RNA–Protein interactions for RNA: ENST00000359052.8

SMARCAD1-202, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best)

Gene SMARCAD1, Length 5,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-202ENST00000359052 IFIH1Q9BYX4 1025 aaKnown RBP1.84□□□□□ -2.11
SMARCAD1-202ENST00000359052 CLK4Q9HAZ1 481 aaKnown RBP1.84□□□□□ -2.11
SMARCAD1-202ENST00000359052 MAGEE1Q9HCI5 957 aa1.84□□□□□ -2.11
SMARCAD1-202ENST00000359052 CYP4F12Q9HCS2 524 aa1.84□□□□□ -2.11
SMARCAD1-202ENST00000359052 CPSF2Q9P2I0 782 aaKnown RBP1.84□□□□□ -2.11
SMARCAD1-202ENST00000359052 GULP1Q9UBP9 304 aa1.84□□□□□ -2.11
SMARCAD1-202ENST00000359052 ITGA11Q9UKX5 1188 aa1.84□□□□□ -2.11
SMARCAD1-202ENST00000359052 TRAF3IP3Q9Y228 551 aa1.84□□□□□ -2.11
SMARCAD1-202ENST00000359052 WNT6Q9Y6F9 365 aa1.84□□□□□ -2.11
SMARCAD1-202ENST00000359052 CASTOR2A6NHX0 329 aa1.84□□□□□ -2.11
SMARCAD1-202ENST00000359052 VWC2LB2RUY7 222 aa1.84□□□□□ -2.11
SMARCAD1-202ENST00000359052 C22orf46C9J442 243 aa1.84□□□□□ -2.11
SMARCAD1-202ENST00000359052 TNFRSF13BO14836 293 aaPredicted RBP1.84□□□□□ -2.11
SMARCAD1-202ENST00000359052 WDR46O15213 610 aaKnown RBP1.84□□□□□ -2.11
SMARCAD1-202ENST00000359052 EXOC3O60645 756 aa1.84□□□□□ -2.11
SMARCAD1-202ENST00000359052 OTCP00480 354 aa1.84□□□□□ -2.11
SMARCAD1-202ENST00000359052 ABHD2P08910 425 aa1.84□□□□□ -2.11
SMARCAD1-202ENST00000359052 TMEM11P17152 192 aa1.84□□□□□ -2.11
SMARCAD1-202ENST00000359052 ANP32AP39687 249 aaKnown RBP1.84□□□□□ -2.11
SMARCAD1-202ENST00000359052 EIF2DP41214 584 aaKnown RBP1.84□□□□□ -2.11
SMARCAD1-202ENST00000359052 KIR2DL3P43628 341 aa1.84□□□□□ -2.11
SMARCAD1-202ENST00000359052 SNRPNP63162 240 aaKnown RBP1.84□□□□□ -2.11
SMARCAD1-202ENST00000359052 CSTF3Q12996 717 aaKnown RBP1.84□□□□□ -2.11
SMARCAD1-202ENST00000359052 RIPK1Q13546 671 aa1.84□□□□□ -2.11
SMARCAD1-202ENST00000359052 DPYSL3Q14195 570 aa1.84□□□□□ -2.11
SMARCAD1-202ENST00000359052 PNLIPRP3Q17RR3 467 aa1.84□□□□□ -2.11
SMARCAD1-202ENST00000359052 FAM47CQ5HY64 1035 aa1.84□□□□□ -2.11
SMARCAD1-202ENST00000359052 DNTTIP2Q5QJE6 756 aaKnown RBP1.84□□□□□ -2.11
SMARCAD1-202ENST00000359052 SASS6Q6UVJ0 657 aa1.84□□□□□ -2.11
SMARCAD1-202ENST00000359052 SLC7A5P1Q8MH63 180 aa1.84□□□□□ -2.11
SMARCAD1-202ENST00000359052 CRYBG2Q8N1P7 616 aa1.84□□□□□ -2.11
SMARCAD1-202ENST00000359052 ATP6V0A1Q93050 837 aa1.84□□□□□ -2.11
SMARCAD1-202ENST00000359052 EXOC4Q96A65 974 aa1.84□□□□□ -2.11
SMARCAD1-202ENST00000359052 RHBDF1Q96CC6 855 aa1.84□□□□□ -2.11
SMARCAD1-202ENST00000359052 PKP2Q99959 881 aa1.84□□□□□ -2.11
SMARCAD1-202ENST00000359052 CAPS2Q9BXY5 557 aa1.84□□□□□ -2.11
SMARCAD1-202ENST00000359052 MAGEB5Q9BZ81 275 aa1.84□□□□□ -2.11
SMARCAD1-202ENST00000359052 RACGAP1Q9H0H5 632 aa1.84□□□□□ -2.11
SMARCAD1-202ENST00000359052 SIK2Q9H0K1 926 aa1.84□□□□□ -2.11
SMARCAD1-202ENST00000359052 CDCP1Q9H5V8 836 aa1.84□□□□□ -2.11
SMARCAD1-202ENST00000359052 HAO2Q9NYQ3 351 aa1.84□□□□□ -2.11
SMARCAD1-202ENST00000359052 HMG20BQ9P0W2 317 aa1.84□□□□□ -2.11
SMARCAD1-202ENST00000359052 MBD1Q9UIS9 605 aaPredicted RBP1.84□□□□□ -2.11
SMARCAD1-202ENST00000359052 TMED5Q9Y3A6 229 aa1.84□□□□□ -2.11
SMARCAD1-202ENST00000359052 DMRT1Q9Y5R6 373 aa1.84□□□□□ -2.11
SMARCAD1-202ENST00000359052 COPG1Q9Y678 874 aaKnown RBP1.84□□□□□ -2.11
SMARCAD1-202ENST00000359052 TRBV5-7A0A0A0MS05 114 aa1.84□□□□□ -2.12
SMARCAD1-202ENST00000359052 UBXN8O00124 270 aa1.84□□□□□ -2.12
SMARCAD1-202ENST00000359052 ZBTB5O15062 677 aa1.84□□□□□ -2.12
SMARCAD1-202ENST00000359052 TRIM24O15164 1050 aa1.84□□□□□ -2.12
SMARCAD1-202ENST00000359052 KERAO60938 352 aa1.84□□□□□ -2.12
SMARCAD1-202ENST00000359052 SYF2O95926 243 aaKnown RBP1.84□□□□□ -2.12
SMARCAD1-202ENST00000359052 PCNAP12004 261 aa1.84□□□□□ -2.12
SMARCAD1-202ENST00000359052 PBX1P40424 430 aa1.84□□□□□ -2.12
SMARCAD1-202ENST00000359052 ETV1P50549 477 aa1.84□□□□□ -2.12
SMARCAD1-202ENST00000359052 BLKP51451 505 aa1.84□□□□□ -2.12
SMARCAD1-202ENST00000359052 CTSCP53634 463 aa1.84□□□□□ -2.12
SMARCAD1-202ENST00000359052 NOMO3P69849 1222 aa1.84□□□□□ -2.12
SMARCAD1-202ENST00000359052 OLR1P78380 273 aa1.84□□□□□ -2.12
SMARCAD1-202ENST00000359052 CYP2A13Q16696 494 aa1.84□□□□□ -2.12
SMARCAD1-202ENST00000359052 BTBD16Q32M84 506 aa1.84□□□□□ -2.12
SMARCAD1-202ENST00000359052 ZNF658BQ4V348 819 aaPredicted RBP1.84□□□□□ -2.12
SMARCAD1-202ENST00000359052 EPHA10Q5JZY3 1008 aa1.84□□□□□ -2.12
SMARCAD1-202ENST00000359052 CDKAL1Q5VV42 579 aa1.84□□□□□ -2.12
SMARCAD1-202ENST00000359052 B3GNTL1Q67FW5 361 aaPredicted RBP1.84□□□□□ -2.12
SMARCAD1-202ENST00000359052 ANKRD34AQ69YU3 496 aa1.84□□□□□ -2.12
SMARCAD1-202ENST00000359052 ZNF474Q6S9Z5 364 aaPredicted RBP1.84□□□□□ -2.12
SMARCAD1-202ENST00000359052 TMCO3Q6UWJ1 677 aa1.84□□□□□ -2.12
SMARCAD1-202ENST00000359052 LYPD4Q6UWN0 246 aa1.84□□□□□ -2.12
SMARCAD1-202ENST00000359052 IKBIPQ70UQ0 350 aa1.84□□□□□ -2.12
SMARCAD1-202ENST00000359052 CHST9Q7L1S5 443 aa1.84□□□□□ -2.12
SMARCAD1-202ENST00000359052 SRBD1Q8N5C6 995 aaKnown RBP1.84□□□□□ -2.12
SMARCAD1-202ENST00000359052 CCDC148Q8NFR7 591 aa1.84□□□□□ -2.12
SMARCAD1-202ENST00000359052 OR52B4Q8NGK2 314 aa1.84□□□□□ -2.12
SMARCAD1-202ENST00000359052 MIB2Q96AX9 1013 aa1.84□□□□□ -2.12
SMARCAD1-202ENST00000359052 ZNF479Q96JC4 524 aa1.84□□□□□ -2.12
SMARCAD1-202ENST00000359052 WRNIP1Q96S55 665 aa1.84□□□□□ -2.12
SMARCAD1-202ENST00000359052 UBE2OQ9C0C9 1292 aaKnown RBP1.84□□□□□ -2.12
SMARCAD1-202ENST00000359052 LACRTQ9GZZ8 138 aa1.84□□□□□ -2.12
SMARCAD1-202ENST00000359052 TLE6Q9H808 572 aa1.84□□□□□ -2.12
SMARCAD1-202ENST00000359052 ACTR8Q9H981 624 aa1.84□□□□□ -2.12
SMARCAD1-202ENST00000359052 KCNK13Q9HB14 408 aa1.84□□□□□ -2.12
SMARCAD1-202ENST00000359052 ZFP64Q9NPA5 681 aa1.84□□□□□ -2.12
SMARCAD1-202ENST00000359052 DNAJC17Q9NVM6 304 aaKnown RBP1.84□□□□□ -2.12
SMARCAD1-202ENST00000359052 TEKT2Q9UIF3 430 aa1.84□□□□□ -2.12
SMARCAD1-202ENST00000359052 PTBP2Q9UKA9 531 aaKnown RBP1.84□□□□□ -2.12
SMARCAD1-202ENST00000359052 DDX52Q9Y2R4 599 aaKnown RBP eCLIP1.84□□□□□ -2.12
SMARCAD1-202ENST00000359052 EVC2Q86UK5 1308 aa1.84□□□□□ -2.12
SMARCAD1-202ENST00000359052 SHISA7A6NL88 538 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 GRM8O00222 908 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 O00370 1275 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 NOP56O00567 594 aaKnown RBP1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 NBR2O15453 112 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 SMAD6O43541 496 aaKnown RBP1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 CYP1A1P04798 512 aaPredicted RBP1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 SRMP19623 302 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 SDHBP21912 280 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 MSH2P43246 934 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 PSMC4P43686 418 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 CLDN2P57739 230 aa1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms