RNA–Protein interactions for RNA: ENST00000359541.6

GTF3C2-202, Transcript of general transcription factor IIIC subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C2, Length 3,992 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-202ENST00000359541 SNX20Q7Z614 316 aa9.21□□□□□ -0.94
GTF3C2-202ENST00000359541 TMEM173Q86WV6 379 aaPredicted RBP9.21□□□□□ -0.94
GTF3C2-202ENST00000359541 TMEM102Q8N9M5 508 aaPredicted RBP9.21□□□□□ -0.94
GTF3C2-202ENST00000359541 OSCP1Q8WVF1 389 aa9.21□□□□□ -0.94
GTF3C2-202ENST00000359541 PRPF18Q99633 342 aaKnown RBP9.21□□□□□ -0.94
GTF3C2-202ENST00000359541 ZNF696Q9H7X3 374 aa9.21□□□□□ -0.94
GTF3C2-202ENST00000359541 LATS2Q9NRM7 1088 aa9.21□□□□□ -0.94
GTF3C2-202ENST00000359541 MRPL17Q9NRX2 175 aaKnown RBP9.21□□□□□ -0.94
GTF3C2-202ENST00000359541 HCSTQ9UBK5 93 aa9.21□□□□□ -0.94
GTF3C2-202ENST00000359541 PADI4Q9UM07 663 aa9.21□□□□□ -0.94
GTF3C2-202ENST00000359541 THSD7BQ9C0I4 1608 aa9.2□□□□□ -0.94
GTF3C2-202ENST00000359541 C1orf232A0A0U1RR37 186 aa9.2□□□□□ -0.94
GTF3C2-202ENST00000359541 ADAM12O43184 909 aa9.2□□□□□ -0.94
GTF3C2-202ENST00000359541 RGS14O43566 566 aa9.2□□□□□ -0.94
GTF3C2-202ENST00000359541 PRLP01236 227 aa9.2□□□□□ -0.94
GTF3C2-202ENST00000359541 HMGA1P17096 107 aaKnown RBP9.2□□□□□ -0.94
GTF3C2-202ENST00000359541 NFKBIAP25963 317 aa9.2□□□□□ -0.94
GTF3C2-202ENST00000359541 FOXA1P55317 472 aa9.2□□□□□ -0.94
GTF3C2-202ENST00000359541 EEFSECP57772 596 aaKnown RBP9.2□□□□□ -0.94
GTF3C2-202ENST00000359541 ESRRGP62508 458 aa9.2□□□□□ -0.94
GTF3C2-202ENST00000359541 CRY1Q16526 586 aa9.2□□□□□ -0.94
GTF3C2-202ENST00000359541 ERMP1Q7Z2K6 904 aa9.2□□□□□ -0.94
GTF3C2-202ENST00000359541 MILR1Q7Z6M3 343 aa9.2□□□□□ -0.94
GTF3C2-202ENST00000359541 DNAJB7Q7Z6W7 309 aaPredicted RBP9.2□□□□□ -0.94
GTF3C2-202ENST00000359541 SYVN1Q86TM6 617 aa9.2□□□□□ -0.94
GTF3C2-202ENST00000359541 PROSER1Q86XN7 944 aa9.2□□□□□ -0.94
GTF3C2-202ENST00000359541 FAM9CQ8IZT9 166 aa9.2□□□□□ -0.94
GTF3C2-202ENST00000359541 LILRA2Q8N149 483 aa9.2□□□□□ -0.94
GTF3C2-202ENST00000359541 TTC30BQ8N4P2 665 aa9.2□□□□□ -0.94
GTF3C2-202ENST00000359541 AADATQ8N5Z0 425 aa9.2□□□□□ -0.94
GTF3C2-202ENST00000359541 DGCR14Q96DF8 476 aaKnown RBP9.2□□□□□ -0.94
GTF3C2-202ENST00000359541 PDLIM5Q96HC4 596 aaKnown RBP9.2□□□□□ -0.94
GTF3C2-202ENST00000359541 BIRC8Q96P09 236 aa9.2□□□□□ -0.94
GTF3C2-202ENST00000359541 FEM1AQ9BSK4 669 aa9.2□□□□□ -0.94
GTF3C2-202ENST00000359541 ZBED2Q9BTP6 218 aa9.2□□□□□ -0.94
GTF3C2-202ENST00000359541 TM6SF2Q9BZW4 377 aa9.2□□□□□ -0.94
GTF3C2-202ENST00000359541 ALG2Q9H553 416 aa9.2□□□□□ -0.94
GTF3C2-202ENST00000359541 COQ10BQ9H8M1 238 aa9.2□□□□□ -0.94
GTF3C2-202ENST00000359541 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.2□□□□□ -0.94
GTF3C2-202ENST00000359541 PNPLA3Q9NST1 481 aa9.2□□□□□ -0.94
GTF3C2-202ENST00000359541 IL17CQ9P0M4 197 aa9.2□□□□□ -0.94
GTF3C2-202ENST00000359541 ABCD2Q9UBJ2 740 aa9.2□□□□□ -0.94
GTF3C2-202ENST00000359541 MAFFQ9ULX9 164 aa9.2□□□□□ -0.94
GTF3C2-202ENST00000359541 MYRFQ9Y2G1 1151 aa9.2□□□□□ -0.94
GTF3C2-202ENST00000359541 FCF1Q9Y324 198 aaKnown RBP9.2□□□□□ -0.94
GTF3C2-202ENST00000359541 GRXCR2A6NFK2 248 aa9.2□□□□□ -0.94
GTF3C2-202ENST00000359541 SOCS5O75159 536 aa9.2□□□□□ -0.94
GTF3C2-202ENST00000359541 OR4F21O95013 312 aa9.2□□□□□ -0.94
GTF3C2-202ENST00000359541 PGLSO95336 258 aa9.2□□□□□ -0.94
GTF3C2-202ENST00000359541 ATP6V1B1P15313 513 aa9.2□□□□□ -0.94
GTF3C2-202ENST00000359541 CD1EP15812 388 aa9.2□□□□□ -0.94
GTF3C2-202ENST00000359541 CTPS1P17812 591 aa9.2□□□□□ -0.94
GTF3C2-202ENST00000359541 CSKP41240 450 aa9.2□□□□□ -0.94
GTF3C2-202ENST00000359541 TSTA3Q13630 321 aaPredicted RBP9.2□□□□□ -0.94
GTF3C2-202ENST00000359541 CYP51A1Q16850 503 aa9.2□□□□□ -0.94
GTF3C2-202ENST00000359541 GPR33Q49SQ1 333 aa9.2□□□□□ -0.94
GTF3C2-202ENST00000359541 HABP4Q5JVS0 413 aaKnown RBP9.2□□□□□ -0.94
GTF3C2-202ENST00000359541 LCN8Q6JVE9 175 aa9.2□□□□□ -0.94
GTF3C2-202ENST00000359541 CXorf57Q6NSI4 855 aaKnown RBP9.2□□□□□ -0.94
GTF3C2-202ENST00000359541 FBXL19Q6PCT2 694 aa9.2□□□□□ -0.94
GTF3C2-202ENST00000359541 SERPINA9Q86WD7 417 aa9.2□□□□□ -0.94
GTF3C2-202ENST00000359541 FUNDC1Q8IVP5 155 aa9.2□□□□□ -0.94
GTF3C2-202ENST00000359541 PIANPQ8IYJ0 282 aa9.2□□□□□ -0.94
GTF3C2-202ENST00000359541 SDCCAG3Q96C92 435 aa9.2□□□□□ -0.94
GTF3C2-202ENST00000359541 SCLYQ96I15 445 aa9.2□□□□□ -0.94
GTF3C2-202ENST00000359541 C19orf43Q9BQ61 176 aa9.2□□□□□ -0.94
GTF3C2-202ENST00000359541 SLC39A3Q9BRY0 314 aa9.2□□□□□ -0.94
GTF3C2-202ENST00000359541 APOL5Q9BWW9 433 aa9.2□□□□□ -0.94
GTF3C2-202ENST00000359541 EPB41L1Q9H4G0 881 aa9.2□□□□□ -0.94
GTF3C2-202ENST00000359541 NOL11Q9H8H0 719 aaKnown RBP9.2□□□□□ -0.94
GTF3C2-202ENST00000359541 CCM2LQ9NUG4 571 aaPredicted RBP9.2□□□□□ -0.94
GTF3C2-202ENST00000359541 OPTCQ9UBM4 332 aa9.2□□□□□ -0.94
GTF3C2-202ENST00000359541 VPS51Q9UID3 782 aa9.2□□□□□ -0.94
GTF3C2-202ENST00000359541 ANAPC2Q9UJX6 822 aa9.2□□□□□ -0.94
GTF3C2-202ENST00000359541 AP3M1Q9Y2T2 418 aa9.2□□□□□ -0.94
GTF3C2-202ENST00000359541 KLHL33A6NCF5 533 aa9.2□□□□□ -0.94
GTF3C2-202ENST00000359541 INPP4BO15327 924 aa9.2□□□□□ -0.94
GTF3C2-202ENST00000359541 OR1I1O60431 355 aa9.2□□□□□ -0.94
GTF3C2-202ENST00000359541 FKTNO75072 461 aa9.2□□□□□ -0.94
GTF3C2-202ENST00000359541 EEDO75530 441 aaKnown RBP9.2□□□□□ -0.94
GTF3C2-202ENST00000359541 TIPRLO75663 272 aa9.2□□□□□ -0.94
GTF3C2-202ENST00000359541 TRIM16O95361 564 aa9.2□□□□□ -0.94
GTF3C2-202ENST00000359541 PGM3O95394 542 aa9.2□□□□□ -0.94
GTF3C2-202ENST00000359541 LAG3P18627 525 aa9.2□□□□□ -0.94
GTF3C2-202ENST00000359541 MSH3P20585 1137 aa9.2□□□□□ -0.94
GTF3C2-202ENST00000359541 CAPN3P20807 821 aa9.2□□□□□ -0.94
GTF3C2-202ENST00000359541 RPS3P23396 243 aaKnown RBP eCLIP9.2□□□□□ -0.946e-12■□□□□ 10.2
GTF3C2-202ENST00000359541 PLOD1Q02809 727 aaPredicted RBP9.2□□□□□ -0.94
GTF3C2-202ENST00000359541 CNPY1Q3B7I2 92 aa9.2□□□□□ -0.94
GTF3C2-202ENST00000359541 MPPE1Q53F39 396 aa9.2□□□□□ -0.94
GTF3C2-202ENST00000359541 MTX3Q5HYI7 312 aa9.2□□□□□ -0.94
GTF3C2-202ENST00000359541 CACHD1Q5VU97 1274 aa9.2□□□□□ -0.94
GTF3C2-202ENST00000359541 FAM151BQ6UXP7 276 aa9.2□□□□□ -0.94
GTF3C2-202ENST00000359541 LYSMD3Q7Z3D4 306 aa9.2□□□□□ -0.94
GTF3C2-202ENST00000359541 AMIGO2Q86SJ2 522 aa9.2□□□□□ -0.94
GTF3C2-202ENST00000359541 TICAM1Q8IUC6 712 aa9.2□□□□□ -0.94
GTF3C2-202ENST00000359541 SLC15A3Q8IY34 581 aa9.2□□□□□ -0.94
GTF3C2-202ENST00000359541 ANKFN1Q8N957 763 aa9.2□□□□□ -0.94
GTF3C2-202ENST00000359541 HMGCLL1Q8TB92 370 aa9.2□□□□□ -0.94
GTF3C2-202ENST00000359541 DNAJB14Q8TBM8 379 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms