RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 DMC1Q14565 340 aa6.51□□□□□ -1.37
CSDE1-203ENST00000358528 C18orf21Q32NC0 220 aaPredicted RBP6.51□□□□□ -1.37
CSDE1-203ENST00000358528 FAM174BQ3ZCQ3 159 aa6.51□□□□□ -1.37
CSDE1-203ENST00000358528 TBPL2Q6SJ96 375 aa6.51□□□□□ -1.37
CSDE1-203ENST00000358528 NCCRP1Q6ZVX7 275 aaPredicted RBP6.51□□□□□ -1.37
CSDE1-203ENST00000358528 DET1Q7L5Y6 550 aa6.51□□□□□ -1.37
CSDE1-203ENST00000358528 EFL1Q7Z2Z2 1120 aaKnown RBP6.51□□□□□ -1.37
CSDE1-203ENST00000358528 ARHGAP12Q8IWW6 846 aa6.51□□□□□ -1.37
CSDE1-203ENST00000358528 POC5Q8NA72 575 aa6.51□□□□□ -1.37
CSDE1-203ENST00000358528 CNIH3Q8TBE1 160 aa6.51□□□□□ -1.37
CSDE1-203ENST00000358528 PTCD2Q8WV60 388 aaKnown RBP6.51□□□□□ -1.37
CSDE1-203ENST00000358528 SNX19Q92543 992 aa6.51□□□□□ -1.37
CSDE1-203ENST00000358528 ZUFSPQ96AP4 578 aa6.51□□□□□ -1.37
CSDE1-203ENST00000358528 TSSK3Q96PN8 268 aa6.51□□□□□ -1.37
CSDE1-203ENST00000358528 SEZ6LQ9BYH1 1024 aa6.51□□□□□ -1.37
CSDE1-203ENST00000358528 SLC2A11Q9BYW1 496 aa6.51□□□□□ -1.37
CSDE1-203ENST00000358528 FAM124BQ9H5Z6 455 aaPredicted RBP6.51□□□□□ -1.37
CSDE1-203ENST00000358528 PARVBQ9HBI1 364 aa6.51□□□□□ -1.37
CSDE1-203ENST00000358528 CD320Q9NPF0 282 aa6.51□□□□□ -1.37
CSDE1-203ENST00000358528 SCUBE2Q9NQ36 999 aa6.51□□□□□ -1.37
CSDE1-203ENST00000358528 AGPAT4Q9NRZ5 378 aa6.51□□□□□ -1.37
CSDE1-203ENST00000358528 ADARB2Q9NS39 739 aaKnown RBP6.51□□□□□ -1.37
CSDE1-203ENST00000358528 INTS10Q9NVR2 710 aaKnown RBP6.51□□□□□ -1.37
CSDE1-203ENST00000358528 GMIPQ9P107 970 aa6.51□□□□□ -1.37
CSDE1-203ENST00000358528 CD300AQ9UGN4 299 aa6.51□□□□□ -1.37
CSDE1-203ENST00000358528 PSME2Q9UL46 239 aa6.51□□□□□ -1.37
CSDE1-203ENST00000358528 VPS4AQ9UN37 437 aa6.51□□□□□ -1.37
CSDE1-203ENST00000358528 COL11A1P12107 1806 aaPredicted RBP6.51□□□□□ -1.37
CSDE1-203ENST00000358528 A0A1B0GTL3 188 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 A0A1W2PQ67 120 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 TYW5A2RUC4 315 aaKnown RBP6.5□□□□□ -1.37
CSDE1-203ENST00000358528 BTBD19C9JJ37 291 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 ARVCFO00192 962 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 RPP40O75818 363 aaKnown RBP6.5□□□□□ -1.37
CSDE1-203ENST00000358528 CLPXO76031 633 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 MYCLP1P12525 358 aaPredicted RBP6.5□□□□□ -1.37
CSDE1-203ENST00000358528 MC4RP32245 332 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 LEPRP48357 1165 aaKnown RBP6.5□□□□□ -1.37
CSDE1-203ENST00000358528 ACADVLP49748 655 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 CDKN1CP49918 316 aaPredicted RBP6.5□□□□□ -1.37
CSDE1-203ENST00000358528 VBP1P61758 197 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 MRPS15P82914 257 aaKnown RBP6.5□□□□□ -1.37
CSDE1-203ENST00000358528 PTGR1Q14914 329 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 MOGQ16653 247 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 BRMS1LQ5PSV4 323 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 NOL9Q5SY16 702 aaKnown RBP6.5□□□□□ -1.37
CSDE1-203ENST00000358528 C6orf183Q5T699 404 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 CACHD1Q5VU97 1274 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 ANKRD34AQ69YU3 496 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 UGT3A1Q6NUS8 523 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 TMEM207Q6UWW9 146 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 LINGO4Q6UY18 593 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 DCDC5Q6ZRR9 648 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 SYVN1Q86TM6 617 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 PACRGLQ8N7B6 248 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 OR52B6Q8NGF0 335 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 MCOLN3Q8TDD5 553 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 ADAM2Q99965 735 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 MYOCQ99972 504 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 TRIM54Q9BYV2 358 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 ASPSCR1Q9BZE9 553 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 NMUR1Q9HB89 426 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 ARMC1Q9NVT9 282 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 TBC1D30Q9Y2I9 924 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 A8MU76 341 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 TARM1B6A8C7 271 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 F5H5T6 163 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 hCG_2039718K7EN88 272 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 RGS5O15539 181 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 GPR39O43194 453 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 OR1I1O60431 355 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 DFNA5O60443 496 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 VPS4BO75351 444 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 ANGPTL1O95841 491 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 FUCA1P04066 466 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 NTRK1P04629 796 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 AQP1P29972 269 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 CYP2C18P33260 490 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 SHMT2P34897 504 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 POLR2IP36954 125 aaKnown RBP6.5□□□□□ -1.37
CSDE1-203ENST00000358528 OPRL1P41146 370 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 HALP42357 657 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 ZNF135P52742 658 aaPredicted RBP6.5□□□□□ -1.37
CSDE1-203ENST00000358528 CRYBB1P53674 252 aaPredicted RBP6.5□□□□□ -1.37
CSDE1-203ENST00000358528 OXCT1P55809 520 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 KCNAB2Q13303 367 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 ZNF846Q147U1 533 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 ATP6AP1Q15904 470 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 SYT16Q17RD7 645 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 SLC36A3Q495N2 470 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 INTS11Q5TA45 600 aaKnown RBP6.5□□□□□ -1.37
CSDE1-203ENST00000358528 ZNF773Q6PK81 442 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 BLOC1S3Q6QNY0 202 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 ENPP6Q6UWR7 440 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 MAMDC4Q6UXC1 1216 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 RNF19BQ6ZMZ0 732 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 GPC2Q8N158 579 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 ARL10Q8N8L6 244 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 PSD4Q8NDX1 1056 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 TBC1D15Q8TC07 691 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms