RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 POLR1BQ9H9Y6 1135 aa8.18□□□□□ -1.1
CD44-205ENST00000352818 KCNK13Q9HB14 408 aa8.18□□□□□ -1.1
CD44-205ENST00000352818 NPHS2Q9NP85 383 aa8.18□□□□□ -1.1
CD44-205ENST00000352818 ITM2CQ9NQX7 267 aa8.18□□□□□ -1.1
CD44-205ENST00000352818 SAR1AQ9NR31 198 aa8.18□□□□□ -1.1
CD44-205ENST00000352818 IARS2Q9NSE4 1012 aaKnown RBP8.18□□□□□ -1.1
CD44-205ENST00000352818 THAP1Q9NVV9 213 aa8.18□□□□□ -1.1
CD44-205ENST00000352818 IL1RAPL1Q9NZN1 696 aa8.18□□□□□ -1.1
CD44-205ENST00000352818 ARHGAP26Q9UNA1 814 aa8.18□□□□□ -1.1
CD44-205ENST00000352818 TBC1D30Q9Y2I9 924 aa8.18□□□□□ -1.1
CD44-205ENST00000352818 A0A096LPK6 155 aa8.17□□□□□ -1.1
CD44-205ENST00000352818 TBC1D3BA6NDS4 549 aa8.17□□□□□ -1.1
CD44-205ENST00000352818 MROH6A6NGR9 719 aa8.17□□□□□ -1.1
CD44-205ENST00000352818 TMEM114B3SHH9 223 aa8.17□□□□□ -1.1
CD44-205ENST00000352818 H0YHG0 523 aa8.17□□□□□ -1.1
CD44-205ENST00000352818 LEFTY2O00292 366 aa8.17□□□□□ -1.1
CD44-205ENST00000352818 GFRA2O00451 464 aa8.17□□□□□ -1.1
CD44-205ENST00000352818 SLC7A4O43246 635 aa8.17□□□□□ -1.1
CD44-205ENST00000352818 VAPBO95292 243 aa8.17□□□□□ -1.1
CD44-205ENST00000352818 IGLV3-19P01714 112 aa8.17□□□□□ -1.1
CD44-205ENST00000352818 CKMP06732 381 aa8.17□□□□□ -1.1
CD44-205ENST00000352818 PSMA3P25788 255 aa8.17□□□□□ -1.1
CD44-205ENST00000352818 ACVRL1P37023 503 aa8.17□□□□□ -1.1
CD44-205ENST00000352818 CASRP41180 1078 aa8.17□□□□□ -1.1
CD44-205ENST00000352818 GRIA4P48058 902 aa8.17□□□□□ -1.1
CD44-205ENST00000352818 CD151P48509 253 aa8.17□□□□□ -1.1
CD44-205ENST00000352818 TPMTP51580 245 aa8.17□□□□□ -1.1
CD44-205ENST00000352818 ARFIP2P53365 341 aa8.17□□□□□ -1.1
CD44-205ENST00000352818 STX3Q13277 289 aa8.17□□□□□ -1.1
CD44-205ENST00000352818 ILKQ13418 452 aa8.17□□□□□ -1.1
CD44-205ENST00000352818 THOC5Q13769 683 aaKnown RBP8.17□□□□□ -1.1
CD44-205ENST00000352818 POU6F1Q14863 301 aa8.17□□□□□ -1.1
CD44-205ENST00000352818 CHI3L2Q15782 390 aa8.17□□□□□ -1.1
CD44-205ENST00000352818 TBR1Q16650 682 aa8.17□□□□□ -1.1
CD44-205ENST00000352818 FASTKD1Q53R41 847 aaKnown RBP8.17□□□□□ -1.1
CD44-205ENST00000352818 RALGPS1Q5JS13 557 aa8.17□□□□□ -1.1
CD44-205ENST00000352818 ADGRF1Q5T601 910 aa8.17□□□□□ -1.1
CD44-205ENST00000352818 C1QL3Q5VWW1 255 aa8.17□□□□□ -1.1
CD44-205ENST00000352818 ESRP1Q6NXG1 681 aaKnown RBP8.17□□□□□ -1.1
CD44-205ENST00000352818 IGF2-ASQ6U949 168 aa8.17□□□□□ -1.1
CD44-205ENST00000352818 Q6ZNB5 142 aa8.17□□□□□ -1.1
CD44-205ENST00000352818 CIR1Q86X95 450 aaPredicted RBP8.17□□□□□ -1.1
CD44-205ENST00000352818 CRLF3Q8IUI8 442 aa8.17□□□□□ -1.1
CD44-205ENST00000352818 LSMEM2Q8N112 164 aa8.17□□□□□ -1.1
CD44-205ENST00000352818 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.17□□□□□ -1.1
CD44-205ENST00000352818 RFWD2Q8NHY2 731 aa8.17□□□□□ -1.1
CD44-205ENST00000352818 SREK1Q8WXA9 508 aaKnown RBP8.17□□□□□ -1.1
CD44-205ENST00000352818 INPP5DQ92835 1189 aa8.17□□□□□ -1.1
CD44-205ENST00000352818 MIB2Q96AX9 1013 aa8.17□□□□□ -1.1
CD44-205ENST00000352818 ERP27Q96DN0 273 aa8.17□□□□□ -1.1
CD44-205ENST00000352818 ZNF778Q96MU6 729 aa8.17□□□□□ -1.1
CD44-205ENST00000352818 PSKH2Q96QS6 385 aa8.17□□□□□ -1.1
CD44-205ENST00000352818 MECRQ9BV79 373 aa8.17□□□□□ -1.1
CD44-205ENST00000352818 TMEM120AQ9BXJ8 343 aa8.17□□□□□ -1.1
CD44-205ENST00000352818 ACE2Q9BYF1 805 aaPredicted RBP8.17□□□□□ -1.1
CD44-205ENST00000352818 NACA2Q9H009 215 aa8.17□□□□□ -1.1
CD44-205ENST00000352818 WWP1Q9H0M0 922 aa8.17□□□□□ -1.1
CD44-205ENST00000352818 LRMDAQ9H2I8 198 aa8.17□□□□□ -1.1
CD44-205ENST00000352818 C6orf106Q9H6K1 298 aaPredicted RBP8.17□□□□□ -1.1
CD44-205ENST00000352818 SLC40A1Q9NP59 571 aa8.17□□□□□ -1.1
CD44-205ENST00000352818 GEMIN8Q9NWZ8 242 aaKnown RBP8.17□□□□□ -1.1
CD44-205ENST00000352818 COPG2Q9UBF2 871 aa8.17□□□□□ -1.1
CD44-205ENST00000352818 UBA2Q9UBT2 640 aaPredicted RBP8.17□□□□□ -1.1
CD44-205ENST00000352818 LNPEPQ9UIQ6 1025 aa8.17□□□□□ -1.1
CD44-205ENST00000352818 GGT7Q9UJ14 662 aa8.17□□□□□ -1.1
CD44-205ENST00000352818 AGO1Q9UL18 857 aaKnown RBP8.17□□□□□ -1.1
CD44-205ENST00000352818 CORO1CQ9ULV4 474 aaPredicted RBP8.17□□□□□ -1.1
CD44-205ENST00000352818 ANKRD36A6QL64 1941 aa8.17□□□□□ -1.1
CD44-205ENST00000352818 A0A087X1B8 175 aa8.16□□□□□ -1.1
CD44-205ENST00000352818 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.16□□□□□ -1.1
CD44-205ENST00000352818 TRAV19A0A0A6YYK7 116 aa8.16□□□□□ -1.1
CD44-205ENST00000352818 CXorf51AA0A1B0GTR3 108 aa8.16□□□□□ -1.1
CD44-205ENST00000352818 TRAFD1O14545 582 aaPredicted RBP8.16□□□□□ -1.1
CD44-205ENST00000352818 TULP3O75386 442 aa8.16□□□□□ -1.1
CD44-205ENST00000352818 SNUPNO95149 360 aaKnown RBP8.16□□□□□ -1.1
CD44-205ENST00000352818 KLKB1P03952 638 aa8.16□□□□□ -1.1
CD44-205ENST00000352818 C2P06681 752 aa8.16□□□□□ -1.1
CD44-205ENST00000352818 RHOCP08134 193 aa8.16□□□□□ -1.1
CD44-205ENST00000352818 ADH5P11766 374 aa8.16□□□□□ -1.1
CD44-205ENST00000352818 CPA3P15088 417 aa8.16□□□□□ -1.1
CD44-205ENST00000352818 ALOX15P16050 662 aaPredicted RBP8.16□□□□□ -1.1
CD44-205ENST00000352818 GABRB3P28472 473 aa8.16□□□□□ -1.1
CD44-205ENST00000352818 CRABP2P29373 138 aa8.16□□□□□ -1.1
CD44-205ENST00000352818 SLC1A2P43004 574 aa8.16□□□□□ -1.1
CD44-205ENST00000352818 CHRNA4P43681 627 aa8.16□□□□□ -1.1
CD44-205ENST00000352818 CD97P48960 835 aa8.16□□□□□ -1.1
CD44-205ENST00000352818 KPNA2P52292 529 aaKnown RBP8.16□□□□□ -1.1
CD44-205ENST00000352818 HK2P52789 917 aa8.16□□□□□ -1.1
CD44-205ENST00000352818 OXCT1P55809 520 aa8.16□□□□□ -1.1
CD44-205ENST00000352818 RAB10P61026 200 aa8.16□□□□□ -1.1
CD44-205ENST00000352818 MAXP61244 160 aa8.16□□□□□ -1.1
CD44-205ENST00000352818 POU4F1Q01851 419 aa8.16□□□□□ -1.1
CD44-205ENST00000352818 ITKQ08881 620 aa8.16□□□□□ -1.1
CD44-205ENST00000352818 OVGP1Q12889 678 aa8.16□□□□□ -1.1
CD44-205ENST00000352818 ZNF177Q13360 481 aaPredicted RBP8.16□□□□□ -1.1
CD44-205ENST00000352818 SLC12A1Q13621 1099 aa8.16□□□□□ -1.1
CD44-205ENST00000352818 SEPT6Q14141 434 aa8.16□□□□□ -1.1
CD44-205ENST00000352818 IHHQ14623 411 aa8.16□□□□□ -1.1
CD44-205ENST00000352818 GRM3Q14832 879 aa8.16□□□□□ -1.1
CD44-205ENST00000352818 KRT72Q14CN4 511 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms