RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 NT5C3BQ969T7 300 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 ATF6BQ99941 703 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 SCML1Q9UN30 329 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 SPEF1Q9Y4P9 236 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 LSM3P62310 102 aaKnown RBP3.73□□□□□ -1.81
SYNE1-207ENST00000367255 ATP6AP1Q15904 470 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 OR8K5Q8NH50 307 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 PRCCQ92733 491 aaPredicted RBP3.73□□□□□ -1.81
SYNE1-207ENST00000367255 ZNF599Q96NL3 588 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 SLC30A2Q9BRI3 323 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 RHOJQ9H4E5 214 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 GCATO75600 419 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 SLURP2P0DP57 97 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 RPP38P78345 283 aaKnown RBP3.73□□□□□ -1.81
SYNE1-207ENST00000367255 SLC44A1Q8WWI5 657 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 DACT3Q96B18 629 aaPredicted RBP3.73□□□□□ -1.81
SYNE1-207ENST00000367255 ZNF879B4DU55 563 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 FAM47E-STBD1D6RA91 191 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 PPEF1O14829 653 aaPredicted RBP3.73□□□□□ -1.81
SYNE1-207ENST00000367255 USP12O75317 370 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 ARPP19P56211 112 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 FAM111BQ6SJ93 734 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 KLHL11Q9NVR0 708 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 EPHA6Q9UF33 1036 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 LALBAP00709 142 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 LTA4HP09960 611 aaKnown RBP3.73□□□□□ -1.81
SYNE1-207ENST00000367255 OVGP1Q12889 678 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 OGFRL1Q5TC84 451 aaPredicted RBP3.73□□□□□ -1.81
SYNE1-207ENST00000367255 KLHL24Q6TFL4 600 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 KCNT2Q6UVM3 1135 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 C6orf89Q6UWU4 347 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 CLDN22Q8N7P3 220 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 KDF1Q8NAX2 398 aaPredicted RBP3.73□□□□□ -1.81
SYNE1-207ENST00000367255 SLC2A12Q8TD20 617 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 ZNF607Q96SK3 696 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 GHRLQ9UBU3 117 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 IKZF3Q9UKT9 509 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 SSR3Q9UNL2 185 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 TOR1AO14656 332 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 PROSCO94903 275 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 GLDCP23378 1020 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 DALRD3Q5D0E6 543 aaKnown RBP3.73□□□□□ -1.81
SYNE1-207ENST00000367255 LIPMQ5VYY2 423 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 ABLIM2Q6H8Q1 611 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 IQCHQ86VS3 1027 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 TRIM49BA6NDI0 452 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 CRYABP02511 175 aaKnown RBP3.72□□□□□ -1.81
SYNE1-207ENST00000367255 CHRM3P20309 590 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 CCND2P30279 289 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 SLC25A3Q00325 362 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 ZNF283Q8N7M2 679 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 OR8S1Q8NH09 359 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 STAG3L4Q8TBR4 150 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 WRAP53Q9BUR4 548 aaKnown RBP3.72□□□□□ -1.81
SYNE1-207ENST00000367255 REEP1Q9H902 201 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 NUAK1O60285 661 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 KERAO60938 352 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 CHRNA1P02708 482 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 VSX2P58304 361 aaPredicted RBP3.72□□□□□ -1.81
SYNE1-207ENST00000367255 HIST2H3PS2Q5TEC6 136 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 EEPD1Q7L9B9 569 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 C4orf19Q8IY42 314 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 STPG2Q8N412 459 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 NXF3Q9H4D5 531 aaKnown RBP3.72□□□□□ -1.81
SYNE1-207ENST00000367255 GNEQ9Y223 722 aaKnown RBP3.72□□□□□ -1.81
SYNE1-207ENST00000367255 TULP4Q9NRJ4 1543 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 KIAA0556O60303 1618 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 UBDO15205 165 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 RPS2P15880 293 aaKnown RBP3.72□□□□□ -1.81
SYNE1-207ENST00000367255 RBP5P82980 135 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 SPESP1Q6UW49 350 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 TNS4Q8IZW8 715 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 FSTL5Q8N475 847 aaPredicted RBP3.72□□□□□ -1.81
SYNE1-207ENST00000367255 PNMA1Q8ND90 353 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 PPHLN1Q8NEY8 458 aaKnown RBP3.72□□□□□ -1.81
SYNE1-207ENST00000367255 SCPEP1Q9HB40 452 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 PHTF1Q9UMS5 762 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 POM121CA8CG34 1229 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 TAAR5O14804 337 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 G6PDP11413 515 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 DRD4P21917 467 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 POMZP3Q6PJE2 187 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 HHIPL2Q6UWX4 724 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 NT5DC3Q86UY8 548 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 PHF13Q86YI8 300 aaPredicted RBP3.72□□□□□ -1.81
SYNE1-207ENST00000367255 LRRC56Q8IYG6 542 aaPredicted RBP3.72□□□□□ -1.81
SYNE1-207ENST00000367255 NLGN1Q8N2Q7 840 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 TXNDC15Q96J42 360 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 SPATA31A5Q5VU36 1347 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 SPATA31A3Q5VYP0 1347 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 SPATA31A7Q8IWB4 1347 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 TGFB1P01137 390 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 GPAT3Q53EU6 434 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 ASRGL1Q7L266 308 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 COA1Q9GZY4 146 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 XPNPEP1Q9NQW7 623 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 PLLPQ9Y342 182 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 PCDHB1Q9Y5F3 818 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 CDC7O00311 574 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 SMIM6P0DI80 62 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms