RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 VPS35Q96QK1 796 aa7.12□□□□□ -1.27
VCAN-202ENST00000342785 LRRC3Q9BY71 257 aa7.12□□□□□ -1.27
VCAN-202ENST00000342785 FAM83DQ9H4H8 585 aa7.12□□□□□ -1.27
VCAN-202ENST00000342785 CCNB1IP1Q9NPC3 277 aa7.12□□□□□ -1.27
VCAN-202ENST00000342785 KLHL20Q9Y2M5 609 aa7.12□□□□□ -1.27
VCAN-202ENST00000342785 Q9Y3F1 56 aa7.12□□□□□ -1.27
VCAN-202ENST00000342785 SNNO75324 88 aaPredicted RBP7.11□□□□□ -1.27
VCAN-202ENST00000342785 IL1BP01584 269 aa7.11□□□□□ -1.27
VCAN-202ENST00000342785 TRBC1P01850 177 aa7.11□□□□□ -1.27
VCAN-202ENST00000342785 HMGCS1Q01581 520 aa7.11□□□□□ -1.27
VCAN-202ENST00000342785 MRPL28Q13084 256 aaKnown RBP7.11□□□□□ -1.27
VCAN-202ENST00000342785 CHIT1Q13231 466 aa7.11□□□□□ -1.27
VCAN-202ENST00000342785 INAQ16352 499 aa7.11□□□□□ -1.27
VCAN-202ENST00000342785 ALFQ53S48 1182 aa7.11□□□□□ -1.27
VCAN-202ENST00000342785 CPTPQ5TA50 214 aa7.11□□□□□ -1.27
VCAN-202ENST00000342785 TRIM48Q8IWZ4 208 aa7.11□□□□□ -1.27
VCAN-202ENST00000342785 NPWQ8N729 165 aa7.11□□□□□ -1.27
VCAN-202ENST00000342785 TRPV3Q8NET8 790 aa7.11□□□□□ -1.27
VCAN-202ENST00000342785 PNPT1Q8TCS8 783 aaKnown RBP7.11□□□□□ -1.27
VCAN-202ENST00000342785 SUSD6Q92537 303 aa7.11□□□□□ -1.27
VCAN-202ENST00000342785 LRRC58Q96CX6 371 aa7.11□□□□□ -1.27
VCAN-202ENST00000342785 ERLEC1Q96DZ1 483 aa7.11□□□□□ -1.27
VCAN-202ENST00000342785 RPL10LQ96L21 214 aaKnown RBP7.11□□□□□ -1.27
VCAN-202ENST00000342785 ZNF599Q96NL3 588 aa7.11□□□□□ -1.27
VCAN-202ENST00000342785 QRFPRQ96P65 431 aa7.11□□□□□ -1.27
VCAN-202ENST00000342785 C1orf109Q9NX04 203 aa7.11□□□□□ -1.27
VCAN-202ENST00000342785 ZCWPW2A0A1B0GU75 182 aa7.11□□□□□ -1.27
VCAN-202ENST00000342785 SLC38A8A6NNN8 435 aa7.11□□□□□ -1.27
VCAN-202ENST00000342785 FAM189A1O60320 539 aa7.11□□□□□ -1.27
VCAN-202ENST00000342785 KERAO60938 352 aa7.11□□□□□ -1.27
VCAN-202ENST00000342785 COL6A1P12109 1028 aa7.11□□□□□ -1.27
VCAN-202ENST00000342785 PPIBP23284 216 aaKnown RBP7.11□□□□□ -1.27
VCAN-202ENST00000342785 CDK9P50750 372 aaKnown RBP7.11□□□□□ -1.27
VCAN-202ENST00000342785 PSMD7P51665 324 aa7.11□□□□□ -1.27
VCAN-202ENST00000342785 CDH15P55291 814 aa7.11□□□□□ -1.27
VCAN-202ENST00000342785 SULT2A1Q06520 285 aa7.11□□□□□ -1.27
VCAN-202ENST00000342785 MERTKQ12866 999 aa7.11□□□□□ -1.27
VCAN-202ENST00000342785 RABL3Q5HYI8 236 aa7.11□□□□□ -1.27
VCAN-202ENST00000342785 MTSS1LQ765P7 747 aa7.11□□□□□ -1.27
VCAN-202ENST00000342785 DSG4Q86SJ6 1040 aa7.11□□□□□ -1.27
VCAN-202ENST00000342785 CLDN19Q8N6F1 224 aa7.11□□□□□ -1.27
VCAN-202ENST00000342785 ZNF483Q8TF39 744 aaPredicted RBP7.11□□□□□ -1.27
VCAN-202ENST00000342785 CENPIQ92674 756 aaPredicted RBP7.11□□□□□ -1.27
VCAN-202ENST00000342785 BORCS5Q969J3 196 aa7.11□□□□□ -1.27
VCAN-202ENST00000342785 NACC2Q96BF6 587 aa7.11□□□□□ -1.27
VCAN-202ENST00000342785 CDK15Q96Q40 435 aa7.11□□□□□ -1.27
VCAN-202ENST00000342785 EPB41L1Q9H4G0 881 aa7.11□□□□□ -1.27
VCAN-202ENST00000342785 POLR3BQ9NW08 1133 aaPredicted RBP7.11□□□□□ -1.27
VCAN-202ENST00000342785 MIOSQ9NXC5 875 aa7.11□□□□□ -1.27
VCAN-202ENST00000342785 DPP7Q9UHL4 492 aa7.11□□□□□ -1.27
VCAN-202ENST00000342785 FAM234BA2RU67 622 aa7.11□□□□□ -1.27
VCAN-202ENST00000342785 TBC1D3BA6NDS4 549 aa7.11□□□□□ -1.27
VCAN-202ENST00000342785 SLC9A3R1O14745 358 aaPredicted RBP7.11□□□□□ -1.27
VCAN-202ENST00000342785 ARPC2O15144 300 aa7.11□□□□□ -1.27
VCAN-202ENST00000342785 TULP3O75386 442 aa7.11□□□□□ -1.27
VCAN-202ENST00000342785 CAPN15O75808 1086 aa7.11□□□□□ -1.27
VCAN-202ENST00000342785 KRT75O95678 551 aa7.11□□□□□ -1.27
VCAN-202ENST00000342785 ADH1AP07327 375 aa7.11□□□□□ -1.27
VCAN-202ENST00000342785 HOXB6P17509 224 aaKnown RBP7.11□□□□□ -1.27
VCAN-202ENST00000342785 GPR1P46091 355 aa7.11□□□□□ -1.27
VCAN-202ENST00000342785 STC1P52823 247 aa7.11□□□□□ -1.27
VCAN-202ENST00000342785 EEFSECP57772 596 aaKnown RBP7.11□□□□□ -1.27
VCAN-202ENST00000342785 ECT2LQ008S8 904 aa7.11□□□□□ -1.27
VCAN-202ENST00000342785 SCAPQ12770 1279 aa7.11□□□□□ -1.27
VCAN-202ENST00000342785 TNFAIP8L3Q5GJ75 292 aa7.11□□□□□ -1.27
VCAN-202ENST00000342785 CCNYL2Q5T2Q4 361 aa7.11□□□□□ -1.27
VCAN-202ENST00000342785 ADGRF1Q5T601 910 aa7.11□□□□□ -1.27
VCAN-202ENST00000342785 KRT73Q86Y46 540 aa7.11□□□□□ -1.27
VCAN-202ENST00000342785 PDSS2Q86YH6 399 aa7.11□□□□□ -1.27
VCAN-202ENST00000342785 FBXO22Q8NEZ5 403 aa7.11□□□□□ -1.27
VCAN-202ENST00000342785 ZFYVE19Q96K21 471 aa7.11□□□□□ -1.27
VCAN-202ENST00000342785 SMAD5Q99717 465 aaKnown RBP7.11□□□□□ -1.27
VCAN-202ENST00000342785 AARSD1Q9BTE6 412 aaKnown RBP7.11□□□□□ -1.27
VCAN-202ENST00000342785 HIPK3Q9H422 1215 aa7.11□□□□□ -1.27
VCAN-202ENST00000342785 NOL6Q9H6R4 1146 aaKnown RBP7.11□□□□□ -1.27
VCAN-202ENST00000342785 TIMMDC1Q9NPL8 285 aa7.11□□□□□ -1.27
VCAN-202ENST00000342785 RAD18Q9NS91 495 aa7.11□□□□□ -1.27
VCAN-202ENST00000342785 ENPP3O14638 875 aa7.11□□□□□ -1.27
VCAN-202ENST00000342785 EPORP19235 508 aa7.11□□□□□ -1.27
VCAN-202ENST00000342785 CAPGP40121 348 aa7.11□□□□□ -1.27
VCAN-202ENST00000342785 SEMG2Q02383 582 aa7.11□□□□□ -1.27
VCAN-202ENST00000342785 MPPE1Q53F39 396 aa7.11□□□□□ -1.27
VCAN-202ENST00000342785 MS4A13Q5J8X5 152 aa7.11□□□□□ -1.27
VCAN-202ENST00000342785 RAET1GQ6H3X3 334 aa7.11□□□□□ -1.27
VCAN-202ENST00000342785 KRT78Q8N1N4 520 aa7.11□□□□□ -1.27
VCAN-202ENST00000342785 C2CD4AQ8NCU7 369 aaPredicted RBP7.11□□□□□ -1.27
VCAN-202ENST00000342785 SMG8Q8ND04 991 aaKnown RBP7.11□□□□□ -1.27
VCAN-202ENST00000342785 TIFAQ96CG3 184 aa7.11□□□□□ -1.27
VCAN-202ENST00000342785 C8orf48Q96LL4 319 aa7.11□□□□□ -1.27
VCAN-202ENST00000342785 TMEM209Q96SK2 561 aa7.11□□□□□ -1.27
VCAN-202ENST00000342785 DHRS4Q9BTZ2 278 aa7.11□□□□□ -1.27
VCAN-202ENST00000342785 SUCOQ9UBS9 1254 aaKnown RBP7.11□□□□□ -1.27
VCAN-202ENST00000342785 ASF1AQ9Y294 204 aa7.11□□□□□ -1.27
VCAN-202ENST00000342785 ADAMTSL3P82987 1691 aa7.11□□□□□ -1.27
VCAN-202ENST00000342785 PAPSS2O95340 614 aaPredicted RBP7.11□□□□□ -1.27
VCAN-202ENST00000342785 ANGPTL1O95841 491 aa7.11□□□□□ -1.27
VCAN-202ENST00000342785 DGKQP52824 942 aa7.11□□□□□ -1.27
VCAN-202ENST00000342785 ACLYP53396 1101 aa7.11□□□□□ -1.27
VCAN-202ENST00000342785 DIO3P55073 304 aa7.11□□□□□ -1.27
VCAN-202ENST00000342785 TRIM40Q6P9F5 258 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms