RNA–Protein interactions for RNA: ENST00000368063.5

NCSTN-202, Transcript of nicastrin, humanhuman

TSL 1 (best) BASIC

Gene NCSTN, Length 3,031 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-202ENST00000368063 ARHGEF9O43307 516 aa13□□□□□ -0.33
NCSTN-202ENST00000368063 AKR7A2O43488 359 aa13□□□□□ -0.33
NCSTN-202ENST00000368063 B3GALNT1O75752 331 aa13□□□□□ -0.33
NCSTN-202ENST00000368063 ATP6AP2O75787 350 aa13□□□□□ -0.33
NCSTN-202ENST00000368063 FMO3P31513 532 aa13□□□□□ -0.33
NCSTN-202ENST00000368063 MTHFRP42898 656 aa13□□□□□ -0.33
NCSTN-202ENST00000368063 GNPDA1P46926 289 aa13□□□□□ -0.33
NCSTN-202ENST00000368063 CD83Q01151 205 aa13□□□□□ -0.33
NCSTN-202ENST00000368063 OLIG2Q13516 323 aa13□□□□□ -0.33
NCSTN-202ENST00000368063 PIK3R6Q5UE93 754 aa13□□□□□ -0.33
NCSTN-202ENST00000368063 SMIM5Q71RC9 77 aa13□□□□□ -0.33
NCSTN-202ENST00000368063 AMIGO3Q86WK7 504 aa13□□□□□ -0.33
NCSTN-202ENST00000368063 HTR3CQ8WXA8 447 aa13□□□□□ -0.33
NCSTN-202ENST00000368063 SLC38A4Q969I6 547 aa13□□□□□ -0.33
NCSTN-202ENST00000368063 MARC2Q969Z3 335 aa13□□□□□ -0.33
NCSTN-202ENST00000368063 GMCL1Q96IK5 515 aa13□□□□□ -0.33
NCSTN-202ENST00000368063 RHNO1Q9BSD3 238 aa13□□□□□ -0.33
NCSTN-202ENST00000368063 SNRNP25Q9BV90 132 aaKnown RBP13□□□□□ -0.33
NCSTN-202ENST00000368063 NIF3L1Q9GZT8 377 aa13□□□□□ -0.33
NCSTN-202ENST00000368063 TRMT6Q9UJA5 497 aaKnown RBP13□□□□□ -0.33
NCSTN-202ENST00000368063 PEX16Q9Y5Y5 336 aa13□□□□□ -0.33
NCSTN-202ENST00000368063 STYXL1Q9Y6J8 313 aa13□□□□□ -0.33
NCSTN-202ENST00000368063 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13□□□□□ -0.33
NCSTN-202ENST00000368063 LINC00854A0A1B0GVQ3 168 aa13□□□□□ -0.33
NCSTN-202ENST00000368063 NEMP2A6NFY4 417 aa13□□□□□ -0.33
NCSTN-202ENST00000368063 TOR1AO14656 332 aa13□□□□□ -0.33
NCSTN-202ENST00000368063 HUS1O60921 280 aa13□□□□□ -0.33
NCSTN-202ENST00000368063 TULP3O75386 442 aa13□□□□□ -0.33
NCSTN-202ENST00000368063 PGLSO95336 258 aa13□□□□□ -0.33
NCSTN-202ENST00000368063 PGK1P00558 417 aa13□□□□□ -0.33
NCSTN-202ENST00000368063 SAT1P21673 171 aa13□□□□□ -0.33
NCSTN-202ENST00000368063 KIF19Q2TAC6 998 aa13□□□□□ -0.33
NCSTN-202ENST00000368063 COQ5Q5HYK3 327 aa13□□□□□ -0.33
NCSTN-202ENST00000368063 SULT1C3Q6IMI6 304 aa13□□□□□ -0.33
NCSTN-202ENST00000368063 STYK1Q6J9G0 422 aa13□□□□□ -0.33
NCSTN-202ENST00000368063 RPS27LQ71UM5 84 aaKnown RBP13□□□□□ -0.33
NCSTN-202ENST00000368063 LINC00518Q8N0U6 118 aa13□□□□□ -0.33
NCSTN-202ENST00000368063 OR10T2Q8NGX3 314 aa13□□□□□ -0.33
NCSTN-202ENST00000368063 CCDC17Q96LX7 622 aa13□□□□□ -0.33
NCSTN-202ENST00000368063 C3orf30Q96M34 536 aa13□□□□□ -0.33
NCSTN-202ENST00000368063 FERD3LQ96RJ6 166 aa13□□□□□ -0.33
NCSTN-202ENST00000368063 UGT2B28Q9BY64 529 aa13□□□□□ -0.33
NCSTN-202ENST00000368063 PRRG3Q9BZD7 231 aa13□□□□□ -0.33
NCSTN-202ENST00000368063 KCNH7Q9NS40 1196 aa13□□□□□ -0.33
NCSTN-202ENST00000368063 SNX7Q9UNH6 387 aa13□□□□□ -0.33
NCSTN-202ENST00000368063 TRAPPC4Q9Y296 219 aa13□□□□□ -0.33
NCSTN-202ENST00000368063 SLC16A6O15403 523 aa12.99□□□□□ -0.33
NCSTN-202ENST00000368063 AIREO43918 545 aa12.99□□□□□ -0.33
NCSTN-202ENST00000368063 SUPT7LO94864 414 aa12.99□□□□□ -0.33
NCSTN-202ENST00000368063 FTH1P02794 183 aa12.99□□□□□ -0.33
NCSTN-202ENST00000368063 HOXD8P13378 290 aaPredicted RBP12.99□□□□□ -0.33
NCSTN-202ENST00000368063 HNF4AP41235 474 aa12.99□□□□□ -0.33
NCSTN-202ENST00000368063 IL18R1Q13478 541 aa12.99□□□□□ -0.33
NCSTN-202ENST00000368063 USP10Q14694 798 aaKnown RBP12.99□□□□□ -0.33
NCSTN-202ENST00000368063 PLA2G4EQ3MJ16 856 aa12.99□□□□□ -0.33
NCSTN-202ENST00000368063 MICU2Q8IYU8 434 aa12.99□□□□□ -0.33
NCSTN-202ENST00000368063 ABI1Q8IZP0 508 aa12.99□□□□□ -0.33
NCSTN-202ENST00000368063 DNAJB14Q8TBM8 379 aa12.99□□□□□ -0.33
NCSTN-202ENST00000368063 ERVK13-1Q9NX77 482 aa12.99□□□□□ -0.33
NCSTN-202ENST00000368063 MAGED2Q9UNF1 606 aaPredicted RBP12.99□□□□□ -0.33
NCSTN-202ENST00000368063 PNMA8CA0A1B0GUJ8 204 aa12.99□□□□□ -0.33
NCSTN-202ENST00000368063 INO80B-WBP1J3KQ70 363 aa12.99□□□□□ -0.33
NCSTN-202ENST00000368063 LCKP06239 509 aa12.99□□□□□ -0.33
NCSTN-202ENST00000368063 RAP2AP10114 183 aa12.99□□□□□ -0.33
NCSTN-202ENST00000368063 ZNF250P15622 560 aa12.99□□□□□ -0.33
NCSTN-202ENST00000368063 PDGFRAP16234 1089 aa12.99□□□□□ -0.33
NCSTN-202ENST00000368063 PSMB4P28070 264 aa12.99□□□□□ -0.33
NCSTN-202ENST00000368063 HTR1EP28566 365 aa12.99□□□□□ -0.33
NCSTN-202ENST00000368063 LIPAP38571 399 aa12.99□□□□□ -0.33
NCSTN-202ENST00000368063 RAP1GAPP47736 663 aa12.99□□□□□ -0.33
NCSTN-202ENST00000368063 EEFSECP57772 596 aaKnown RBP12.99□□□□□ -0.33
NCSTN-202ENST00000368063 RAPSNQ13702 412 aa12.99□□□□□ -0.33
NCSTN-202ENST00000368063 ZNF460Q14592 562 aa12.99□□□□□ -0.33
NCSTN-202ENST00000368063 BTBD16Q32M84 506 aa12.99□□□□□ -0.33
NCSTN-202ENST00000368063 MFSD14BQ5SR56 506 aa12.99□□□□□ -0.33
NCSTN-202ENST00000368063 PM20D1Q6GTS8 502 aa12.99□□□□□ -0.33
NCSTN-202ENST00000368063 KCNMB4Q86W47 210 aa12.99□□□□□ -0.33
NCSTN-202ENST00000368063 PROSER1Q86XN7 944 aa12.99□□□□□ -0.33
NCSTN-202ENST00000368063 DCP1BQ8IZD4 617 aaKnown RBP12.99□□□□□ -0.33
NCSTN-202ENST00000368063 SPATA6LQ8N4H0 392 aa12.99□□□□□ -0.33
NCSTN-202ENST00000368063 CEP19Q96LK0 163 aa12.99□□□□□ -0.33
NCSTN-202ENST00000368063 ACOX2Q99424 681 aa12.99□□□□□ -0.33
NCSTN-202ENST00000368063 RBM4BQ9BQ04 359 aaKnown RBP12.99□□□□□ -0.33
NCSTN-202ENST00000368063 MRPL57Q9BQC6 102 aaKnown RBP12.99□□□□□ -0.33
NCSTN-202ENST00000368063 RBM4Q9BWF3 364 aaKnown RBP12.99□□□□□ -0.33
NCSTN-202ENST00000368063 TMEM39AQ9NV64 488 aa12.99□□□□□ -0.33
NCSTN-202ENST00000368063 PRR12Q9ULL5 1215 aa12.99□□□□□ -0.33
NCSTN-202ENST00000368063 TPRKBQ9Y3C4 175 aa12.99□□□□□ -0.33
NCSTN-202ENST00000368063 LYVE1Q9Y5Y7 322 aa12.99□□□□□ -0.33
NCSTN-202ENST00000368063 KCNE2Q9Y6J6 123 aa12.99□□□□□ -0.33
NCSTN-202ENST00000368063 NRCAMQ92823 1304 aa12.99□□□□□ -0.33
NCSTN-202ENST00000368063 KLRG2A4D1S0 409 aaPredicted RBP12.99□□□□□ -0.33
NCSTN-202ENST00000368063 NFIBO00712 420 aa12.99□□□□□ -0.33
NCSTN-202ENST00000368063 PLD2O14939 933 aa12.99□□□□□ -0.33
NCSTN-202ENST00000368063 ATG13O75143 517 aa12.99□□□□□ -0.33
NCSTN-202ENST00000368063 CD19P15391 556 aa12.99□□□□□ -0.33
NCSTN-202ENST00000368063 CYP3A5P20815 502 aa12.99□□□□□ -0.33
NCSTN-202ENST00000368063 ATP5F1P24539 256 aaPredicted RBP12.99□□□□□ -0.33
NCSTN-202ENST00000368063 MYL6P60660 151 aa12.99□□□□□ -0.33
NCSTN-202ENST00000368063 IL5RAQ01344 420 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms