RNA–Protein interactions for RNA: ENST00000365559.1

RNU4-48P-201, Transcript of RNA, U4 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU4-48P, Length 182 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-48P-201ENST00000365559 TMEM8BA6NDV4 472 aa3.03□□□□□ -1.92
RNU4-48P-201ENST00000365559 ANKRD66B4E2M5 251 aa3.03□□□□□ -1.92
RNU4-48P-201ENST00000365559 TMEM189-UBE2V1I3L0A0 370 aa3.03□□□□□ -1.92
RNU4-48P-201ENST00000365559 J3QR06 171 aa3.03□□□□□ -1.92
RNU4-48P-201ENST00000365559 ZBTB43O43298 467 aa3.03□□□□□ -1.92
RNU4-48P-201ENST00000365559 HS6ST1O60243 411 aa3.03□□□□□ -1.92
RNU4-48P-201ENST00000365559 DOK2O60496 412 aa3.03□□□□□ -1.92
RNU4-48P-201ENST00000365559 SOCS5O75159 536 aa3.03□□□□□ -1.92
RNU4-48P-201ENST00000365559 BAG4O95429 457 aaKnown RBP3.03□□□□□ -1.92
RNU4-48P-201ENST00000365559 RB1P06400 928 aa3.03□□□□□ -1.92
RNU4-48P-201ENST00000365559 CFC1BP0CG36 223 aa3.03□□□□□ -1.92
RNU4-48P-201ENST00000365559 CFC1P0CG37 223 aa3.03□□□□□ -1.92
RNU4-48P-201ENST00000365559 FGF5P12034 268 aa3.03□□□□□ -1.92
RNU4-48P-201ENST00000365559 ACTN1P12814 892 aa3.03□□□□□ -1.92
RNU4-48P-201ENST00000365559 CSF2RAP15509 400 aa3.03□□□□□ -1.92
RNU4-48P-201ENST00000365559 ANOS1P23352 680 aa3.03□□□□□ -1.92
RNU4-48P-201ENST00000365559 NR2F2P24468 414 aa3.03□□□□□ -1.92
RNU4-48P-201ENST00000365559 CTSCP53634 463 aa3.03□□□□□ -1.92
RNU4-48P-201ENST00000365559 GEMIN4P57678 1058 aaKnown RBP3.03□□□□□ -1.92
RNU4-48P-201ENST00000365559 ARF3P61204 181 aaPredicted RBP3.03□□□□□ -1.92
RNU4-48P-201ENST00000365559 ARF1P84077 181 aaKnown RBP3.03□□□□□ -1.92
RNU4-48P-201ENST00000365559 UBE2V1Q13404 147 aa3.03□□□□□ -1.92
RNU4-48P-201ENST00000365559 ACVR2BQ13705 512 aa3.03□□□□□ -1.92
RNU4-48P-201ENST00000365559 RARS2Q5T160 578 aaKnown RBP3.03□□□□□ -1.92
RNU4-48P-201ENST00000365559 ZNF449Q6P9G9 518 aa3.03□□□□□ -1.92
RNU4-48P-201ENST00000365559 ZNF534Q76KX8 674 aa3.03□□□□□ -1.92
RNU4-48P-201ENST00000365559 KLHDC8BQ8IXV7 354 aa3.03□□□□□ -1.92
RNU4-48P-201ENST00000365559 TEX11Q8IYF3 940 aa3.03□□□□□ -1.92
RNU4-48P-201ENST00000365559 C1orf52Q8N6N3 182 aaKnown RBP3.03□□□□□ -1.92
RNU4-48P-201ENST00000365559 KLHDC9Q8NEP7 349 aa3.03□□□□□ -1.92
RNU4-48P-201ENST00000365559 NUDCD1Q96RS6 583 aa3.03□□□□□ -1.92
RNU4-48P-201ENST00000365559 RAD21L1Q9H4I0 556 aa3.03□□□□□ -1.92
RNU4-48P-201ENST00000365559 TFB2MQ9H5Q4 396 aaKnown RBP3.03□□□□□ -1.92
RNU4-48P-201ENST00000365559 MBNL1Q9NR56 388 aaKnown RBP3.03□□□□□ -1.92
RNU4-48P-201ENST00000365559 TRMT1Q9NXH9 659 aaKnown RBP3.03□□□□□ -1.92
RNU4-48P-201ENST00000365559 RCC2Q9P258 522 aaKnown RBP3.03□□□□□ -1.92
RNU4-48P-201ENST00000365559 DBNLQ9UJU6 430 aaKnown RBP3.03□□□□□ -1.92
RNU4-48P-201ENST00000365559 NENFQ9UMX5 172 aa3.03□□□□□ -1.92
RNU4-48P-201ENST00000365559 ITIH6Q6UXX5 1313 aa3.02□□□□□ -1.93
RNU4-48P-201ENST00000365559 A0A0G2JNG1 304 aa3.02□□□□□ -1.93
RNU4-48P-201ENST00000365559 A0A1W2PR77 199 aa3.02□□□□□ -1.93
RNU4-48P-201ENST00000365559 OR2M5A3KFT3 312 aa3.02□□□□□ -1.93
RNU4-48P-201ENST00000365559 PTGES3LE9PB15 166 aa3.02□□□□□ -1.93
RNU4-48P-201ENST00000365559 PLK4O00444 970 aa3.02□□□□□ -1.93
RNU4-48P-201ENST00000365559 AP3D1O14617 1153 aa3.02□□□□□ -1.93
RNU4-48P-201ENST00000365559 SYNCRIPO60506 623 aaKnown RBP3.02□□□□□ -1.93
RNU4-48P-201ENST00000365559 WDHD1O75717 1129 aaPredicted RBP3.02□□□□□ -1.93
RNU4-48P-201ENST00000365559 AMBPP02760 352 aa3.02□□□□□ -1.93
RNU4-48P-201ENST00000365559 TFAP2AP05549 437 aa3.02□□□□□ -1.93
RNU4-48P-201ENST00000365559 KRT19P08727 400 aa3.02□□□□□ -1.93
RNU4-48P-201ENST00000365559 PAX1P15863 534 aa3.02□□□□□ -1.93
RNU4-48P-201ENST00000365559 ZNF23P17027 643 aa3.02□□□□□ -1.93
RNU4-48P-201ENST00000365559 MCCP23508 829 aa3.02□□□□□ -1.93
RNU4-48P-201ENST00000365559 PON1P27169 355 aa3.02□□□□□ -1.93
RNU4-48P-201ENST00000365559 HOXA13P31271 388 aaPredicted RBP3.02□□□□□ -1.93
RNU4-48P-201ENST00000365559 DCTP40126 519 aa3.02□□□□□ -1.93
RNU4-48P-201ENST00000365559 GLIPR1P48060 266 aa3.02□□□□□ -1.93
RNU4-48P-201ENST00000365559 MLLT10P55197 1068 aa3.02□□□□□ -1.93
RNU4-48P-201ENST00000365559 PPP2R2BQ00005 443 aa3.02□□□□□ -1.93
RNU4-48P-201ENST00000365559 MBTD1Q05BQ5 628 aa3.02□□□□□ -1.93
RNU4-48P-201ENST00000365559 SIM2Q14190 667 aaPredicted RBP3.02□□□□□ -1.93
RNU4-48P-201ENST00000365559 RBM39Q14498 530 aaKnown RBP3.02□□□□□ -1.93
RNU4-48P-201ENST00000365559 IRF3Q14653 427 aa3.02□□□□□ -1.93
RNU4-48P-201ENST00000365559 KIR2DS5Q14953 304 aa3.02□□□□□ -1.93
RNU4-48P-201ENST00000365559 MEP1AQ16819 746 aa3.02□□□□□ -1.93
RNU4-48P-201ENST00000365559 TPRG1Q6ZUI0 275 aa3.02□□□□□ -1.93
RNU4-48P-201ENST00000365559 ANO5Q75V66 913 aa3.02□□□□□ -1.93
RNU4-48P-201ENST00000365559 GALNT13Q8IUC8 556 aa3.02□□□□□ -1.93
RNU4-48P-201ENST00000365559 SCYL3Q8IZE3 742 aa3.02□□□□□ -1.93
RNU4-48P-201ENST00000365559 ADGRF2Q8IZF7 708 aa3.02□□□□□ -1.93
RNU4-48P-201ENST00000365559 PPP4R1Q8TF05 950 aa3.02□□□□□ -1.93
RNU4-48P-201ENST00000365559 SCRN2Q96FV2 425 aa3.02□□□□□ -1.93
RNU4-48P-201ENST00000365559 PGAM5Q96HS1 289 aa3.02□□□□□ -1.93
RNU4-48P-201ENST00000365559 ABHD8Q96I13 439 aa3.02□□□□□ -1.93
RNU4-48P-201ENST00000365559 ZNF354BQ96LW1 612 aa3.02□□□□□ -1.93
RNU4-48P-201ENST00000365559 C17orf77Q96MU5 243 aa3.02□□□□□ -1.93
RNU4-48P-201ENST00000365559 SLX1AQ9BQ83 275 aa3.02□□□□□ -1.93
RNU4-48P-201ENST00000365559 SEMA6AQ9H2E6 1030 aa3.02□□□□□ -1.93
RNU4-48P-201ENST00000365559 UPF2Q9HAU5 1272 aaKnown RBP3.02□□□□□ -1.93
RNU4-48P-201ENST00000365559 FAM118AQ9NWS6 357 aa3.02□□□□□ -1.93
RNU4-48P-201ENST00000365559 MAP3K20Q9NYL2 800 aaKnown RBP3.02□□□□□ -1.93
RNU4-48P-201ENST00000365559 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.02□□□□□ -1.93
RNU4-48P-201ENST00000365559 YIPF1Q9Y548 306 aa3.02□□□□□ -1.93
RNU4-48P-201ENST00000365559 A0A1W2PPI3 338 aa3.01□□□□□ -1.93
RNU4-48P-201ENST00000365559 CDRT15L2A8MXV6 281 aa3.01□□□□□ -1.93
RNU4-48P-201ENST00000365559 BUD23O43709 281 aaKnown RBP3.01□□□□□ -1.93
RNU4-48P-201ENST00000365559 SH3BP5O60239 455 aa3.01□□□□□ -1.93
RNU4-48P-201ENST00000365559 PRKNO60260 465 aaPredicted RBP3.01□□□□□ -1.93
RNU4-48P-201ENST00000365559 TMCC2O75069 709 aa3.01□□□□□ -1.93
RNU4-48P-201ENST00000365559 ZBED4O75132 1171 aa3.01□□□□□ -1.93
RNU4-48P-201ENST00000365559 PDE9AO76083 593 aa3.01□□□□□ -1.93
RNU4-48P-201ENST00000365559 BMP10O95393 424 aa3.01□□□□□ -1.93
RNU4-48P-201ENST00000365559 GCNT3O95395 438 aa3.01□□□□□ -1.93
RNU4-48P-201ENST00000365559 LIPFP07098 398 aa3.01□□□□□ -1.93
RNU4-48P-201ENST00000365559 PRSS1P07477 247 aa3.01□□□□□ -1.93
RNU4-48P-201ENST00000365559 MMP15P51511 669 aa3.01□□□□□ -1.93
RNU4-48P-201ENST00000365559 SUOXP51687 545 aa3.01□□□□□ -1.93
RNU4-48P-201ENST00000365559 KRTAP10-6P60371 365 aaPredicted RBP3.01□□□□□ -1.93
RNU4-48P-201ENST00000365559 KIR2DS3Q14952 304 aa3.01□□□□□ -1.93
RNU4-48P-201ENST00000365559 DLG2Q15700 870 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms