 aa18.62■□□□□ 0.57
CKS1B-203ENST00000368439 NAT14Q8WUY8 206 aa18.62■□□□□ 0.57
CKS1B-203ENST00000368439 DPYSL5Q9BPU6 564 aa18.62■□□□□ 0.57
CKS1B-203ENST00000368439 UCK1Q9HA47 277 aa18.62■□□□□ 0.57
CKS1B-203ENST00000368439 NLE1Q9NVX2 485 aaPredicted RBP18.62■□□□□ 0.57
CKS1B-203ENST00000368439 PISDQ9UG56 409 aa18.62■□□□□ 0.57
CKS1B-203ENST00000368439 LOC400499M0QZD8 3231 aa18.61■□□□□ 0.57
CKS1B-203ENST00000368439 PIKFYVEQ9Y2I7 2098 aa18.61■□□□□ 0.57
CKS1B-203ENST00000368439 TRBV5-4A0A0C4DH59 114 aa18.61■□□□□ 0.57
CKS1B-203ENST00000368439 PRAMEF33A0A0G2JMD5 474 aa18.61■□□□□ 0.57
CKS1B-203ENST00000368439 MROH6A6NGR9 719 aa18.61■□□□□ 0.57
CKS1B-203ENST00000368439 LILRA5A6NI73 299 aa18.61■□□□□ 0.57
CKS1B-203ENST00000368439 ERI2A8K979 691 aaKnown RBP18.61■□□□□ 0.57
CKS1B-203ENST00000368439 PDZK1P1A8MUH7 402 aa18.61■□□□□ 0.57
CKS1B-203ENST00000368439 AGRPO00253 132 aa18.61■□□□□ 0.57
CKS1B-203ENST00000368439 HGSO14964 777 aaPredicted RBP18.61■□□□□ 0.57
CKS1B-203ENST00000368439 IFNB1P01574 187 aa18.61■□□□□ 0.57
CKS1B-203ENST00000368439 FGGP02679 453 aa18.61■□□□□ 0.57
CKS1B-203ENST00000368439 MSH3P20585 1137 aa18.61■□□□□ 0.57
CKS1B-203ENST00000368439 MPSTP25325 297 aa18.61■□□□□ 0.57
CKS1B-203ENST00000368439 SLC5A2P31639 672 aa18.61■□□□□ 0.57
CKS1B-203ENST00000368439 FDFT1P37268 417 aa18.61■□□□□ 0.57
CKS1B-203ENST00000368439 GRIA1P42261 906 aa18.61■□□□□ 0.57
CKS1B-203ENST00000368439 SEMA5AQ13591 1074 aa18.61■□□□□ 0.57
CKS1B-203ENST00000368439 POU6F1Q14863 301 aa18.61■□□□□ 0.57
CKS1B-203ENST00000368439 CLCA4Q14CN2 919 aa18.61■□□□□ 0.57
CKS1B-203ENST00000368439 SNX20Q7Z614 316 aa18.61■□□□□ 0.57
CKS1B-203ENST00000368439 AMZ2Q86W34 360 aa18.61■□□□□ 0.57
CKS1B-203ENST00000368439 NXPE1Q8N323 547 aa18.61■□□□□ 0.57
CKS1B-203ENST00000368439 BEND7Q8N7W2 519 aaPredicted RBP18.61■□□□□ 0.57
CKS1B-203ENST00000368439 AVL9Q8NBF6 648 aa18.61■□□□□ 0.57
CKS1B-203ENST00000368439 OR52K1Q8NGK4 314 aa18.61■□□□□ 0.57
CKS1B-203ENST00000368439 OR10G6Q8NH81 332 aa18.61■□□□□ 0.57
CKS1B-203ENST00000368439 SGF29Q96ES7 293 aa18.61■□□□□ 0.57
CKS1B-203ENST00000368439 NAF1Q96HR8 494 aaKnown RBP18.61■□□□□ 0.57
CKS1B-203ENST00000368439 CMKLR1Q99788 373 aa18.61■□□□□ 0.57
CKS1B-203ENST00000368439 TBC1D10AQ9BXI6 508 aa18.61■□□□□ 0.57
CKS1B-203ENST00000368439 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.61■□□□□ 0.57
CKS1B-203ENST00000368439 FAM96AQ9H5X1 160 aa18.61■□□□□ 0.57
CKS1B-203ENST00000368439 STN1Q9H668 368 aaKnown RBP18.61■□□□□ 0.57
CKS1B-203ENST00000368439 OGFRQ9NZT2 677 aa18.61■□□□□ 0.57
CKS1B-203ENST00000368439 ACSL6Q9UKU0 697 aa18.61■□□□□ 0.57
CKS1B-203ENST00000368439 DRG1Q9Y295 367 aaKnown RBP18.61■□□□□ 0.57
CKS1B-203ENST00000368439 ZKSCAN5Q9Y2L8 839 aa18.61■□□□□ 0.57
CKS1B-203ENST00000368439 AHCTF1Q8WYP5 2266 aa18.6■□□□□ 0.57
CKS1B-203ENST00000368439 OR52A4PA6NMU1 304 aa18.6■□□□□ 0.57
CKS1B-203ENST00000368439 NVLO15381 856 aaKnown RBP18.6■□□□□ 0.57
CKS1B-203ENST00000368439 DUX1O43812 170 aa18.6■□□□□ 0.57
CKS1B-203ENST00000368439 NRDCO43847 1150 aa18.6■□□□□ 0.57
CKS1B-203ENST00000368439 JMJD7P0C870 316 aa18.6■□□□□ 0.57
CKS1B-203ENST00000368439 ZSCAN5DPP0CG00 497 aa18.6■□□□□ 0.57
CKS1B-203ENST00000368439 CCL4P13236 92 aa18.6■□□□□ 0.57
CKS1B-203ENST00000368439 VCLP18206 1134 aa18.6■□□□□ 0.57
CKS1B-203ENST00000368439 AKT1P31749 480 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms