RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 PACSIN1Q9BY11 444 aa15.37■□□□□ 0.05
LINC01116-202ENST00000339037 GPR63Q9BZJ6 419 aa15.37■□□□□ 0.05
LINC01116-202ENST00000339037 CTTNBP2NLQ9P2B4 639 aa15.37■□□□□ 0.05
LINC01116-202ENST00000339037 VPS9D1Q9Y2B5 631 aa15.37■□□□□ 0.05
LINC01116-202ENST00000339037 MAN2B2Q9Y2E5 1009 aa15.37■□□□□ 0.05
LINC01116-202ENST00000339037 ZNF711Q9Y462 761 aa15.37■□□□□ 0.05
LINC01116-202ENST00000339037 OR52A4PA6NMU1 304 aa15.36■□□□□ 0.05
LINC01116-202ENST00000339037 KIF1CO43896 1103 aaKnown RBP15.36■□□□□ 0.05
LINC01116-202ENST00000339037 VEGFDO43915 354 aa15.36■□□□□ 0.05
LINC01116-202ENST00000339037 MTX2O75431 263 aa15.36■□□□□ 0.05
LINC01116-202ENST00000339037 RFPL1O75677 317 aa15.36■□□□□ 0.05
LINC01116-202ENST00000339037 FURINP09958 794 aa15.36■□□□□ 0.05
LINC01116-202ENST00000339037 CCNYL3P0C7X3 344 aa15.36■□□□□ 0.05
LINC01116-202ENST00000339037 BRAFP15056 766 aa15.36■□□□□ 0.05
LINC01116-202ENST00000339037 TAS2R40P59535 323 aa15.36■□□□□ 0.05
LINC01116-202ENST00000339037 GPR18Q14330 331 aa15.36■□□□□ 0.05
LINC01116-202ENST00000339037 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.36■□□□□ 0.05
LINC01116-202ENST00000339037 CACHD1Q5VU97 1274 aa15.36■□□□□ 0.05
LINC01116-202ENST00000339037 IRGCQ6NXR0 463 aa15.36■□□□□ 0.05
LINC01116-202ENST00000339037 CYB5D1Q6P9G0 228 aa15.36■□□□□ 0.05
LINC01116-202ENST00000339037 ABRAXAS1Q6UWZ7 409 aa15.36■□□□□ 0.05
LINC01116-202ENST00000339037 FAM92BQ6ZTR7 304 aa15.36■□□□□ 0.05
LINC01116-202ENST00000339037 ASB18Q6ZVZ8 466 aa15.36■□□□□ 0.05
LINC01116-202ENST00000339037 PPP1R3BQ86XI6 285 aa15.36■□□□□ 0.05
LINC01116-202ENST00000339037 ZNF547Q8IVP9 402 aa15.36■□□□□ 0.05
LINC01116-202ENST00000339037 RBM12BQ8IXT5 1001 aaKnown RBP15.36■□□□□ 0.05
LINC01116-202ENST00000339037 CXorf40BQ96DE9 158 aa15.36■□□□□ 0.05
LINC01116-202ENST00000339037 CEP41Q9BYV8 373 aa15.36■□□□□ 0.05
LINC01116-202ENST00000339037 BRD8Q9H0E9 1235 aa15.36■□□□□ 0.05
LINC01116-202ENST00000339037 MAGEE1Q9HCI5 957 aa15.36■□□□□ 0.05
LINC01116-202ENST00000339037 SLC40A1Q9NP59 571 aa15.36■□□□□ 0.05
LINC01116-202ENST00000339037 UVRAGQ9P2Y5 699 aa15.36■□□□□ 0.05
LINC01116-202ENST00000339037 HEY1Q9Y5J3 304 aa15.36■□□□□ 0.05
LINC01116-202ENST00000339037 PIPSLA2A3N6 862 aa15.35■□□□□ 0.05
LINC01116-202ENST00000339037 CDC14CA4D256 554 aa15.35■□□□□ 0.05
LINC01116-202ENST00000339037 GOLGA6L3A6NEY3 463 aa15.35■□□□□ 0.05
LINC01116-202ENST00000339037 K7EM74 188 aa15.35■□□□□ 0.05
LINC01116-202ENST00000339037 MTSS1O43312 755 aa15.35■□□□□ 0.05
LINC01116-202ENST00000339037 CDK14O94921 469 aa15.35■□□□□ 0.05
LINC01116-202ENST00000339037 FGF5P12034 268 aa15.35■□□□□ 0.05
LINC01116-202ENST00000339037 VCLP18206 1134 aa15.35■□□□□ 0.05
LINC01116-202ENST00000339037 IDSP22304 550 aa15.35■□□□□ 0.05
LINC01116-202ENST00000339037 HNRNPH3P31942 346 aaKnown RBP15.35■□□□□ 0.05
LINC01116-202ENST00000339037 PMS2P54278 862 aa15.35■□□□□ 0.05
LINC01116-202ENST00000339037 DRG2P55039 364 aaKnown RBP15.35■□□□□ 0.05
LINC01116-202ENST00000339037 AP1B1Q10567 949 aa15.35■□□□□ 0.05
LINC01116-202ENST00000339037 PCSK7Q16549 785 aa15.35■□□□□ 0.05
LINC01116-202ENST00000339037 AGAP9Q5VTM2 703 aa15.35■□□□□ 0.05
LINC01116-202ENST00000339037 WASH2PQ6VEQ5 465 aa15.35■□□□□ 0.05
LINC01116-202ENST00000339037 TMC3Q7Z5M5 1100 aa15.35■□□□□ 0.05
LINC01116-202ENST00000339037 NT5DC3Q86UY8 548 aa15.35■□□□□ 0.05
LINC01116-202ENST00000339037 TRAPPC5Q8IUR0 188 aa15.35■□□□□ 0.05
LINC01116-202ENST00000339037 PLD5Q8N7P1 536 aa15.35■□□□□ 0.05
LINC01116-202ENST00000339037 KLHL6Q8WZ60 621 aa15.35■□□□□ 0.05
LINC01116-202ENST00000339037 RAPGEF5Q92565 580 aa15.35■□□□□ 0.05
LINC01116-202ENST00000339037 IMP4Q96G21 291 aaKnown RBP15.35■□□□□ 0.05
LINC01116-202ENST00000339037 AGAP3Q96P47 875 aa15.35■□□□□ 0.05
LINC01116-202ENST00000339037 RNF157Q96PX1 679 aa15.35■□□□□ 0.05
LINC01116-202ENST00000339037 TWSG1Q9GZX9 223 aa15.35■□□□□ 0.05
LINC01116-202ENST00000339037 WASH6PQ9NQA3 447 aa15.35■□□□□ 0.05
LINC01116-202ENST00000339037 LCMT1Q9UIC8 334 aa15.35■□□□□ 0.05
LINC01116-202ENST00000339037 PADI1Q9ULC6 663 aa15.35■□□□□ 0.05
LINC01116-202ENST00000339037 PCDHGA6Q9Y5G7 932 aa15.35■□□□□ 0.05
LINC01116-202ENST00000339037 SPAG6O75602 509 aa15.34■□□□□ 0.05
LINC01116-202ENST00000339037 CREG1O75629 220 aa15.34■□□□□ 0.05
LINC01116-202ENST00000339037 MT-ND3P03897 115 aa15.34■□□□□ 0.05
LINC01116-202ENST00000339037 BPIP17213 487 aa15.34■□□□□ 0.05
LINC01116-202ENST00000339037 NELFEP18615 380 aaKnown RBP15.34■□□□□ 0.05
LINC01116-202ENST00000339037 CD97P48960 835 aa15.34■□□□□ 0.05
LINC01116-202ENST00000339037 MLLT10P55197 1068 aa15.34■□□□□ 0.05
LINC01116-202ENST00000339037 CDK18Q07002 472 aa15.34■□□□□ 0.05
LINC01116-202ENST00000339037 DNASE1L3Q13609 305 aa15.34■□□□□ 0.05
LINC01116-202ENST00000339037 SLC18A3Q16572 532 aa15.34■□□□□ 0.05
LINC01116-202ENST00000339037 KHDC1Q4VXA5 237 aaKnown RBP15.34■□□□□ 0.05
LINC01116-202ENST00000339037 TMEM135Q86UB9 458 aa15.34■□□□□ 0.05
LINC01116-202ENST00000339037 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.34■□□□□ 0.05
LINC01116-202ENST00000339037 CTNNBL1Q8WYA6 563 aaPredicted RBP15.34■□□□□ 0.05
LINC01116-202ENST00000339037 PSMG3-AS1Q96PY0 264 aa15.34■□□□□ 0.05
LINC01116-202ENST00000339037 VPS35Q96QK1 796 aa15.34■□□□□ 0.05
LINC01116-202ENST00000339037 SLC25A51Q9H1U9 297 aa15.34■□□□□ 0.05
LINC01116-202ENST00000339037 PDE7BQ9NP56 450 aa15.34■□□□□ 0.05
LINC01116-202ENST00000339037 TRIM10Q9UDY6 481 aa15.34■□□□□ 0.05
LINC01116-202ENST00000339037 EPHA6Q9UF33 1036 aa15.34■□□□□ 0.05
LINC01116-202ENST00000339037 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.34■□□□□ 0.05
LINC01116-202ENST00000339037 LRRD1A4D1F6 860 aa15.33■□□□□ 0.04
LINC01116-202ENST00000339037 C21orf140B9A014 251 aa15.33■□□□□ 0.04
LINC01116-202ENST00000339037 RECKO95980 971 aa15.33■□□□□ 0.04
LINC01116-202ENST00000339037 H2AFZP0C0S5 128 aa15.33■□□□□ 0.04
LINC01116-202ENST00000339037 PTMSP20962 102 aa15.33■□□□□ 0.04
LINC01116-202ENST00000339037 KDELR1P24390 212 aa15.33■□□□□ 0.04
LINC01116-202ENST00000339037 HALP42357 657 aa15.33■□□□□ 0.04
LINC01116-202ENST00000339037 TUBB3Q13509 450 aa15.33■□□□□ 0.04
LINC01116-202ENST00000339037 GTF2H3Q13889 308 aa15.33■□□□□ 0.04
LINC01116-202ENST00000339037 PDK1Q15118 436 aa15.33■□□□□ 0.04
LINC01116-202ENST00000339037 ASTE1Q2TB18 679 aaPredicted RBP15.33■□□□□ 0.04
LINC01116-202ENST00000339037 FAM182AQ5T1J6 154 aa15.33■□□□□ 0.04
LINC01116-202ENST00000339037 CCDC70Q6NSX1 233 aa15.33■□□□□ 0.04
LINC01116-202ENST00000339037 H2AFVQ71UI9 128 aa15.33■□□□□ 0.04
LINC01116-202ENST00000339037 C11orf96Q7Z7L8 435 aa15.33■□□□□ 0.04
LINC01116-202ENST00000339037 GDAP1Q8TB36 358 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms