RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 RABGGTBP53611 331 aa13.13□□□□□ -0.31
COL2A1-201ENST00000337299 TIGD7Q6NT04 549 aaPredicted RBP13.13□□□□□ -0.31
COL2A1-201ENST00000337299 RASSF6Q6ZTQ3 369 aa13.13□□□□□ -0.31
COL2A1-201ENST00000337299 EPHX4Q8IUS5 362 aa13.13□□□□□ -0.31
COL2A1-201ENST00000337299 SLC15A3Q8IY34 581 aa13.13□□□□□ -0.31
COL2A1-201ENST00000337299 LZTR1Q8N653 840 aa13.13□□□□□ -0.31
COL2A1-201ENST00000337299 COPS5Q92905 334 aa13.13□□□□□ -0.31
COL2A1-201ENST00000337299 DHRS4Q9BTZ2 278 aa13.13□□□□□ -0.31
COL2A1-201ENST00000337299 PDGFCQ9NRA1 345 aa13.13□□□□□ -0.31
COL2A1-201ENST00000337299 DNAJB9Q9UBS3 223 aa13.13□□□□□ -0.31
COL2A1-201ENST00000337299 CLEC4AQ9UMR7 237 aa13.13□□□□□ -0.31
COL2A1-201ENST00000337299 MAGED1Q9Y5V3 778 aaPredicted RBP13.13□□□□□ -0.31
COL2A1-201ENST00000337299 IFRD1O00458 451 aaPredicted RBP13.13□□□□□ -0.31
COL2A1-201ENST00000337299 ZNF197O14709 1029 aa13.13□□□□□ -0.31
COL2A1-201ENST00000337299 RPLP0P05388 317 aaKnown RBP13.13□□□□□ -0.31
COL2A1-201ENST00000337299 ARSAP15289 507 aa13.13□□□□□ -0.31
COL2A1-201ENST00000337299 GPD2P43304 727 aa13.13□□□□□ -0.31
COL2A1-201ENST00000337299 AKIRIN2Q53H80 203 aa13.13□□□□□ -0.31
COL2A1-201ENST00000337299 RBM20Q5T481 1227 aaKnown RBP13.13□□□□□ -0.31
COL2A1-201ENST00000337299 DESI1Q6ICB0 168 aa13.13□□□□□ -0.31
COL2A1-201ENST00000337299 ZDHHC21Q8IVQ6 265 aa13.13□□□□□ -0.31
COL2A1-201ENST00000337299 HS6ST3Q8IZP7 471 aa13.13□□□□□ -0.31
COL2A1-201ENST00000337299 CADM2Q8N3J6 435 aa13.13□□□□□ -0.31
COL2A1-201ENST00000337299 NDNFQ8TB73 568 aa13.13□□□□□ -0.31
COL2A1-201ENST00000337299 ZNF778Q96MU6 729 aa13.13□□□□□ -0.31
COL2A1-201ENST00000337299 PPP1R2P1Q96PQ5 205 aa13.13□□□□□ -0.31
COL2A1-201ENST00000337299 ASB7Q9H672 318 aa13.13□□□□□ -0.31
COL2A1-201ENST00000337299 AASSQ9UDR5 926 aa13.13□□□□□ -0.31
COL2A1-201ENST00000337299 MYO10Q9HD67 2058 aa13.12□□□□□ -0.31
COL2A1-201ENST00000337299 PRR23AA6NEV1 266 aa13.12□□□□□ -0.31
COL2A1-201ENST00000337299 TCAF2A6NFQ2 919 aa13.12□□□□□ -0.31
COL2A1-201ENST00000337299 BHMG1C9JSJ3 638 aaPredicted RBP13.12□□□□□ -0.31
COL2A1-201ENST00000337299 MDM4O15151 490 aa13.12□□□□□ -0.31
COL2A1-201ENST00000337299 OR4F21O95013 312 aa13.12□□□□□ -0.31
COL2A1-201ENST00000337299 IL1BP01584 269 aa13.12□□□□□ -0.31
COL2A1-201ENST00000337299 C8BP07358 591 aa13.12□□□□□ -0.31
COL2A1-201ENST00000337299 PRKAR1AP10644 381 aa13.12□□□□□ -0.31
COL2A1-201ENST00000337299 MYL12AP19105 171 aa13.12□□□□□ -0.31
COL2A1-201ENST00000337299 L1CAMP32004 1257 aa13.12□□□□□ -0.31
COL2A1-201ENST00000337299 SPCS2Q15005 226 aa13.12□□□□□ -0.31
COL2A1-201ENST00000337299 C5orf22Q49AR2 442 aa13.12□□□□□ -0.31
COL2A1-201ENST00000337299 STXBP5Q5T5C0 1151 aa13.12□□□□□ -0.31
COL2A1-201ENST00000337299 OVOS1Q6IE37 1185 aa13.12□□□□□ -0.31
COL2A1-201ENST00000337299 CCSAPQ6IQ19 270 aaPredicted RBP13.12□□□□□ -0.31
COL2A1-201ENST00000337299 BHLHB9Q6PI77 547 aa13.12□□□□□ -0.31
COL2A1-201ENST00000337299 C11orf88Q6PI97 169 aa13.12□□□□□ -0.31
COL2A1-201ENST00000337299 LYSMD3Q7Z3D4 306 aa13.12□□□□□ -0.31
COL2A1-201ENST00000337299 ZC3HC1Q86WB0 502 aaKnown RBP13.12□□□□□ -0.31
COL2A1-201ENST00000337299 SPATA2LQ8IUW3 424 aaPredicted RBP13.12□□□□□ -0.31
COL2A1-201ENST00000337299 KIAA0319LQ8IZA0 1049 aa13.12□□□□□ -0.31
COL2A1-201ENST00000337299 PNPLA1Q8N8W4 532 aa13.12□□□□□ -0.31
COL2A1-201ENST00000337299 LILRB4Q8NHJ6 448 aa13.12□□□□□ -0.31
COL2A1-201ENST00000337299 MSANTD3Q96H12 275 aa13.12□□□□□ -0.31
COL2A1-201ENST00000337299 FCRL3Q96P31 734 aaPredicted RBP13.12□□□□□ -0.31
COL2A1-201ENST00000337299 EMILIN2Q9BXX0 1053 aa13.12□□□□□ -0.31
COL2A1-201ENST00000337299 GPBP1L1Q9HC44 474 aaPredicted RBP13.12□□□□□ -0.31
COL2A1-201ENST00000337299 GMIPQ9P107 970 aa13.12□□□□□ -0.31
COL2A1-201ENST00000337299 CRLS1Q9UJA2 301 aa13.12□□□□□ -0.31
COL2A1-201ENST00000337299 SSR3Q9UNL2 185 aa13.12□□□□□ -0.31
COL2A1-201ENST00000337299 IGKV6D-41A0A0C4DH26 115 aa13.12□□□□□ -0.31
COL2A1-201ENST00000337299 TEX28O15482 410 aa13.12□□□□□ -0.31
COL2A1-201ENST00000337299 RGS14O43566 566 aa13.12□□□□□ -0.31
COL2A1-201ENST00000337299 EDIL3O43854 480 aa13.12□□□□□ -0.31
COL2A1-201ENST00000337299 CYP11A1P05108 521 aa13.12□□□□□ -0.31
COL2A1-201ENST00000337299 ZNF26P17031 533 aaPredicted RBP13.12□□□□□ -0.31
COL2A1-201ENST00000337299 HOXD11P31277 338 aaPredicted RBP13.12□□□□□ -0.31
COL2A1-201ENST00000337299 CDC42P60953 191 aa13.12□□□□□ -0.31
COL2A1-201ENST00000337299 IL18Q14116 193 aa13.12□□□□□ -0.31
COL2A1-201ENST00000337299 CADM3Q8N126 398 aa13.12□□□□□ -0.31
COL2A1-201ENST00000337299 GPC2Q8N158 579 aa13.12□□□□□ -0.31
COL2A1-201ENST00000337299 CDCA5Q96FF9 252 aa13.12□□□□□ -0.31
COL2A1-201ENST00000337299 FEM1CQ96JP0 617 aa13.12□□□□□ -0.31
COL2A1-201ENST00000337299 ADAMTS10Q9H324 1103 aa13.12□□□□□ -0.31
COL2A1-201ENST00000337299 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.12□□□□□ -0.31
COL2A1-201ENST00000337299 TULP3O75386 442 aa13.12□□□□□ -0.31
COL2A1-201ENST00000337299 ZNF286BP0CG31 522 aa13.12□□□□□ -0.31
COL2A1-201ENST00000337299 FKBP1AP62942 108 aaKnown RBP13.12□□□□□ -0.31
COL2A1-201ENST00000337299 LGALS3BPQ08380 585 aa13.12□□□□□ -0.31
COL2A1-201ENST00000337299 SNAPC1Q16533 368 aa13.12□□□□□ -0.31
COL2A1-201ENST00000337299 DPY19L2P1Q6NXN4 242 aa13.12□□□□□ -0.31
COL2A1-201ENST00000337299 LCLAT1Q6UWP7 414 aa13.12□□□□□ -0.31
COL2A1-201ENST00000337299 LGI2Q8N0V4 545 aa13.12□□□□□ -0.31
COL2A1-201ENST00000337299 FAM45AQ8TCE6 357 aa13.12□□□□□ -0.31
COL2A1-201ENST00000337299 SPPL2BQ8TCT7 592 aa13.12□□□□□ -0.31
COL2A1-201ENST00000337299 TDRD1Q9BXT4 1180 aaKnown RBP13.12□□□□□ -0.31
COL2A1-201ENST00000337299 LRRC3Q9BY71 257 aa13.12□□□□□ -0.31
COL2A1-201ENST00000337299 EMCNQ9ULC0 261 aa13.12□□□□□ -0.31
COL2A1-201ENST00000337299 A0A1B0GW55 424 aa13.11□□□□□ -0.31
COL2A1-201ENST00000337299 MGAT4DA6NG13 374 aa13.11□□□□□ -0.31
COL2A1-201ENST00000337299 OR51F1A6NGY5 319 aa13.11□□□□□ -0.31
COL2A1-201ENST00000337299 RASAL1O95294 804 aa13.11□□□□□ -0.31
COL2A1-201ENST00000337299 C9P02748 559 aa13.11□□□□□ -0.31
COL2A1-201ENST00000337299 DUX4L2P0CJ85 424 aa13.11□□□□□ -0.31
COL2A1-201ENST00000337299 DUX4L3P0CJ86 424 aa13.11□□□□□ -0.31
COL2A1-201ENST00000337299 DUX4L4P0CJ87 422 aa13.11□□□□□ -0.31
COL2A1-201ENST00000337299 DUX4L5P0CJ88 424 aa13.11□□□□□ -0.31
COL2A1-201ENST00000337299 DUX4L6P0CJ89 424 aa13.11□□□□□ -0.31
COL2A1-201ENST00000337299 DUX4L7P0CJ90 424 aa13.11□□□□□ -0.31
COL2A1-201ENST00000337299 OXTRP30559 389 aa13.11□□□□□ -0.31
COL2A1-201ENST00000337299 CHI3L1P36222 383 aaPredicted RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms