RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 MGME1Q9BQP7 344 aa9.69□□□□□ -0.86
CHD3-202ENST00000358181 MTRRQ9UBK8 725 aa9.69□□□□□ -0.86
CHD3-202ENST00000358181 FBXL3Q9UKT7 428 aa9.69□□□□□ -0.86
CHD3-202ENST00000358181 ITGA11Q9UKX5 1188 aa9.69□□□□□ -0.86
CHD3-202ENST00000358181 SAP18O00422 153 aaKnown RBP9.69□□□□□ -0.86
CHD3-202ENST00000358181 WNT10BO00744 389 aa9.69□□□□□ -0.86
CHD3-202ENST00000358181 ENDOUP21128 410 aaKnown RBP9.69□□□□□ -0.86
CHD3-202ENST00000358181 IDSP22304 550 aa9.69□□□□□ -0.86
CHD3-202ENST00000358181 ADAM8P78325 824 aa9.69□□□□□ -0.86
CHD3-202ENST00000358181 SEMA5AQ13591 1074 aa9.69□□□□□ -0.86
CHD3-202ENST00000358181 GIT2Q14161 759 aa9.69□□□□□ -0.86
CHD3-202ENST00000358181 CD302Q8IX05 232 aa9.69□□□□□ -0.86
CHD3-202ENST00000358181 LAS2Q8IYD9 372 aa9.69□□□□□ -0.86
CHD3-202ENST00000358181 ZNF709Q8N972 641 aa9.69□□□□□ -0.86
CHD3-202ENST00000358181 POC1BQ8TC44 478 aa9.69□□□□□ -0.86
CHD3-202ENST00000358181 TAS1R2Q8TE23 839 aa9.69□□□□□ -0.86
CHD3-202ENST00000358181 ZFRQ96KR1 1074 aaKnown RBP9.69□□□□□ -0.86
CHD3-202ENST00000358181 ABCC13Q9NSE7 274 aa9.69□□□□□ -0.86
CHD3-202ENST00000358181 PACSIN3Q9UKS6 424 aa9.69□□□□□ -0.86
CHD3-202ENST00000358181 HES2Q9Y543 173 aa9.69□□□□□ -0.86
CHD3-202ENST00000358181 MED14O60244 1454 aa9.69□□□□□ -0.86
CHD3-202ENST00000358181 A0A0U1RQJ8 604 aa9.69□□□□□ -0.86
CHD3-202ENST00000358181 ZMPSTE24O75844 475 aa9.69□□□□□ -0.86
CHD3-202ENST00000358181 LAMP2P13473 410 aa9.69□□□□□ -0.86
CHD3-202ENST00000358181 RPS12P25398 132 aaKnown RBP9.69□□□□□ -0.86
CHD3-202ENST00000358181 CTHP32929 405 aa9.69□□□□□ -0.86
CHD3-202ENST00000358181 RNF144AP50876 292 aaPredicted RBP9.69□□□□□ -0.86
CHD3-202ENST00000358181 MLLT6P55198 1093 aaPredicted RBP9.69□□□□□ -0.86
CHD3-202ENST00000358181 PGM5Q15124 567 aa9.69□□□□□ -0.86
CHD3-202ENST00000358181 SPANXN3Q5MJ09 141 aa9.69□□□□□ -0.86
CHD3-202ENST00000358181 TAPT1Q6NXT6 567 aa9.69□□□□□ -0.86
CHD3-202ENST00000358181 ENPP7Q6UWV6 458 aa9.69□□□□□ -0.86
CHD3-202ENST00000358181 GPR65Q8IYL9 337 aa9.69□□□□□ -0.86
CHD3-202ENST00000358181 OR52J3Q8NH60 311 aa9.69□□□□□ -0.86
CHD3-202ENST00000358181 ZDHHC15Q96MV8 337 aa9.69□□□□□ -0.86
CHD3-202ENST00000358181 FARSAQ9Y285 508 aaKnown RBP9.69□□□□□ -0.86
CHD3-202ENST00000358181 SAMHD1Q9Y3Z3 626 aaKnown RBP9.69□□□□□ -0.86
CHD3-202ENST00000358181 BACE2Q9Y5Z0 518 aa9.69□□□□□ -0.86
CHD3-202ENST00000358181 RPP14O95059 124 aaKnown RBP9.68□□□□□ -0.86
CHD3-202ENST00000358181 ITGA2P17301 1181 aa9.68□□□□□ -0.86
CHD3-202ENST00000358181 NYAP1Q6ZVC0 841 aa9.68□□□□□ -0.86
CHD3-202ENST00000358181 SLC29A4Q7RTT9 530 aa9.68□□□□□ -0.86
CHD3-202ENST00000358181 ZNF677Q86XU0 584 aa9.68□□□□□ -0.86
CHD3-202ENST00000358181 TNS4Q8IZW8 715 aa9.68□□□□□ -0.86
CHD3-202ENST00000358181 SPAG16Q8N0X2 631 aa9.68□□□□□ -0.86
CHD3-202ENST00000358181 OR10H4Q8NGA5 316 aa9.68□□□□□ -0.86
CHD3-202ENST00000358181 PRR11Q96HE9 360 aaPredicted RBP9.68□□□□□ -0.86
CHD3-202ENST00000358181 MTFR1LQ9H019 292 aa9.68□□□□□ -0.86
CHD3-202ENST00000358181 OR51B6Q9H340 312 aa9.68□□□□□ -0.86
CHD3-202ENST00000358181 SERINC1Q9NRX5 453 aa9.68□□□□□ -0.86
CHD3-202ENST00000358181 SEC14L3Q9UDX4 400 aa9.68□□□□□ -0.86
CHD3-202ENST00000358181 ST3GAL5Q9UNP4 418 aa9.68□□□□□ -0.86
CHD3-202ENST00000358181 CHRM5P08912 532 aaPredicted RBP9.68□□□□□ -0.86
CHD3-202ENST00000358181 TGFB3P10600 412 aa9.68□□□□□ -0.86
CHD3-202ENST00000358181 ACVR2AP27037 513 aa9.68□□□□□ -0.86
CHD3-202ENST00000358181 MXD1Q05195 221 aa9.68□□□□□ -0.86
CHD3-202ENST00000358181 NOMO2Q5JPE7 1267 aa9.68□□□□□ -0.86
CHD3-202ENST00000358181 CLPTM1LQ96KA5 538 aa9.68□□□□□ -0.86
CHD3-202ENST00000358181 PLEKHG4BQ96PX9 1271 aa9.68□□□□□ -0.86
CHD3-202ENST00000358181 SLC39A3Q9BRY0 314 aa9.68□□□□□ -0.86
CHD3-202ENST00000358181 UPB1Q9UBR1 384 aa9.68□□□□□ -0.86
CHD3-202ENST00000358181 ZNF225Q9UK10 706 aa9.68□□□□□ -0.86
CHD3-202ENST00000358181 OR2AG2A6NM03 316 aa9.68□□□□□ -0.86
CHD3-202ENST00000358181 RLN2P04090 185 aa9.68□□□□□ -0.86
CHD3-202ENST00000358181 ASLP04424 464 aa9.68□□□□□ -0.86
CHD3-202ENST00000358181 LTA4HP09960 611 aaKnown RBP9.68□□□□□ -0.86
CHD3-202ENST00000358181 CXCR1P25024 350 aa9.68□□□□□ -0.86
CHD3-202ENST00000358181 CXCR3P49682 368 aa9.68□□□□□ -0.86
CHD3-202ENST00000358181 KCNMA1Q12791 1236 aa9.68□□□□□ -0.86
CHD3-202ENST00000358181 CAMK2DQ13557 499 aa9.68□□□□□ -0.86
CHD3-202ENST00000358181 WSCD1Q658N2 575 aa9.68□□□□□ -0.86
CHD3-202ENST00000358181 XRRA1Q6P2D8 792 aa9.68□□□□□ -0.86
CHD3-202ENST00000358181 GPAT4Q86UL3 456 aa9.68□□□□□ -0.86
CHD3-202ENST00000358181 LRRC34Q8IZ02 419 aa9.68□□□□□ -0.86
CHD3-202ENST00000358181 STK40Q8N2I9 435 aa9.68□□□□□ -0.86
CHD3-202ENST00000358181 RIT2Q99578 217 aa9.68□□□□□ -0.86
CHD3-202ENST00000358181 YIPF4Q9BSR8 244 aa9.68□□□□□ -0.86
CHD3-202ENST00000358181 MALT1Q9UDY8 824 aa9.68□□□□□ -0.86
CHD3-202ENST00000358181 PCDHB10Q9UN67 800 aa9.68□□□□□ -0.86
CHD3-202ENST00000358181 NCOA3Q9Y6Q9 1424 aa9.68□□□□□ -0.86
CHD3-202ENST00000358181 CPNE3O75131 537 aaKnown RBP9.68□□□□□ -0.86
CHD3-202ENST00000358181 KDM4BO94953 1096 aa9.68□□□□□ -0.86
CHD3-202ENST00000358181 PLATP00750 562 aa9.68□□□□□ -0.86
CHD3-202ENST00000358181 RENP00797 406 aa9.68□□□□□ -0.86
CHD3-202ENST00000358181 MC4RP32245 332 aa9.68□□□□□ -0.86
CHD3-202ENST00000358181 ARHGAP40Q5TG30 622 aa9.68□□□□□ -0.86
CHD3-202ENST00000358181 IL23RQ5VWK5 629 aa9.68□□□□□ -0.86
CHD3-202ENST00000358181 TXNDC11Q6PKC3 985 aa9.68□□□□□ -0.86
CHD3-202ENST00000358181 IQCHQ86VS3 1027 aa9.68□□□□□ -0.86
CHD3-202ENST00000358181 PNLDC1Q8NA58 520 aaKnown RBP9.68□□□□□ -0.86
CHD3-202ENST00000358181 JPH3Q8WXH2 748 aaPredicted RBP9.68□□□□□ -0.86
CHD3-202ENST00000358181 LENG9Q96B70 501 aa9.68□□□□□ -0.86
CHD3-202ENST00000358181 ZC3H10Q96K80 434 aaKnown RBP9.68□□□□□ -0.86
CHD3-202ENST00000358181 CPNE1Q99829 537 aa9.68□□□□□ -0.86
CHD3-202ENST00000358181 SSX3Q99909 188 aa9.68□□□□□ -0.86
CHD3-202ENST00000358181 FEM1AQ9BSK4 669 aa9.68□□□□□ -0.86
CHD3-202ENST00000358181 TBL1XR1Q9BZK7 514 aa9.68□□□□□ -0.86
CHD3-202ENST00000358181 ULBP1Q9BZM6 244 aa9.68□□□□□ -0.86
CHD3-202ENST00000358181 ZNF355PQ9NSJ1 428 aa9.68□□□□□ -0.86
CHD3-202ENST00000358181 BTBD7Q9P203 1132 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms