RNA–Protein interactions for RNA: ENST00000361439.8

NSMCE1-201, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE1, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-201ENST00000361439 NDUFS3O75489 264 aa13.63□□□□□ -0.23
NSMCE1-201ENST00000361439 OR56A5P0C7T3 313 aa13.63□□□□□ -0.23
NSMCE1-201ENST00000361439 ALPPL2P10696 532 aa13.63□□□□□ -0.23
NSMCE1-201ENST00000361439 STX2P32856 288 aa13.63□□□□□ -0.23
NSMCE1-201ENST00000361439 PHBP35232 272 aa13.63□□□□□ -0.23
NSMCE1-201ENST00000361439 PLOD1Q02809 727 aaPredicted RBP13.63□□□□□ -0.23
NSMCE1-201ENST00000361439 DMPKQ09013 629 aa13.63□□□□□ -0.23
NSMCE1-201ENST00000361439 MGAT5Q09328 741 aa13.63□□□□□ -0.23
NSMCE1-201ENST00000361439 HSP90AA5PQ58FG0 334 aa13.63□□□□□ -0.23
NSMCE1-201ENST00000361439 HP1BP3Q5SSJ5 553 aaPredicted RBP13.63□□□□□ -0.23
NSMCE1-201ENST00000361439 ZNF470Q6ECI4 717 aa13.63□□□□□ -0.23
NSMCE1-201ENST00000361439 TMEM220Q6QAJ8 160 aa13.63□□□□□ -0.23
NSMCE1-201ENST00000361439 MARK2Q7KZI7 788 aaKnown RBP13.63□□□□□ -0.23
NSMCE1-201ENST00000361439 KANSL1Q7Z3B3 1105 aa13.63□□□□□ -0.23
NSMCE1-201ENST00000361439 RD3Q7Z3Z2 195 aa13.63□□□□□ -0.23
NSMCE1-201ENST00000361439 SLC26A11Q86WA9 606 aa13.63□□□□□ -0.23
NSMCE1-201ENST00000361439 TRAPPC5Q8IUR0 188 aa13.63□□□□□ -0.23
NSMCE1-201ENST00000361439 ZNF547Q8IVP9 402 aa13.63□□□□□ -0.23
NSMCE1-201ENST00000361439 OTUD6BQ8N6M0 293 aa13.63□□□□□ -0.23
NSMCE1-201ENST00000361439 C2CD4AQ8NCU7 369 aaPredicted RBP13.63□□□□□ -0.23
NSMCE1-201ENST00000361439 TMEM168Q9H0V1 697 aa13.63□□□□□ -0.23
NSMCE1-201ENST00000361439 IL21RQ9HBE5 538 aa13.63□□□□□ -0.23
NSMCE1-201ENST00000361439 LRRC4CQ9HCJ2 640 aa13.63□□□□□ -0.23
NSMCE1-201ENST00000361439 ARFGAP3Q9NP61 516 aa13.63□□□□□ -0.23
NSMCE1-201ENST00000361439 PPANQ9NQ55 473 aaKnown RBP13.63□□□□□ -0.23
NSMCE1-201ENST00000361439 NLGN3Q9NZ94 848 aa13.63□□□□□ -0.23
NSMCE1-201ENST00000361439 NCKIPSDQ9NZQ3 722 aa13.63□□□□□ -0.23
NSMCE1-201ENST00000361439 MARCH4Q9P2E8 410 aaPredicted RBP13.63□□□□□ -0.23
NSMCE1-201ENST00000361439 GPSM3Q9Y4H4 160 aa13.63□□□□□ -0.23
NSMCE1-201ENST00000361439 COMMD10Q9Y6G5 202 aa13.63□□□□□ -0.23
NSMCE1-201ENST00000361439 LAMA1P25391 3075 aa13.63□□□□□ -0.23
NSMCE1-201ENST00000361439 C4orf47A7E2U8 309 aa13.62□□□□□ -0.23
NSMCE1-201ENST00000361439 GOLGA8KD6RF30 607 aa13.62□□□□□ -0.23
NSMCE1-201ENST00000361439 GOLGA8TH3BQL2 631 aa13.62□□□□□ -0.23
NSMCE1-201ENST00000361439 S1PR4O95977 384 aa13.62□□□□□ -0.23
NSMCE1-201ENST00000361439 FTH1P02794 183 aa13.62□□□□□ -0.23
NSMCE1-201ENST00000361439 ESR1P03372 595 aa13.62□□□□□ -0.23
NSMCE1-201ENST00000361439 ANXA6P08133 673 aa13.62□□□□□ -0.23
NSMCE1-201ENST00000361439 PRSS56P0CW18 603 aa13.62□□□□□ -0.23
NSMCE1-201ENST00000361439 ERVK-10P10266 1014 aa13.62□□□□□ -0.23
NSMCE1-201ENST00000361439 GRK6P43250 576 aa13.62□□□□□ -0.23
NSMCE1-201ENST00000361439 LEPRP48357 1165 aaKnown RBP13.62□□□□□ -0.23
NSMCE1-201ENST00000361439 CTSCP53634 463 aa13.62□□□□□ -0.23
NSMCE1-201ENST00000361439 CTBSQ01459 385 aa13.62□□□□□ -0.23
NSMCE1-201ENST00000361439 NAB1Q13506 487 aa13.62□□□□□ -0.23
NSMCE1-201ENST00000361439 SEMA3AQ14563 771 aa13.62□□□□□ -0.23
NSMCE1-201ENST00000361439 ZNF542PQ5EBM4 170 aa13.62□□□□□ -0.23
NSMCE1-201ENST00000361439 PRAMEF14Q5SWL7 426 aa13.62□□□□□ -0.23
NSMCE1-201ENST00000361439 ZNF648Q5T619 568 aaPredicted RBP13.62□□□□□ -0.23
NSMCE1-201ENST00000361439 TEDDM1Q5T9Z0 273 aa13.62□□□□□ -0.23
NSMCE1-201ENST00000361439 STPG1Q5TH74 334 aa13.62□□□□□ -0.23
NSMCE1-201ENST00000361439 KCTD16Q68DU8 428 aa13.62□□□□□ -0.23
NSMCE1-201ENST00000361439 CCNI2Q6ZMN8 369 aaPredicted RBP13.62□□□□□ -0.23
NSMCE1-201ENST00000361439 TRMT10CQ7L0Y3 403 aaKnown RBP13.62□□□□□ -0.23
NSMCE1-201ENST00000361439 C11orf96Q7Z7L8 435 aa13.62□□□□□ -0.23
NSMCE1-201ENST00000361439 AMZ2Q86W34 360 aa13.62□□□□□ -0.23
NSMCE1-201ENST00000361439 CNPY4Q8N129 248 aa13.62□□□□□ -0.23
NSMCE1-201ENST00000361439 SLC25A45Q8N413 288 aa13.62□□□□□ -0.23
NSMCE1-201ENST00000361439 OR2L2Q8NH16 312 aa13.62□□□□□ -0.23
NSMCE1-201ENST00000361439 LMX1AQ8TE12 382 aa13.62□□□□□ -0.23
NSMCE1-201ENST00000361439 LPGAT1Q92604 370 aa13.62□□□□□ -0.23
NSMCE1-201ENST00000361439 SGF29Q96ES7 293 aa13.62□□□□□ -0.23
NSMCE1-201ENST00000361439 BOCQ9BWV1 1114 aa13.62□□□□□ -0.23
NSMCE1-201ENST00000361439 FUT8Q9BYC5 575 aa13.62□□□□□ -0.23
NSMCE1-201ENST00000361439 P2RY12Q9H244 342 aa13.62□□□□□ -0.23
NSMCE1-201ENST00000361439 TCEAL2Q9H3H9 227 aaPredicted RBP13.62□□□□□ -0.23
NSMCE1-201ENST00000361439 RXFP3Q9NSD7 469 aa13.62□□□□□ -0.23
NSMCE1-201ENST00000361439 ZFATQ9P243 1243 aa13.62□□□□□ -0.23
NSMCE1-201ENST00000361439 GNPTGQ9UJJ9 305 aa13.62□□□□□ -0.23
NSMCE1-201ENST00000361439 FBXO5Q9UKT4 447 aa13.62□□□□□ -0.23
NSMCE1-201ENST00000361439 CORO1CQ9ULV4 474 aaPredicted RBP13.62□□□□□ -0.23
NSMCE1-201ENST00000361439 TCRBV9S1A1TA0A576 114 aa13.61□□□□□ -0.23
NSMCE1-201ENST00000361439 MGAT4DA6NG13 374 aa13.61□□□□□ -0.23
NSMCE1-201ENST00000361439 PRR19A6NJB7 356 aa13.61□□□□□ -0.23
NSMCE1-201ENST00000361439 OR2AG2A6NM03 316 aa13.61□□□□□ -0.23
NSMCE1-201ENST00000361439 KPNA5O15131 536 aa13.61□□□□□ -0.23
NSMCE1-201ENST00000361439 SGTAO43765 313 aa13.61□□□□□ -0.23
NSMCE1-201ENST00000361439 OR1I1O60431 355 aa13.61□□□□□ -0.23
NSMCE1-201ENST00000361439 POP7O75817 140 aaKnown RBP13.61□□□□□ -0.23
NSMCE1-201ENST00000361439 SLC2A4P14672 509 aa13.61□□□□□ -0.23
NSMCE1-201ENST00000361439 SLC1A2P43004 574 aa13.61□□□□□ -0.23
NSMCE1-201ENST00000361439 GPX6P59796 221 aa13.61□□□□□ -0.23
NSMCE1-201ENST00000361439 BNIP3Q12983 259 aa13.61□□□□□ -0.23
NSMCE1-201ENST00000361439 RPA4Q13156 261 aa13.61□□□□□ -0.23
NSMCE1-201ENST00000361439 INSCQ1MX18 579 aa13.61□□□□□ -0.23
NSMCE1-201ENST00000361439 TRMT10BQ6PF06 316 aaKnown RBP13.61□□□□□ -0.23
NSMCE1-201ENST00000361439 WASH2PQ6VEQ5 465 aa13.61□□□□□ -0.23
NSMCE1-201ENST00000361439 CHST15Q7LFX5 561 aaPredicted RBP13.61□□□□□ -0.23
NSMCE1-201ENST00000361439 TAF8Q7Z7C8 310 aa13.61□□□□□ -0.23
NSMCE1-201ENST00000361439 BEND7Q8N7W2 519 aaPredicted RBP13.61□□□□□ -0.23
NSMCE1-201ENST00000361439 FAM181AQ8N9Y4 354 aa13.61□□□□□ -0.23
NSMCE1-201ENST00000361439 OR4C6Q8NH72 309 aa13.61□□□□□ -0.23
NSMCE1-201ENST00000361439 C9orf72Q96LT7 481 aa13.61□□□□□ -0.23
NSMCE1-201ENST00000361439 PANX3Q96QZ0 392 aa13.61□□□□□ -0.23
NSMCE1-201ENST00000361439 CCM2Q9BSQ5 444 aa13.61□□□□□ -0.23
NSMCE1-201ENST00000361439 WASH6PQ9NQA3 447 aa13.61□□□□□ -0.23
NSMCE1-201ENST00000361439 IARS2Q9NSE4 1012 aaKnown RBP13.61□□□□□ -0.23
NSMCE1-201ENST00000361439 KLHL42Q9P2K6 505 aa13.61□□□□□ -0.23
NSMCE1-201ENST00000361439 PCOLCE2Q9UKZ9 415 aa13.61□□□□□ -0.23
NSMCE1-201ENST00000361439 ACSL5Q9ULC5 683 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms