RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 YIPF1Q9Y548 306 aa21.88■■□□□ 1.09
UPF3A-201ENST00000351487 OR51B4Q9Y5P0 310 aa21.88■■□□□ 1.09
UPF3A-201ENST00000351487 MICAL3Q7RTP6 2002 aa21.88■■□□□ 1.09
UPF3A-201ENST00000351487 MYOCOSA0A1B0GUC4 107 aa21.87■■□□□ 1.09
UPF3A-201ENST00000351487 SOCS2O14508 198 aa21.87■■□□□ 1.09
UPF3A-201ENST00000351487 PRMT5O14744 637 aaPredicted RBP21.87■■□□□ 1.09
UPF3A-201ENST00000351487 VILLO15195 856 aa21.87■■□□□ 1.09
UPF3A-201ENST00000351487 GPIP06744 558 aa21.87■■□□□ 1.09
UPF3A-201ENST00000351487 ATP6V1B1P15313 513 aa21.87■■□□□ 1.09
UPF3A-201ENST00000351487 IL10P22301 178 aa21.87■■□□□ 1.09
UPF3A-201ENST00000351487 RHOAP61586 193 aa21.87■■□□□ 1.09
UPF3A-201ENST00000351487 UFM1P61960 85 aa21.87■■□□□ 1.09
UPF3A-201ENST00000351487 PLD1Q13393 1074 aa21.87■■□□□ 1.09
UPF3A-201ENST00000351487 DYNC1I2Q13409 638 aaKnown RBP21.87■■□□□ 1.09
UPF3A-201ENST00000351487 C6orf136Q5SQH8 315 aa21.87■■□□□ 1.09
UPF3A-201ENST00000351487 BORAQ6PGQ7 559 aa21.87■■□□□ 1.09
UPF3A-201ENST00000351487 MYO1HQ8N1T3 1032 aa21.87■■□□□ 1.09
UPF3A-201ENST00000351487 MFSD2AQ8NA29 543 aa21.87■■□□□ 1.09
UPF3A-201ENST00000351487 EID2BQ96D98 161 aa21.87■■□□□ 1.09
UPF3A-201ENST00000351487 FEM1AQ9BSK4 669 aa21.87■■□□□ 1.09
UPF3A-201ENST00000351487 AURKCQ9UQB9 309 aa21.87■■□□□ 1.09
UPF3A-201ENST00000351487 PCDHB9Q9Y5E1 797 aa21.87■■□□□ 1.09
UPF3A-201ENST00000351487 FAM234BA2RU67 622 aa21.87■■□□□ 1.09
UPF3A-201ENST00000351487 GRXCR2A6NFK2 248 aa21.87■■□□□ 1.09
UPF3A-201ENST00000351487 CCDC154A6NI56 674 aa21.87■■□□□ 1.09
UPF3A-201ENST00000351487 H0Y626 953 aa21.87■■□□□ 1.09
UPF3A-201ENST00000351487 BAIAP3O94812 1187 aa21.87■■□□□ 1.09
UPF3A-201ENST00000351487 PPP3CCP48454 512 aa21.87■■□□□ 1.09
UPF3A-201ENST00000351487 GSK3BP49841 420 aa21.87■■□□□ 1.09
UPF3A-201ENST00000351487 APLP1P51693 650 aa21.87■■□□□ 1.09
UPF3A-201ENST00000351487 POLR2JP52435 117 aaKnown RBP21.87■■□□□ 1.09
UPF3A-201ENST00000351487 PAGE3Q5JUK9 113 aa21.87■■□□□ 1.09
UPF3A-201ENST00000351487 RBM44Q6ZP01 1051 aaKnown RBP21.87■■□□□ 1.09
UPF3A-201ENST00000351487 ADAMTSL2Q86TH1 951 aa21.87■■□□□ 1.09
UPF3A-201ENST00000351487 OR52B6Q8NGF0 335 aa21.87■■□□□ 1.09
UPF3A-201ENST00000351487 TMEM79Q9BSE2 394 aa21.87■■□□□ 1.09
UPF3A-201ENST00000351487 PNPLA3Q9NST1 481 aa21.87■■□□□ 1.09
UPF3A-201ENST00000351487 PTTG2Q9NZH5 202 aa21.87■■□□□ 1.09
UPF3A-201ENST00000351487 DNMT3BQ9UBC3 853 aaKnown RBP21.87■■□□□ 1.09
UPF3A-201ENST00000351487 TNPO3Q9Y5L0 923 aaKnown RBP21.87■■□□□ 1.09
UPF3A-201ENST00000351487 SLC30A1Q9Y6M5 507 aa21.87■■□□□ 1.09
UPF3A-201ENST00000351487 ZFC3H1O60293 1989 aaKnown RBP21.87■■□□□ 1.09
UPF3A-201ENST00000351487 A0A0U1RQS6 177 aa21.86■■□□□ 1.09
UPF3A-201ENST00000351487 GOLGA8CPA6NN73 597 aa21.86■■□□□ 1.09
UPF3A-201ENST00000351487 GPR39O43194 453 aa21.86■■□□□ 1.09
UPF3A-201ENST00000351487 TBL1XO60907 577 aa21.86■■□□□ 1.09
UPF3A-201ENST00000351487 NPPAP01160 153 aa21.86■■□□□ 1.09
UPF3A-201ENST00000351487 EEFSECP57772 596 aaKnown RBP21.86■■□□□ 1.09
UPF3A-201ENST00000351487 ERVPABLB-1P60509 514 aa21.86■■□□□ 1.09
UPF3A-201ENST00000351487 TPGS2Q68CL5 300 aa21.86■■□□□ 1.09
UPF3A-201ENST00000351487 LETMD1Q6P1Q0 360 aa21.86■■□□□ 1.09
UPF3A-201ENST00000351487 SCIMPQ6UWF3 145 aa21.86■■□□□ 1.09
UPF3A-201ENST00000351487 SBSNQ6UWP8 590 aa21.86■■□□□ 1.09
UPF3A-201ENST00000351487 CARNMT1Q8N4J0 409 aa21.86■■□□□ 1.09
UPF3A-201ENST00000351487 CDYL2Q8N8U2 506 aa21.86■■□□□ 1.09
UPF3A-201ENST00000351487 GRIN3AQ8TCU5 1115 aa21.86■■□□□ 1.09
UPF3A-201ENST00000351487 IGSF21Q96ID5 467 aa21.86■■□□□ 1.09
UPF3A-201ENST00000351487 SARS2Q9NP81 518 aaKnown RBP21.86■■□□□ 1.09
UPF3A-201ENST00000351487 HEBP1Q9NRV9 189 aa21.86■■□□□ 1.09
UPF3A-201ENST00000351487 SUN2Q9UH99 717 aa21.86■■□□□ 1.09
UPF3A-201ENST00000351487 VPS51Q9UID3 782 aa21.86■■□□□ 1.09
UPF3A-201ENST00000351487 DYTNA2CJ06 578 aa21.86■■□□□ 1.09
UPF3A-201ENST00000351487 IQCF5A8MTL0 148 aa21.86■■□□□ 1.09
UPF3A-201ENST00000351487 H6PDO95479 791 aa21.86■■□□□ 1.09
UPF3A-201ENST00000351487 PRAMEF12O95522 483 aa21.86■■□□□ 1.09
UPF3A-201ENST00000351487 CALRP27797 417 aaKnown RBP21.86■■□□□ 1.09
UPF3A-201ENST00000351487 AP1S1P61966 158 aa21.86■■□□□ 1.09
UPF3A-201ENST00000351487 FXNQ16595 210 aa21.86■■□□□ 1.09
UPF3A-201ENST00000351487 ATP6AP1LQ52LC2 224 aa21.86■■□□□ 1.09
UPF3A-201ENST00000351487 RABL3Q5HYI8 236 aa21.86■■□□□ 1.09
UPF3A-201ENST00000351487 KIAA1841Q6NSI8 718 aa21.86■■□□□ 1.09
UPF3A-201ENST00000351487 Q6ZSR9 355 aa21.86■■□□□ 1.09
UPF3A-201ENST00000351487 LYSMD3Q7Z3D4 306 aa21.86■■□□□ 1.09
UPF3A-201ENST00000351487 EPHX4Q8IUS5 362 aa21.86■■□□□ 1.09
UPF3A-201ENST00000351487 KIAA2013Q8IYS2 634 aa21.86■■□□□ 1.09
UPF3A-201ENST00000351487 CHCHD4Q8N4Q1 142 aa21.86■■□□□ 1.09
UPF3A-201ENST00000351487 HJURPQ8NCD3 748 aaPredicted RBP21.86■■□□□ 1.09
UPF3A-201ENST00000351487 C19orf43Q9BQ61 176 aa21.86■■□□□ 1.09
UPF3A-201ENST00000351487 C1orf50Q9BV19 199 aa21.86■■□□□ 1.09
UPF3A-201ENST00000351487 GPR63Q9BZJ6 419 aa21.86■■□□□ 1.09
UPF3A-201ENST00000351487 DMTF1Q9Y222 760 aa21.86■■□□□ 1.09
UPF3A-201ENST00000351487 FCF1Q9Y324 198 aaKnown RBP21.86■■□□□ 1.09
UPF3A-201ENST00000351487 KIAA1671Q9BY89 1806 aa21.85■■□□□ 1.09
UPF3A-201ENST00000351487 OBSL1O75147 1896 aa21.85■■□□□ 1.09
UPF3A-201ENST00000351487 GFRA2O00451 464 aa21.85■■□□□ 1.09
UPF3A-201ENST00000351487 PGLSO95336 258 aa21.85■■□□□ 1.09
UPF3A-201ENST00000351487 RPS3P23396 243 aaKnown RBP eCLIP21.85■■□□□ 1.09
UPF3A-201ENST00000351487 FASP25445 335 aa21.85■■□□□ 1.09
UPF3A-201ENST00000351487 OXTRP30559 389 aa21.85■■□□□ 1.09
UPF3A-201ENST00000351487 MYLK3Q32MK0 819 aa21.85■■□□□ 1.09
UPF3A-201ENST00000351487 CAMK1DQ8IU85 385 aa21.85■■□□□ 1.09
UPF3A-201ENST00000351487 DCAF4L2Q8NA75 395 aa21.85■■□□□ 1.09
UPF3A-201ENST00000351487 FNDC5Q8NAU1 212 aa21.85■■□□□ 1.09
UPF3A-201ENST00000351487 DNAJB14Q8TBM8 379 aa21.85■■□□□ 1.09
UPF3A-201ENST00000351487 PROKR1Q8TCW9 393 aa21.85■■□□□ 1.09
UPF3A-201ENST00000351487 TFAP2CQ92754 450 aa21.85■■□□□ 1.09
UPF3A-201ENST00000351487 ALG14Q96F25 216 aa21.85■■□□□ 1.09
UPF3A-201ENST00000351487 MYO19Q96H55 970 aa21.85■■□□□ 1.09
UPF3A-201ENST00000351487 TCRBV5S2A0A599 114 aa21.84■■□□□ 1.09
UPF3A-201ENST00000351487 SYNCRIPO60506 623 aaKnown RBP21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms