RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 ASMTLO95671 621 aa11.16□□□□□ -0.62
CSNK1E-202ENST00000366216 MT-CO1P00395 513 aa11.16□□□□□ -0.62
CSNK1E-202ENST00000366216 PRLP01236 227 aa11.16□□□□□ -0.62
CSNK1E-202ENST00000366216 ITGA2BP08514 1039 aa11.16□□□□□ -0.62
CSNK1E-202ENST00000366216 GIMD1P0DJR0 217 aa11.16□□□□□ -0.62
CSNK1E-202ENST00000366216 PABPC1P11940 636 aaKnown RBP11.16□□□□□ -0.62
CSNK1E-202ENST00000366216 CKMT1AP12532 417 aa11.16□□□□□ -0.62
CSNK1E-202ENST00000366216 PSMA3P25788 255 aa11.16□□□□□ -0.62
CSNK1E-202ENST00000366216 ARNTP27540 789 aa11.16□□□□□ -0.62
CSNK1E-202ENST00000366216 SPRP35270 261 aaPredicted RBP11.16□□□□□ -0.62
CSNK1E-202ENST00000366216 HADHAP40939 763 aa11.16□□□□□ -0.62
CSNK1E-202ENST00000366216 POLD2P49005 469 aa11.16□□□□□ -0.62
CSNK1E-202ENST00000366216 NUMBP49757 651 aa11.16□□□□□ -0.62
CSNK1E-202ENST00000366216 NEK3P51956 506 aa11.16□□□□□ -0.62
CSNK1E-202ENST00000366216 LIMK2P53671 638 aa11.16□□□□□ -0.62
CSNK1E-202ENST00000366216 PPP2CBP62714 309 aa11.16□□□□□ -0.62
CSNK1E-202ENST00000366216 PPP2CAP67775 309 aa11.16□□□□□ -0.62
CSNK1E-202ENST00000366216 ACVR1Q04771 509 aa11.16□□□□□ -0.62
CSNK1E-202ENST00000366216 SFSWAPQ12872 951 aaKnown RBP11.16□□□□□ -0.62
CSNK1E-202ENST00000366216 ILF2Q12905 390 aaKnown RBP11.16□□□□□ -0.62
CSNK1E-202ENST00000366216 CLN3Q13286 438 aa11.16□□□□□ -0.62
CSNK1E-202ENST00000366216 SEPT6Q14141 434 aa11.16□□□□□ -0.62
CSNK1E-202ENST00000366216 CNGA3Q16281 694 aa11.16□□□□□ -0.62
CSNK1E-202ENST00000366216 UGP2Q16851 508 aa11.16□□□□□ -0.62
CSNK1E-202ENST00000366216 C4orf17Q53FE4 359 aa11.16□□□□□ -0.62
CSNK1E-202ENST00000366216 C3orf38Q5JPI3 329 aa11.16□□□□□ -0.62
CSNK1E-202ENST00000366216 MROH9Q5TGP6 573 aa11.16□□□□□ -0.62
CSNK1E-202ENST00000366216 STRA8Q7Z7C7 330 aa11.16□□□□□ -0.62
CSNK1E-202ENST00000366216 SRLQ86TD4 932 aa11.16□□□□□ -0.62
CSNK1E-202ENST00000366216 LMNTD2Q8IXW0 634 aa11.16□□□□□ -0.62
CSNK1E-202ENST00000366216 ANKRD42Q8N9B4 389 aa11.16□□□□□ -0.62
CSNK1E-202ENST00000366216 MFSD2AQ8NA29 543 aa11.16□□□□□ -0.62
CSNK1E-202ENST00000366216 CALML6Q8TD86 181 aa11.16□□□□□ -0.62
CSNK1E-202ENST00000366216 STYXQ8WUJ0 223 aa11.16□□□□□ -0.62
CSNK1E-202ENST00000366216 CKAP2Q8WWK9 683 aa11.16□□□□□ -0.62
CSNK1E-202ENST00000366216 APOPT1Q96IL0 206 aa11.16□□□□□ -0.62
CSNK1E-202ENST00000366216 EXOC2Q96KP1 924 aa11.16□□□□□ -0.62
CSNK1E-202ENST00000366216 CCNL2Q96S94 520 aaPredicted RBP11.16□□□□□ -0.62
CSNK1E-202ENST00000366216 OMDQ99983 421 aa11.16□□□□□ -0.62
CSNK1E-202ENST00000366216 ARHGAP9Q9BRR9 750 aa11.16□□□□□ -0.62
CSNK1E-202ENST00000366216 FAM167BQ9BTA0 163 aa11.16□□□□□ -0.62
CSNK1E-202ENST00000366216 ADGRE3Q9BY15 652 aa11.16□□□□□ -0.62
CSNK1E-202ENST00000366216 CEP44Q9C0F1 390 aa11.16□□□□□ -0.62
CSNK1E-202ENST00000366216 IARS2Q9NSE4 1012 aaKnown RBP11.16□□□□□ -0.62
CSNK1E-202ENST00000366216 SUN2Q9UH99 717 aa11.16□□□□□ -0.62
CSNK1E-202ENST00000366216 GGA2Q9UJY4 613 aa11.16□□□□□ -0.62
CSNK1E-202ENST00000366216 FZD4Q9ULV1 537 aa11.16□□□□□ -0.62
CSNK1E-202ENST00000366216 HS3ST2Q9Y278 367 aa11.16□□□□□ -0.62
CSNK1E-202ENST00000366216 FCF1Q9Y324 198 aaKnown RBP11.16□□□□□ -0.62
CSNK1E-202ENST00000366216 PSAT1Q9Y617 370 aa11.16□□□□□ -0.62
CSNK1E-202ENST00000366216 LY6G6EA0A0G2JKS1 128 aa11.15□□□□□ -0.62
CSNK1E-202ENST00000366216 CDRT15L2A8MXV6 281 aa11.15□□□□□ -0.62
CSNK1E-202ENST00000366216 MID1O15344 667 aa11.15□□□□□ -0.62
CSNK1E-202ENST00000366216 EFSO43281 561 aa11.15□□□□□ -0.62
CSNK1E-202ENST00000366216 FZD6O60353 706 aa11.15□□□□□ -0.62
CSNK1E-202ENST00000366216 RNASEH2AO75792 299 aaKnown RBP11.15□□□□□ -0.62
CSNK1E-202ENST00000366216 VAPBO95292 243 aa11.15□□□□□ -0.62
CSNK1E-202ENST00000366216 CRTAMO95727 393 aa11.15□□□□□ -0.62
CSNK1E-202ENST00000366216 IGSF6O95976 241 aa11.15□□□□□ -0.62
CSNK1E-202ENST00000366216 ATP5BP06576 529 aaKnown RBP11.15□□□□□ -0.62
CSNK1E-202ENST00000366216 GP1BAP07359 652 aa11.15□□□□□ -0.62
CSNK1E-202ENST00000366216 DLDP09622 509 aaKnown RBP11.15□□□□□ -0.62
CSNK1E-202ENST00000366216 SFTPCP11686 197 aa11.15□□□□□ -0.62
CSNK1E-202ENST00000366216 ITGB6P18564 788 aa11.15□□□□□ -0.62
CSNK1E-202ENST00000366216 RPA3P35244 121 aaPredicted RBP11.15□□□□□ -0.62
CSNK1E-202ENST00000366216 MAGEA12P43365 314 aa11.15□□□□□ -0.62
CSNK1E-202ENST00000366216 METAP1P53582 386 aa11.15□□□□□ -0.62
CSNK1E-202ENST00000366216 WDR4P57081 412 aaKnown RBP11.15□□□□□ -0.62
CSNK1E-202ENST00000366216 RPL26P61254 145 aaKnown RBP11.15□□□□□ -0.62
CSNK1E-202ENST00000366216 TLE1Q04724 770 aa11.15□□□□□ -0.62
CSNK1E-202ENST00000366216 TRAF2Q12933 501 aa11.15□□□□□ -0.62
CSNK1E-202ENST00000366216 THOC5Q13769 683 aaKnown RBP11.15□□□□□ -0.62
CSNK1E-202ENST00000366216 BMPR2Q13873 1038 aa11.15□□□□□ -0.62
CSNK1E-202ENST00000366216 GALNT3Q14435 633 aa11.15□□□□□ -0.62
CSNK1E-202ENST00000366216 CST6Q15828 149 aa11.15□□□□□ -0.62
CSNK1E-202ENST00000366216 KIAA0408Q6ZU52 694 aa11.15□□□□□ -0.62
CSNK1E-202ENST00000366216 GALNT7Q86SF2 657 aa11.15□□□□□ -0.62
CSNK1E-202ENST00000366216 AHI1Q8N157 1196 aa11.15□□□□□ -0.62
CSNK1E-202ENST00000366216 SLC25A45Q8N413 288 aa11.15□□□□□ -0.62
CSNK1E-202ENST00000366216 AADATQ8N5Z0 425 aa11.15□□□□□ -0.62
CSNK1E-202ENST00000366216 OR13J1Q8NGT2 312 aa11.15□□□□□ -0.62
CSNK1E-202ENST00000366216 OR4C6Q8NH72 309 aa11.15□□□□□ -0.62
CSNK1E-202ENST00000366216 MGARPQ8TDB4 240 aa11.15□□□□□ -0.62
CSNK1E-202ENST00000366216 DYDC1Q8WWB3 177 aa11.15□□□□□ -0.62
CSNK1E-202ENST00000366216 MRGPRX3Q96LB0 322 aa11.15□□□□□ -0.62
CSNK1E-202ENST00000366216 ZNF317Q96PQ6 595 aaPredicted RBP11.15□□□□□ -0.62
CSNK1E-202ENST00000366216 AGAP2Q99490 1192 aa11.15□□□□□ -0.62
CSNK1E-202ENST00000366216 ABCG4Q9H172 646 aa11.15□□□□□ -0.62
CSNK1E-202ENST00000366216 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.15□□□□□ -0.62
CSNK1E-202ENST00000366216 IL1RAPL1Q9NZN1 696 aa11.15□□□□□ -0.62
CSNK1E-202ENST00000366216 HACD3Q9P035 362 aa11.15□□□□□ -0.62
CSNK1E-202ENST00000366216 SLC17A6Q9P2U8 582 aa11.15□□□□□ -0.62
CSNK1E-202ENST00000366216 SLC2A6Q9UGQ3 507 aa11.15□□□□□ -0.62
CSNK1E-202ENST00000366216 SLC25A13Q9UJS0 675 aa11.15□□□□□ -0.62
CSNK1E-202ENST00000366216 RPL26L1Q9UNX3 145 aaKnown RBP11.15□□□□□ -0.62
CSNK1E-202ENST00000366216 CHKBQ9Y259 395 aa11.15□□□□□ -0.62
CSNK1E-202ENST00000366216 CA5BQ9Y2D0 317 aa11.15□□□□□ -0.62
CSNK1E-202ENST00000366216 U3KQA8 63 aa11.15□□□□□ -0.62
CSNK1E-202ENST00000366216 ANKRD66B4E2M5 251 aa11.14□□□□□ -0.63
CSNK1E-202ENST00000366216 GOLGA8RI6L899 631 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms