RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 COX4I2Q96KJ9 171 aa13.62□□□□□ -0.23
RTN4-202ENST00000337526 SUCOQ9UBS9 1254 aaKnown RBP13.62□□□□□ -0.23
RTN4-202ENST00000337526 WBP11Q9Y2W2 641 aaKnown RBP13.62□□□□□ -0.23
RTN4-202ENST00000337526 MFHAS1Q9Y4C4 1052 aa13.62□□□□□ -0.23
RTN4-202ENST00000337526 ARL5CA6NH57 179 aa13.62□□□□□ -0.23
RTN4-202ENST00000337526 FABP3P05413 133 aa13.62□□□□□ -0.23
RTN4-202ENST00000337526 MAPKAPK2P49137 400 aa13.62□□□□□ -0.23
RTN4-202ENST00000337526 MTTPP55157 894 aa13.62□□□□□ -0.23
RTN4-202ENST00000337526 SLC25A11Q02978 314 aaKnown RBP13.62□□□□□ -0.23
RTN4-202ENST00000337526 ZNHIT3Q15649 155 aaPredicted RBP13.62□□□□□ -0.23
RTN4-202ENST00000337526 FAM174BQ3ZCQ3 159 aa13.62□□□□□ -0.23
RTN4-202ENST00000337526 FRMD7Q6ZUT3 714 aa13.62□□□□□ -0.23
RTN4-202ENST00000337526 KCTD8Q6ZWB6 473 aa13.62□□□□□ -0.23
RTN4-202ENST00000337526 C17orf64Q86WR6 236 aa13.62□□□□□ -0.23
RTN4-202ENST00000337526 SNED1Q8TER0 1413 aa13.62□□□□□ -0.23
RTN4-202ENST00000337526 XAGE5Q8WWM1 108 aa13.62□□□□□ -0.23
RTN4-202ENST00000337526 PIGVQ9NUD9 493 aa13.62□□□□□ -0.23
RTN4-202ENST00000337526 SEC14L3Q9UDX4 400 aa13.62□□□□□ -0.23
RTN4-202ENST00000337526 N6AMT1Q9Y5N5 214 aa13.62□□□□□ -0.23
RTN4-202ENST00000337526 ISM1B1AKI9 464 aa13.62□□□□□ -0.23
RTN4-202ENST00000337526 BTBD19C9JJ37 291 aa13.62□□□□□ -0.23
RTN4-202ENST00000337526 TNFRSF11BO00300 401 aa13.62□□□□□ -0.23
RTN4-202ENST00000337526 ASLP04424 464 aa13.62□□□□□ -0.23
RTN4-202ENST00000337526 ADH1AP07327 375 aa13.62□□□□□ -0.23
RTN4-202ENST00000337526 ANXA4P09525 319 aaPredicted RBP13.62□□□□□ -0.23
RTN4-202ENST00000337526 ITGAXP20702 1163 aa13.62□□□□□ -0.23
RTN4-202ENST00000337526 PSMA1P25786 263 aaKnown RBP13.62□□□□□ -0.23
RTN4-202ENST00000337526 FLT3LGP49771 235 aa13.62□□□□□ -0.23
RTN4-202ENST00000337526 NDUFA5Q16718 116 aa13.62□□□□□ -0.23
RTN4-202ENST00000337526 ANO7Q6IWH7 933 aa13.62□□□□□ -0.23
RTN4-202ENST00000337526 PLET1Q6UQ28 207 aa13.62□□□□□ -0.23
RTN4-202ENST00000337526 P2RY8Q86VZ1 359 aa13.62□□□□□ -0.23
RTN4-202ENST00000337526 OR52J3Q8NH60 311 aa13.62□□□□□ -0.23
RTN4-202ENST00000337526 SCAMP5Q8TAC9 235 aa13.62□□□□□ -0.23
RTN4-202ENST00000337526 CANT1Q8WVQ1 401 aa13.62□□□□□ -0.23
RTN4-202ENST00000337526 UPF1Q92900 1129 aaKnown RBP eCLIP13.62□□□□□ -0.238e-30■■□□□ 13.3
RTN4-202ENST00000337526 NUSAP1Q9BXS6 441 aaKnown RBP13.62□□□□□ -0.23
RTN4-202ENST00000337526 INTS7Q9NVH2 962 aaKnown RBP13.62□□□□□ -0.23
RTN4-202ENST00000337526 MYH10P35580 1976 aa13.61□□□□□ -0.23
RTN4-202ENST00000337526 PLK4O00444 970 aa13.61□□□□□ -0.23
RTN4-202ENST00000337526 NDUFB5O43674 189 aa13.61□□□□□ -0.23
RTN4-202ENST00000337526 ENO2P09104 434 aaPredicted RBP13.61□□□□□ -0.23
RTN4-202ENST00000337526 SMPD1P17405 629 aa13.61□□□□□ -0.23
RTN4-202ENST00000337526 OGNP20774 298 aaKnown RBP13.61□□□□□ -0.23
RTN4-202ENST00000337526 PTGER3P43115 390 aa13.61□□□□□ -0.23
RTN4-202ENST00000337526 SSR2P43308 183 aa13.61□□□□□ -0.23
RTN4-202ENST00000337526 PTPN5P54829 565 aa13.61□□□□□ -0.23
RTN4-202ENST00000337526 KLF1Q13351 362 aaPredicted RBP13.61□□□□□ -0.23
RTN4-202ENST00000337526 CRYBG2Q8N1P7 616 aa13.61□□□□□ -0.23
RTN4-202ENST00000337526 C12orf42Q96LP6 360 aa13.61□□□□□ -0.23
RTN4-202ENST00000337526 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.61□□□□□ -0.23
RTN4-202ENST00000337526 CLDN25C9JDP6 229 aa13.61□□□□□ -0.23
RTN4-202ENST00000337526 EI24O14681 340 aa13.61□□□□□ -0.23
RTN4-202ENST00000337526 PLEKHG4Q58EX7 1191 aa13.61□□□□□ -0.23
RTN4-202ENST00000337526 CLEC20AQ6ZU45 233 aa13.61□□□□□ -0.23
RTN4-202ENST00000337526 RNF44Q7L0R7 432 aa13.61□□□□□ -0.23
RTN4-202ENST00000337526 COMMD2Q86X83 199 aa13.61□□□□□ -0.23
RTN4-202ENST00000337526 ZNF655Q8N720 491 aaPredicted RBP13.61□□□□□ -0.23
RTN4-202ENST00000337526 MCMBPQ9BTE3 642 aa13.61□□□□□ -0.23
RTN4-202ENST00000337526 CNTN3Q9P232 1028 aa13.61□□□□□ -0.23
RTN4-202ENST00000337526 AQP12BA6NM10 295 aa13.61□□□□□ -0.23
RTN4-202ENST00000337526 FGBP02675 491 aa13.61□□□□□ -0.23
RTN4-202ENST00000337526 AOC1P19801 751 aa13.61□□□□□ -0.23
RTN4-202ENST00000337526 RPL4P36578 427 aaKnown RBP13.61□□□□□ -0.23
RTN4-202ENST00000337526 SCNN1AP37088 669 aa13.61□□□□□ -0.23
RTN4-202ENST00000337526 CDH4P55283 916 aa13.61□□□□□ -0.23
RTN4-202ENST00000337526 MTPNP58546 118 aa13.61□□□□□ -0.23
RTN4-202ENST00000337526 CHIT1Q13231 466 aa13.61□□□□□ -0.23
RTN4-202ENST00000337526 AQP12AQ8IXF9 295 aa13.61□□□□□ -0.23
RTN4-202ENST00000337526 GPR65Q8IYL9 337 aa13.61□□□□□ -0.23
RTN4-202ENST00000337526 VANGL1Q8TAA9 524 aaPredicted RBP13.61□□□□□ -0.23
RTN4-202ENST00000337526 SLC13A3Q8WWT9 602 aa13.61□□□□□ -0.23
RTN4-202ENST00000337526 ASB9Q96DX5 294 aa13.61□□□□□ -0.23
RTN4-202ENST00000337526 FEM1AQ9BSK4 669 aa13.61□□□□□ -0.23
RTN4-202ENST00000337526 MINDY3Q9H8M7 445 aa13.61□□□□□ -0.23
RTN4-202ENST00000337526 CFAP97Q9P2B7 532 aa13.61□□□□□ -0.23
RTN4-202ENST00000337526 TMA7Q9Y2S6 64 aaKnown RBP13.61□□□□□ -0.23
RTN4-202ENST00000337526 ATRNL1Q5VV63 1379 aa13.61□□□□□ -0.23
RTN4-202ENST00000337526 DLG5Q8TDM6 1919 aa13.61□□□□□ -0.23
RTN4-202ENST00000337526 E7ENX8 843 aa13.6□□□□□ -0.23
RTN4-202ENST00000337526 GABRDO14764 452 aa13.6□□□□□ -0.23
RTN4-202ENST00000337526 CASKO14936 926 aa13.6□□□□□ -0.23
RTN4-202ENST00000337526 PGRMC2O15173 223 aa13.6□□□□□ -0.23
RTN4-202ENST00000337526 TP73O15350 636 aa13.6□□□□□ -0.23
RTN4-202ENST00000337526 HLA-DQA2P01906 255 aa13.6□□□□□ -0.23
RTN4-202ENST00000337526 IMPDH1P20839 514 aa13.6□□□□□ -0.23
RTN4-202ENST00000337526 C2orf80Q0P641 193 aa13.6□□□□□ -0.23
RTN4-202ENST00000337526 AKAP14Q86UN6 197 aa13.6□□□□□ -0.23
RTN4-202ENST00000337526 SERPINA9Q86WD7 417 aa13.6□□□□□ -0.23
RTN4-202ENST00000337526 LRRC17Q8N6Y2 441 aa13.6□□□□□ -0.23
RTN4-202ENST00000337526 TCF25Q9BQ70 676 aa13.6□□□□□ -0.23
RTN4-202ENST00000337526 EURLQ9NYK6 297 aa13.6□□□□□ -0.23
RTN4-202ENST00000337526 CCDC162PA2VCL2 907 aa13.6□□□□□ -0.23
RTN4-202ENST00000337526 FAM47E-STBD1D6RA91 191 aa13.6□□□□□ -0.23
RTN4-202ENST00000337526 STX16-NPEPL1H3BU86 382 aa13.6□□□□□ -0.23
RTN4-202ENST00000337526 PLOD3O60568 738 aa13.6□□□□□ -0.23
RTN4-202ENST00000337526 SIX3O95343 332 aaPredicted RBP13.6□□□□□ -0.23
RTN4-202ENST00000337526 PRPS2P11908 318 aa13.6□□□□□ -0.23
RTN4-202ENST00000337526 CCNFP41002 786 aa13.6□□□□□ -0.23
RTN4-202ENST00000337526 CCNIQ14094 377 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms