RNA–Protein interactions for RNA: ENST00000367002.4

RD3-201, Transcript of retinal degeneration 3, GUCY2D regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RD3, Length 4,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RD3-201ENST00000367002 CNOT6Q9ULM6 557 aaKnown RBP11.36□□□□□ -0.59
RD3-201ENST00000367002 MRPS7Q9Y2R9 242 aaKnown RBP11.36□□□□□ -0.59
RD3-201ENST00000367002 H0Y858 1186 aa11.36□□□□□ -0.59
RD3-201ENST00000367002 XYLBO75191 536 aa11.36□□□□□ -0.59
RD3-201ENST00000367002 TULP3O75386 442 aa11.36□□□□□ -0.59
RD3-201ENST00000367002 CDK14O94921 469 aa11.36□□□□□ -0.59
RD3-201ENST00000367002 IL1BP01584 269 aa11.36□□□□□ -0.59
RD3-201ENST00000367002 PTGER3P43115 390 aa11.36□□□□□ -0.59
RD3-201ENST00000367002 CDH15P55291 814 aa11.36□□□□□ -0.59
RD3-201ENST00000367002 HERVK_113P63132 956 aa11.36□□□□□ -0.59
RD3-201ENST00000367002 MERTKQ12866 999 aa11.36□□□□□ -0.59
RD3-201ENST00000367002 DENND5AQ6IQ26 1287 aa11.36□□□□□ -0.59
RD3-201ENST00000367002 ATG14Q6ZNE5 492 aa11.36□□□□□ -0.59
RD3-201ENST00000367002 KCTD8Q6ZWB6 473 aa11.36□□□□□ -0.59
RD3-201ENST00000367002 AHI1Q8N157 1196 aa11.36□□□□□ -0.59
RD3-201ENST00000367002 ENDOVQ8N8Q3 282 aaKnown RBP11.36□□□□□ -0.59
RD3-201ENST00000367002 MAGEB10Q96LZ2 347 aaPredicted RBP11.36□□□□□ -0.59
RD3-201ENST00000367002 ERVK-6Q9BXR3 956 aa11.36□□□□□ -0.59
RD3-201ENST00000367002 OSBPL2Q9H1P3 480 aa11.36□□□□□ -0.59
RD3-201ENST00000367002 MIOSQ9NXC5 875 aa11.36□□□□□ -0.59
RD3-201ENST00000367002 GTF2IRD1Q9UHL9 959 aa11.36□□□□□ -0.59
RD3-201ENST00000367002 PDE10AQ9Y233 779 aa11.36□□□□□ -0.59
RD3-201ENST00000367002 ZFP37Q9Y6Q3 630 aaPredicted RBP11.36□□□□□ -0.59
RD3-201ENST00000367002 STX11O75558 287 aa11.36□□□□□ -0.59
RD3-201ENST00000367002 PDE9AO76083 593 aa11.36□□□□□ -0.59
RD3-201ENST00000367002 SCELO95171 688 aa11.36□□□□□ -0.59
RD3-201ENST00000367002 SPATA31D3P0C874 917 aa11.36□□□□□ -0.59
RD3-201ENST00000367002 NR2F6P10588 404 aa11.36□□□□□ -0.59
RD3-201ENST00000367002 MLLT6P55198 1093 aaPredicted RBP11.36□□□□□ -0.59
RD3-201ENST00000367002 SMIM11AP58511 58 aa11.36□□□□□ -0.59
RD3-201ENST00000367002 RPS24P62847 133 aaKnown RBP11.36□□□□□ -0.59
RD3-201ENST00000367002 STX4Q12846 297 aa11.36□□□□□ -0.59
RD3-201ENST00000367002 PAFAH1B3Q15102 231 aaKnown RBP11.36□□□□□ -0.59
RD3-201ENST00000367002 SFT2D3Q587I9 215 aa11.36□□□□□ -0.59
RD3-201ENST00000367002 SPATA31D4Q6ZUB0 917 aa11.36□□□□□ -0.59
RD3-201ENST00000367002 AHSA2Q719I0 299 aa11.36□□□□□ -0.59
RD3-201ENST00000367002 SERPINA9Q86WD7 417 aa11.36□□□□□ -0.59
RD3-201ENST00000367002 ZBTB2Q8N680 514 aa11.36□□□□□ -0.59
RD3-201ENST00000367002 SLC13A3Q8WWT9 602 aa11.36□□□□□ -0.59
RD3-201ENST00000367002 USP7Q93009 1102 aa11.36□□□□□ -0.59
RD3-201ENST00000367002 MRPL48Q96GC5 212 aaKnown RBP11.36□□□□□ -0.59
RD3-201ENST00000367002 CDKN2AIPNLQ96HQ2 116 aa11.36□□□□□ -0.59
RD3-201ENST00000367002 RAD18Q9NS91 495 aa11.36□□□□□ -0.59
RD3-201ENST00000367002 KIAA1522Q9P206 1035 aaPredicted RBP11.36□□□□□ -0.59
RD3-201ENST00000367002 ZNF624Q9P2J8 865 aaPredicted RBP11.36□□□□□ -0.59
RD3-201ENST00000367002 GALPQ9UBC7 116 aa11.36□□□□□ -0.59
RD3-201ENST00000367002 ZNF232Q9UNY5 417 aa11.36□□□□□ -0.59
RD3-201ENST00000367002 SLC9A8Q9Y2E8 581 aa11.36□□□□□ -0.59
RD3-201ENST00000367002 TTC24A2A3L6 582 aaPredicted RBP11.35□□□□□ -0.59
RD3-201ENST00000367002 UGT2B11O75310 529 aa11.35□□□□□ -0.59
RD3-201ENST00000367002 ALDOAP04075 364 aaKnown RBP11.35□□□□□ -0.59
RD3-201ENST00000367002 TCF3P15923 654 aa11.35□□□□□ -0.59
RD3-201ENST00000367002 SEPHS1P49903 392 aa11.35□□□□□ -0.59
RD3-201ENST00000367002 FKBP1BP68106 108 aa11.35□□□□□ -0.59
RD3-201ENST00000367002 RHDQ02161 417 aa11.35□□□□□ -0.59
RD3-201ENST00000367002 PLEKHG4Q58EX7 1191 aa11.35□□□□□ -0.59
RD3-201ENST00000367002 SH3D19Q5HYK7 790 aa11.35□□□□□ -0.59
RD3-201ENST00000367002 NOL9Q5SY16 702 aaKnown RBP11.35□□□□□ -0.59
RD3-201ENST00000367002 SERPINA13PQ6UXR4 307 aa11.35□□□□□ -0.59
RD3-201ENST00000367002 PTCHD4Q6ZW05 846 aa11.35□□□□□ -0.59
RD3-201ENST00000367002 HDDC2Q7Z4H3 204 aa11.35□□□□□ -0.59
RD3-201ENST00000367002 ANKRD23Q86SG2 305 aa11.35□□□□□ -0.59
RD3-201ENST00000367002 ZNF554Q86TJ5 538 aa11.35□□□□□ -0.59
RD3-201ENST00000367002 CACTIN-AS1Q8N1I8 211 aa11.35□□□□□ -0.59
RD3-201ENST00000367002 NUSAP1Q9BXS6 441 aaKnown RBP11.35□□□□□ -0.59
RD3-201ENST00000367002 NFKBIZQ9BYH8 718 aa11.35□□□□□ -0.59
RD3-201ENST00000367002 TFB2MQ9H5Q4 396 aaKnown RBP11.35□□□□□ -0.59
RD3-201ENST00000367002 SGK2Q9HBY8 427 aa11.35□□□□□ -0.59
RD3-201ENST00000367002 IFT80Q9P2H3 777 aaPredicted RBP11.35□□□□□ -0.59
RD3-201ENST00000367002 TRIM17Q9Y577 477 aa11.35□□□□□ -0.59
RD3-201ENST00000367002 SDK1Q7Z5N4 2213 aa11.35□□□□□ -0.59
RD3-201ENST00000367002 NIPSNAP2O75323 286 aa11.35□□□□□ -0.59
RD3-201ENST00000367002 RGS20O76081 388 aa11.35□□□□□ -0.59
RD3-201ENST00000367002 FGF3P11487 239 aaPredicted RBP11.35□□□□□ -0.59
RD3-201ENST00000367002 SPAM1P38567 509 aa11.35□□□□□ -0.59
RD3-201ENST00000367002 SLC26A3P40879 764 aa11.35□□□□□ -0.59
RD3-201ENST00000367002 CDH4P55283 916 aa11.35□□□□□ -0.59
RD3-201ENST00000367002 SP3Q02447 781 aa11.35□□□□□ -0.59
RD3-201ENST00000367002 COX10Q12887 443 aa11.35□□□□□ -0.59
RD3-201ENST00000367002 TAB1Q15750 504 aa11.35□□□□□ -0.59
RD3-201ENST00000367002 NEK10Q6ZWH5 1172 aa11.35□□□□□ -0.59
RD3-201ENST00000367002 ZNF513Q8N8E2 541 aaPredicted RBP11.35□□□□□ -0.59
RD3-201ENST00000367002 KCTD13Q8WZ19 329 aa11.35□□□□□ -0.59
RD3-201ENST00000367002 LRRC3Q9BY71 257 aa11.35□□□□□ -0.59
RD3-201ENST00000367002 SLC9A3R1O14745 358 aaPredicted RBP11.35□□□□□ -0.59
RD3-201ENST00000367002 SERPINB7O75635 380 aa11.35□□□□□ -0.59
RD3-201ENST00000367002 STBD1O95210 358 aa11.35□□□□□ -0.59
RD3-201ENST00000367002 BMP10O95393 424 aa11.35□□□□□ -0.59
RD3-201ENST00000367002 ELNP15502 786 aa11.35□□□□□ -0.59
RD3-201ENST00000367002 CHIT1Q13231 466 aa11.35□□□□□ -0.59
RD3-201ENST00000367002 TCEA2Q15560 299 aa11.35□□□□□ -0.59
RD3-201ENST00000367002 RPS27LQ71UM5 84 aaKnown RBP11.35□□□□□ -0.59
RD3-201ENST00000367002 TMPRSS11BQ86T26 416 aa11.35□□□□□ -0.59
RD3-201ENST00000367002 SLC34A3Q8N130 599 aa11.35□□□□□ -0.59
RD3-201ENST00000367002 PIK3C3Q8NEB9 887 aa11.35□□□□□ -0.59
RD3-201ENST00000367002 LRRC58Q96CX6 371 aa11.35□□□□□ -0.59
RD3-201ENST00000367002 PCYT2Q99447 389 aa11.35□□□□□ -0.59
RD3-201ENST00000367002 FEM1AQ9BSK4 669 aa11.35□□□□□ -0.59
RD3-201ENST00000367002 ZBTB26Q9HCK0 441 aa11.35□□□□□ -0.59
RD3-201ENST00000367002 SUCOQ9UBS9 1254 aaKnown RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms