RNA–Protein interactions for RNA: ENST00000358161.9

SPTAN1-201, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTAN1, Length 7,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-201ENST00000358161 ZMPSTE24O75844 475 aa10.24□□□□□ -0.77
SPTAN1-201ENST00000358161 SLC10A3P09131 477 aa10.24□□□□□ -0.77
SPTAN1-201ENST00000358161 NDUFS1P28331 727 aa10.24□□□□□ -0.77
SPTAN1-201ENST00000358161 TRAF3Q13114 568 aa10.24□□□□□ -0.77
SPTAN1-201ENST00000358161 ESRP1Q6NXG1 681 aaKnown RBP10.24□□□□□ -0.77
SPTAN1-201ENST00000358161 IRGCQ6NXR0 463 aa10.24□□□□□ -0.77
SPTAN1-201ENST00000358161 ZSCAN5AQ9BUG6 496 aa10.24□□□□□ -0.77
SPTAN1-201ENST00000358161 TDRD1Q9BXT4 1180 aaKnown RBP10.24□□□□□ -0.77
SPTAN1-201ENST00000358161 SPRTNQ9H040 489 aaPredicted RBP10.24□□□□□ -0.77
SPTAN1-201ENST00000358161 SIX2Q9NPC8 291 aa10.24□□□□□ -0.77
SPTAN1-201ENST00000358161 C10orf71Q711Q0 1435 aa10.24□□□□□ -0.77
SPTAN1-201ENST00000358161 TRBV23OR9-2A0A075B6M9 112 aa10.23□□□□□ -0.77
SPTAN1-201ENST00000358161 IRGMA1A4Y4 181 aa10.23□□□□□ -0.77
SPTAN1-201ENST00000358161 TIE1P35590 1138 aa10.23□□□□□ -0.77
SPTAN1-201ENST00000358161 NRF1Q16656 503 aa10.23□□□□□ -0.77
SPTAN1-201ENST00000358161 ARSIQ5FYB1 569 aa10.23□□□□□ -0.77
SPTAN1-201ENST00000358161 MZT2AQ6P582 158 aa10.23□□□□□ -0.77
SPTAN1-201ENST00000358161 LDB1Q86U70 411 aaPredicted RBP10.23□□□□□ -0.77
SPTAN1-201ENST00000358161 SAMD14Q8IZD0 417 aaPredicted RBP10.23□□□□□ -0.77
SPTAN1-201ENST00000358161 PIK3C3Q8NEB9 887 aa10.23□□□□□ -0.77
SPTAN1-201ENST00000358161 TTLQ8NG68 377 aa10.23□□□□□ -0.77
SPTAN1-201ENST00000358161 ZNF671Q8TAW3 534 aa10.23□□□□□ -0.77
SPTAN1-201ENST00000358161 WDR26Q9H7D7 661 aa10.23□□□□□ -0.77
SPTAN1-201ENST00000358161 MINDY3Q9H8M7 445 aa10.23□□□□□ -0.77
SPTAN1-201ENST00000358161 C8orf4Q9NR00 106 aa10.23□□□□□ -0.77
SPTAN1-201ENST00000358161 DDX18Q9NVP1 670 aaKnown RBP10.23□□□□□ -0.77
SPTAN1-201ENST00000358161 SCN2BO60939 215 aa10.23□□□□□ -0.77
SPTAN1-201ENST00000358161 HSPA7P48741 367 aa10.23□□□□□ -0.77
SPTAN1-201ENST00000358161 PRR5P85299 388 aa10.23□□□□□ -0.77
SPTAN1-201ENST00000358161 ZNF155Q12901 538 aaPredicted RBP10.23□□□□□ -0.77
SPTAN1-201ENST00000358161 C6orf62Q9GZU0 229 aaPredicted RBP10.23□□□□□ -0.77
SPTAN1-201ENST00000358161 SEC14L3Q9UDX4 400 aa10.23□□□□□ -0.77
SPTAN1-201ENST00000358161 EDF1O60869 148 aaKnown RBP10.23□□□□□ -0.77
SPTAN1-201ENST00000358161 CACNA2D1P54289 1103 aa10.23□□□□□ -0.77
SPTAN1-201ENST00000358161 ARMC4Q5T2S8 1044 aa10.23□□□□□ -0.77
SPTAN1-201ENST00000358161 FAM180AQ6UWF9 173 aa10.23□□□□□ -0.77
SPTAN1-201ENST00000358161 ARHGAP36Q6ZRI8 547 aa10.23□□□□□ -0.77
SPTAN1-201ENST00000358161 FAM129CQ86XR2 697 aa10.23□□□□□ -0.77
SPTAN1-201ENST00000358161 DENND6AQ8IWF6 608 aa10.23□□□□□ -0.77
SPTAN1-201ENST00000358161 AUTS2Q8WXX7 1259 aa10.23□□□□□ -0.77
SPTAN1-201ENST00000358161 RIT1Q92963 219 aa10.23□□□□□ -0.77
SPTAN1-201ENST00000358161 TSSK3Q96PN8 268 aa10.23□□□□□ -0.77
SPTAN1-201ENST00000358161 RHOBTB2Q9BYZ6 727 aa10.23□□□□□ -0.77
SPTAN1-201ENST00000358161 TDP1Q9NUW8 608 aa10.23□□□□□ -0.77
SPTAN1-201ENST00000358161 DNAJA2O60884 412 aa10.23□□□□□ -0.77
SPTAN1-201ENST00000358161 MATN4O95460 622 aa10.23□□□□□ -0.77
SPTAN1-201ENST00000358161 MPSTP25325 297 aa10.23□□□□□ -0.77
SPTAN1-201ENST00000358161 SLC11A1P49279 550 aa10.23□□□□□ -0.77
SPTAN1-201ENST00000358161 DGKEP52429 567 aa10.23□□□□□ -0.77
SPTAN1-201ENST00000358161 GPR17Q13304 367 aa10.23□□□□□ -0.77
SPTAN1-201ENST00000358161 HEPACAMQ14CZ8 416 aa10.23□□□□□ -0.77
SPTAN1-201ENST00000358161 C2orf27AQ580R0 203 aa10.23□□□□□ -0.77
SPTAN1-201ENST00000358161 TCEAL5Q5H9L2 206 aa10.23□□□□□ -0.77
SPTAN1-201ENST00000358161 BPIFB1Q8TDL5 484 aa10.23□□□□□ -0.77
SPTAN1-201ENST00000358161 HMGB4Q8WW32 186 aa10.23□□□□□ -0.77
SPTAN1-201ENST00000358161 EMID1Q96A84 441 aaPredicted RBP10.23□□□□□ -0.77
SPTAN1-201ENST00000358161 CNPPD1Q9BV87 410 aa10.23□□□□□ -0.77
SPTAN1-201ENST00000358161 RNF39Q9H2S5 420 aa10.23□□□□□ -0.77
SPTAN1-201ENST00000358161 TCRBV7S2A1N4TA0A589 114 aa10.23□□□□□ -0.77
SPTAN1-201ENST00000358161 UBXN7O94888 489 aa10.23□□□□□ -0.77
SPTAN1-201ENST00000358161 ANXA4P09525 319 aaPredicted RBP10.23□□□□□ -0.77
SPTAN1-201ENST00000358161 FSTL4Q6MZW2 842 aa10.23□□□□□ -0.77
SPTAN1-201ENST00000358161 SPESP1Q6UW49 350 aa10.23□□□□□ -0.77
SPTAN1-201ENST00000358161 ALYREFQ86V81 257 aaKnown RBP10.23□□□□□ -0.77
SPTAN1-201ENST00000358161 ST13P5Q8NFI4 369 aaPredicted RBP10.23□□□□□ -0.77
SPTAN1-201ENST00000358161 ZNF461Q8TAF7 563 aa10.23□□□□□ -0.77
SPTAN1-201ENST00000358161 RASSF5Q8WWW0 418 aa10.23□□□□□ -0.77
SPTAN1-201ENST00000358161 C12orf66Q96MD2 445 aa10.23□□□□□ -0.77
SPTAN1-201ENST00000358161 SSU72Q9NP77 194 aaKnown RBP10.23□□□□□ -0.77
SPTAN1-201ENST00000358161 MRPS30Q9NP92 439 aaKnown RBP10.23□□□□□ -0.77
SPTAN1-201ENST00000358161 EQTNQ9NQ60 294 aa10.23□□□□□ -0.77
SPTAN1-201ENST00000358161 INSL5Q9Y5Q6 135 aa10.23□□□□□ -0.77
SPTAN1-201ENST00000358161 ENO4A6NNW6 628 aa10.23□□□□□ -0.77
SPTAN1-201ENST00000358161 FAM155BO75949 473 aa10.23□□□□□ -0.77
SPTAN1-201ENST00000358161 DRD4P21917 467 aa10.23□□□□□ -0.77
SPTAN1-201ENST00000358161 RPS24P62847 133 aaKnown RBP10.23□□□□□ -0.77
SPTAN1-201ENST00000358161 TIGD2Q4W5G0 525 aa10.23□□□□□ -0.77
SPTAN1-201ENST00000358161 SPANXN2Q5MJ10 180 aa10.23□□□□□ -0.77
SPTAN1-201ENST00000358161 GCNT6Q5T4J0 391 aa10.23□□□□□ -0.77
SPTAN1-201ENST00000358161 ABRAXAS1Q6UWZ7 409 aa10.23□□□□□ -0.77
SPTAN1-201ENST00000358161 OR2T12Q8NG77 320 aa10.23□□□□□ -0.77
SPTAN1-201ENST00000358161 MIEF2Q96C03 454 aa10.23□□□□□ -0.77
SPTAN1-201ENST00000358161 ATG10Q9H0Y0 220 aa10.23□□□□□ -0.77
SPTAN1-201ENST00000358161 CREBZFQ9NS37 354 aa10.23□□□□□ -0.77
SPTAN1-201ENST00000358161 ERGIC3Q9Y282 383 aa10.23□□□□□ -0.77
SPTAN1-201ENST00000358161 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.22□□□□□ -0.77
SPTAN1-201ENST00000358161 MFN2O95140 757 aa10.22□□□□□ -0.77
SPTAN1-201ENST00000358161 TNFP01375 233 aa10.22□□□□□ -0.77
SPTAN1-201ENST00000358161 GNAZP19086 355 aa10.22□□□□□ -0.77
SPTAN1-201ENST00000358161 TTKP33981 857 aa10.22□□□□□ -0.77
SPTAN1-201ENST00000358161 MAGEA11P43364 429 aa10.22□□□□□ -0.77
SPTAN1-201ENST00000358161 LPIN1Q14693 890 aa10.22□□□□□ -0.77
SPTAN1-201ENST00000358161 NDUFAF6Q330K2 333 aa10.22□□□□□ -0.77
SPTAN1-201ENST00000358161 VPS26BQ4G0F5 336 aa10.22□□□□□ -0.77
SPTAN1-201ENST00000358161 FAM171BQ6P995 826 aa10.22□□□□□ -0.77
SPTAN1-201ENST00000358161 FAM92BQ6ZTR7 304 aa10.22□□□□□ -0.77
SPTAN1-201ENST00000358161 FBXW8Q8N3Y1 598 aa10.22□□□□□ -0.77
SPTAN1-201ENST00000358161 SIDT2Q8NBJ9 832 aaKnown RBP10.22□□□□□ -0.77
SPTAN1-201ENST00000358161 CCSER2Q9H7U1 834 aa10.22□□□□□ -0.77
SPTAN1-201ENST00000358161 PCDHGA11Q9Y5H2 935 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms