RNA–Protein interactions for RNA: ENST00000361575.3

RPL39-201, Transcript of ribosomal protein L39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL39, Length 401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-201ENST00000361575 PRAMEF11O60813 436 aa4.82□□□□□ -1.64
RPL39-201ENST00000361575 DANCRP0C864 163 aa4.82□□□□□ -1.64
RPL39-201ENST00000361575 TGFB3P10600 412 aa4.82□□□□□ -1.64
RPL39-201ENST00000361575 GJA1P17302 382 aa4.82□□□□□ -1.64
RPL39-201ENST00000361575 KCNA5P22460 613 aa4.82□□□□□ -1.64
RPL39-201ENST00000361575 TKTP29401 623 aaKnown RBP4.82□□□□□ -1.64
RPL39-201ENST00000361575 PRKCIP41743 596 aa4.82□□□□□ -1.64
RPL39-201ENST00000361575 NUDT6P53370 316 aa4.82□□□□□ -1.64
RPL39-201ENST00000361575 SEC61BP60468 96 aaKnown RBP4.82□□□□□ -1.64
RPL39-201ENST00000361575 PLIN5Q00G26 463 aa4.82□□□□□ -1.64
RPL39-201ENST00000361575 RBPJQ06330 500 aa4.82□□□□□ -1.64
RPL39-201ENST00000361575 RUNX1T1Q06455 604 aa4.82□□□□□ -1.64
RPL39-201ENST00000361575 SRSF4Q08170 494 aaKnown RBP4.82□□□□□ -1.64
RPL39-201ENST00000361575 CRYZQ08257 329 aaKnown RBP4.82□□□□□ -1.64
RPL39-201ENST00000361575 KLF9Q13886 244 aaPredicted RBP4.82□□□□□ -1.64
RPL39-201ENST00000361575 NFE2L1Q14494 772 aa4.82□□□□□ -1.64
RPL39-201ENST00000361575 CTF1Q16619 201 aa4.82□□□□□ -1.64
RPL39-201ENST00000361575 SMN1Q16637 294 aaKnown RBP4.82□□□□□ -1.64
RPL39-201ENST00000361575 MTX3Q5HYI7 312 aa4.82□□□□□ -1.64
RPL39-201ENST00000361575 KCNT1Q5JUK3 1230 aa4.82□□□□□ -1.64
RPL39-201ENST00000361575 FNBP1LQ5T0N5 605 aa4.82□□□□□ -1.64
RPL39-201ENST00000361575 PLBD1Q6P4A8 553 aa4.82□□□□□ -1.64
RPL39-201ENST00000361575 FAM198BQ6UWH4 519 aa4.82□□□□□ -1.64
RPL39-201ENST00000361575 PET117Q6UWS5 81 aa4.82□□□□□ -1.64
RPL39-201ENST00000361575 Q75L30 129 aa4.82□□□□□ -1.64
RPL39-201ENST00000361575 PM20D2Q8IYS1 436 aa4.82□□□□□ -1.64
RPL39-201ENST00000361575 GCSAMQ8N6F7 178 aa4.82□□□□□ -1.64
RPL39-201ENST00000361575 EMC1Q8N766 993 aa4.82□□□□□ -1.64
RPL39-201ENST00000361575 OR2AJ1Q8NGZ0 328 aa4.82□□□□□ -1.64
RPL39-201ENST00000361575 GDAP1Q8TB36 358 aa4.82□□□□□ -1.64
RPL39-201ENST00000361575 CORO2AQ92828 525 aa4.82□□□□□ -1.64
RPL39-201ENST00000361575 ZNF558Q96NG5 402 aa4.82□□□□□ -1.64
RPL39-201ENST00000361575 LRRC3BQ96PB8 259 aa4.82□□□□□ -1.64
RPL39-201ENST00000361575 MS4A10Q96PG2 267 aa4.82□□□□□ -1.64
RPL39-201ENST00000361575 SPAG5Q96R06 1193 aa4.82□□□□□ -1.64
RPL39-201ENST00000361575 INTS14Q96SY0 518 aa4.82□□□□□ -1.64
RPL39-201ENST00000361575 SEMA3CQ99985 751 aa4.82□□□□□ -1.64
RPL39-201ENST00000361575 PIH1D3Q9NQM4 214 aaKnown RBP4.82□□□□□ -1.64
RPL39-201ENST00000361575 MCM9Q9NXL9 1143 aa4.82□□□□□ -1.64
RPL39-201ENST00000361575 RCC2Q9P258 522 aaKnown RBP4.82□□□□□ -1.64
RPL39-201ENST00000361575 IL36RNQ9UBH0 155 aa4.82□□□□□ -1.64
RPL39-201ENST00000361575 FRMD4BQ9Y2L6 1034 aa4.82□□□□□ -1.64
RPL39-201ENST00000361575 INSL5Q9Y5Q6 135 aa4.82□□□□□ -1.64
RPL39-201ENST00000361575 TTC3P53804 2025 aa4.81□□□□□ -1.64
RPL39-201ENST00000361575 hDV102S1A0JD36 115 aa4.81□□□□□ -1.64
RPL39-201ENST00000361575 A4D1N5 150 aa4.81□□□□□ -1.64
RPL39-201ENST00000361575 ENO4A6NNW6 628 aa4.81□□□□□ -1.64
RPL39-201ENST00000361575 H0YAE9 185 aa4.81□□□□□ -1.64
RPL39-201ENST00000361575 PSMD14O00487 310 aa4.81□□□□□ -1.64
RPL39-201ENST00000361575 VWA5AO00534 786 aa4.81□□□□□ -1.64
RPL39-201ENST00000361575 OR10H2O60403 315 aa4.81□□□□□ -1.64
RPL39-201ENST00000361575 SYNCRIPO60506 623 aaKnown RBP4.81□□□□□ -1.64
RPL39-201ENST00000361575 SIX3O95343 332 aaPredicted RBP4.81□□□□□ -1.64
RPL39-201ENST00000361575 SLU7O95391 586 aaKnown RBP4.81□□□□□ -1.64
RPL39-201ENST00000361575 CH25HO95992 272 aa4.81□□□□□ -1.64
RPL39-201ENST00000361575 ZFYP08048 801 aaPredicted RBP4.81□□□□□ -1.64
RPL39-201ENST00000361575 ATP5DP30049 168 aa4.81□□□□□ -1.64
RPL39-201ENST00000361575 SSTR2P30874 369 aa4.81□□□□□ -1.64
RPL39-201ENST00000361575 MATR3P43243 847 aaKnown RBP eCLIP4.81□□□□□ -1.64
RPL39-201ENST00000361575 RFX2P48378 723 aa4.81□□□□□ -1.64
RPL39-201ENST00000361575 ENTPD1P49961 510 aa4.81□□□□□ -1.64
RPL39-201ENST00000361575 CDK3Q00526 305 aa4.81□□□□□ -1.64
RPL39-201ENST00000361575 BNC1Q01954 994 aa4.81□□□□□ -1.64
RPL39-201ENST00000361575 PPATQ06203 517 aa4.81□□□□□ -1.64
RPL39-201ENST00000361575 C17orf67Q0P5P2 114 aa4.81□□□□□ -1.64
RPL39-201ENST00000361575 PTPRCAPQ14761 206 aa4.81□□□□□ -1.64
RPL39-201ENST00000361575 PRTGQ2VWP7 1150 aa4.81□□□□□ -1.64
RPL39-201ENST00000361575 FSCBQ5H9T9 825 aa4.81□□□□□ -1.64
RPL39-201ENST00000361575 DNTTIP2Q5QJE6 756 aaKnown RBP4.81□□□□□ -1.64
RPL39-201ENST00000361575 PLA2G4FQ68DD2 849 aa4.81□□□□□ -1.64
RPL39-201ENST00000361575 TYW3Q6IPR3 259 aaKnown RBP4.81□□□□□ -1.64
RPL39-201ENST00000361575 WDR73Q6P4I2 378 aa4.81□□□□□ -1.64
RPL39-201ENST00000361575 TMEM173Q86WV6 379 aaPredicted RBP4.81□□□□□ -1.64
RPL39-201ENST00000361575 ZNF34Q8IZ26 560 aa4.81□□□□□ -1.64
RPL39-201ENST00000361575 MAML2Q8IZL2 1156 aaPredicted RBP4.81□□□□□ -1.64
RPL39-201ENST00000361575 NANOGP1Q8N7R0 232 aa4.81□□□□□ -1.64
RPL39-201ENST00000361575 NRACQ8N912 160 aa4.81□□□□□ -1.64
RPL39-201ENST00000361575 NAT8LQ8N9F0 302 aa4.81□□□□□ -1.64
RPL39-201ENST00000361575 IQUBQ8NA54 791 aa4.81□□□□□ -1.64
RPL39-201ENST00000361575 SLC4A11Q8NBS3 891 aa4.81□□□□□ -1.64
RPL39-201ENST00000361575 SPATA22Q8NHS9 363 aa4.81□□□□□ -1.64
RPL39-201ENST00000361575 SETD6Q8TBK2 473 aa4.81□□□□□ -1.64
RPL39-201ENST00000361575 PRMT6Q96LA8 375 aaPredicted RBP4.81□□□□□ -1.64
RPL39-201ENST00000361575 NLRP4Q96MN2 994 aa4.81□□□□□ -1.64
RPL39-201ENST00000361575 OR6C1Q96RD1 312 aa4.81□□□□□ -1.64
RPL39-201ENST00000361575 CSF3RQ99062 836 aa4.81□□□□□ -1.64
RPL39-201ENST00000361575 FZD8Q9H461 694 aa4.81□□□□□ -1.64
RPL39-201ENST00000361575 SLA2Q9H6Q3 261 aa4.81□□□□□ -1.64
RPL39-201ENST00000361575 TBC1D17Q9HA65 648 aa4.81□□□□□ -1.64
RPL39-201ENST00000361575 NRIP3Q9NQ35 241 aa4.81□□□□□ -1.64
RPL39-201ENST00000361575 PFDN4Q9NQP4 134 aa4.81□□□□□ -1.64
RPL39-201ENST00000361575 KLHL9Q9P2J3 617 aa4.81□□□□□ -1.64
RPL39-201ENST00000361575 FBXL2Q9UKC9 423 aa4.81□□□□□ -1.64
RPL39-201ENST00000361575 AGO1Q9UL18 857 aaKnown RBP4.81□□□□□ -1.64
RPL39-201ENST00000361575 KLHL20Q9Y2M5 609 aa4.81□□□□□ -1.64
RPL39-201ENST00000361575 PAM16Q9Y3D7 125 aa4.81□□□□□ -1.64
RPL39-201ENST00000361575 PTGDR2Q9Y5Y4 395 aa4.81□□□□□ -1.64
RPL39-201ENST00000361575 OR2M5A3KFT3 312 aa4.8□□□□□ -1.64
RPL39-201ENST00000361575 ANKUB1A6NFN9 424 aa4.8□□□□□ -1.64
RPL39-201ENST00000361575 ANXA2P2A6NMY6 339 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms