RNA–Protein interactions for RNA: ENST00000336916.8

FN1-202, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,435 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-202ENST00000336916 BTBD19C9JJ37 291 aa12.16□□□□□ -0.46
FN1-202ENST00000336916 SPTBP11277 2137 aa12.16□□□□□ -0.46
FN1-202ENST00000336916 CLCN7P51798 805 aa12.16□□□□□ -0.46
FN1-202ENST00000336916 NEDD8Q15843 81 aa12.16□□□□□ -0.46
FN1-202ENST00000336916 FAM91A1Q658Y4 838 aa12.16□□□□□ -0.46
FN1-202ENST00000336916 SPOCK2Q92563 424 aa12.16□□□□□ -0.46
FN1-202ENST00000336916 SNX27Q96L92 541 aa12.16□□□□□ -0.46
FN1-202ENST00000336916 TMEM138Q9NPI0 162 aa12.16□□□□□ -0.46
FN1-202ENST00000336916 PRORSD1PA6NEY8 169 aa12.16□□□□□ -0.46
FN1-202ENST00000336916 SNHG28P0DPA3 235 aa12.16□□□□□ -0.46
FN1-202ENST00000336916 ALOX12P18054 663 aa12.16□□□□□ -0.46
FN1-202ENST00000336916 CCKBRP32239 447 aa12.16□□□□□ -0.46
FN1-202ENST00000336916 RGS8P57771 180 aaPredicted RBP12.16□□□□□ -0.46
FN1-202ENST00000336916 CPSF6Q16630 551 aaKnown RBP eCLIP12.16□□□□□ -0.46
FN1-202ENST00000336916 HKDC1Q2TB90 917 aa12.16□□□□□ -0.46
FN1-202ENST00000336916 BNIPLQ7Z465 357 aa12.16□□□□□ -0.46
FN1-202ENST00000336916 RBM23Q86U06 439 aaKnown RBP12.16□□□□□ -0.46
FN1-202ENST00000336916 CELF5Q8N6W0 485 aaKnown RBP12.16□□□□□ -0.46
FN1-202ENST00000336916 PIH1D2Q8WWB5 315 aa12.16□□□□□ -0.46
FN1-202ENST00000336916 P2RY11Q96G91 374 aa12.16□□□□□ -0.46
FN1-202ENST00000336916 GLS2Q9UI32 602 aa12.16□□□□□ -0.46
FN1-202ENST00000336916 CDH7Q9ULB5 785 aa12.16□□□□□ -0.46
FN1-202ENST00000336916 SALL3Q9BXA9 1300 aa12.16□□□□□ -0.46
FN1-202ENST00000336916 EDDM13A0A1B0GTR0 161 aa12.16□□□□□ -0.46
FN1-202ENST00000336916 LYPLA1O75608 230 aaPredicted RBP12.16□□□□□ -0.46
FN1-202ENST00000336916 NOL4O94818 638 aa12.16□□□□□ -0.46
FN1-202ENST00000336916 COX4I1P13073 169 aa12.16□□□□□ -0.46
FN1-202ENST00000336916 TACR2P21452 398 aa12.16□□□□□ -0.46
FN1-202ENST00000336916 DNAJB1P25685 340 aa12.16□□□□□ -0.46
FN1-202ENST00000336916 MAPK14Q16539 360 aa12.16□□□□□ -0.46
FN1-202ENST00000336916 GPR33Q49SQ1 333 aa12.16□□□□□ -0.46
FN1-202ENST00000336916 TIGD5Q53EQ6 642 aa12.16□□□□□ -0.46
FN1-202ENST00000336916 TREML2Q5T2D2 321 aa12.16□□□□□ -0.46
FN1-202ENST00000336916 THOC7Q6I9Y2 204 aaKnown RBP12.16□□□□□ -0.46
FN1-202ENST00000336916 PIGXQ8TBF5 258 aa12.16□□□□□ -0.46
FN1-202ENST00000336916 CXorf56Q9H5V9 222 aa12.16□□□□□ -0.46
FN1-202ENST00000336916 NEUROD4Q9HD90 331 aa12.16□□□□□ -0.46
FN1-202ENST00000336916 STXBP5LQ9Y2K9 1186 aa12.16□□□□□ -0.46
FN1-202ENST00000336916 CRYBG1Q9Y4K1 1723 aa12.15□□□□□ -0.46
FN1-202ENST00000336916 ERAL1O75616 437 aaKnown RBP12.15□□□□□ -0.46
FN1-202ENST00000336916 PRAMEF1O95521 474 aa12.15□□□□□ -0.46
FN1-202ENST00000336916 PRDX6P30041 224 aa12.15□□□□□ -0.46
FN1-202ENST00000336916 SNTA1Q13424 505 aa12.15□□□□□ -0.46
FN1-202ENST00000336916 QSOX2Q6ZRP7 698 aa12.15□□□□□ -0.46
FN1-202ENST00000336916 CNTD1Q8N815 330 aa12.15□□□□□ -0.46
FN1-202ENST00000336916 ROPN1LQ96C74 230 aa12.15□□□□□ -0.46
FN1-202ENST00000336916 CAB39LQ9H9S4 337 aa12.15□□□□□ -0.46
FN1-202ENST00000336916 OR2AG2A6NM03 316 aa12.15□□□□□ -0.46
FN1-202ENST00000336916 LOC110117498-PIK3R3F6TDL0 507 aa12.15□□□□□ -0.46
FN1-202ENST00000336916 USP12O75317 370 aa12.15□□□□□ -0.46
FN1-202ENST00000336916 CDH3P22223 829 aa12.15□□□□□ -0.46
FN1-202ENST00000336916 ZNF33AQ06730 810 aa12.15□□□□□ -0.46
FN1-202ENST00000336916 FNBP1LQ5T0N5 605 aa12.15□□□□□ -0.46
FN1-202ENST00000336916 TMC5Q6UXY8 1006 aa12.15□□□□□ -0.46
FN1-202ENST00000336916 PIK3R3Q92569 461 aa12.15□□□□□ -0.46
FN1-202ENST00000336916 PCDHGB2Q9Y5G2 931 aa12.15□□□□□ -0.46
FN1-202ENST00000336916 ZNF208O43345 1280 aa12.15□□□□□ -0.46
FN1-202ENST00000336916 SSNA1O43805 119 aa12.15□□□□□ -0.46
FN1-202ENST00000336916 ARL2P36404 184 aa12.15□□□□□ -0.46
FN1-202ENST00000336916 HNRNPDQ14103 355 aaKnown RBP12.15□□□□□ -0.46
FN1-202ENST00000336916 SPIN4Q56A73 249 aa12.15□□□□□ -0.46
FN1-202ENST00000336916 AAGABQ6PD74 315 aa12.15□□□□□ -0.46
FN1-202ENST00000336916 NR4A3Q92570 626 aa12.15□□□□□ -0.46
FN1-202ENST00000336916 HNRNPABQ99729 332 aaKnown RBP12.15□□□□□ -0.46
FN1-202ENST00000336916 DDX18Q9NVP1 670 aaKnown RBP12.15□□□□□ -0.46
FN1-202ENST00000336916 FFAR3O14843 346 aa12.15□□□□□ -0.46
FN1-202ENST00000336916 GPR42O15529 346 aa12.15□□□□□ -0.46
FN1-202ENST00000336916 SERPINA3P01011 423 aa12.15□□□□□ -0.46
FN1-202ENST00000336916 PSME3P61289 254 aa12.15□□□□□ -0.46
FN1-202ENST00000336916 IRGCQ6NXR0 463 aa12.15□□□□□ -0.46
FN1-202ENST00000336916 UNQ6126/PRO20091Q6UXV3 157 aa12.15□□□□□ -0.46
FN1-202ENST00000336916 UBASH3BQ8TF42 649 aa12.15□□□□□ -0.46
FN1-202ENST00000336916 MIPEPQ99797 713 aa12.15□□□□□ -0.46
FN1-202ENST00000336916 H0YGN5 161 aa12.15□□□□□ -0.46
FN1-202ENST00000336916 LIN7AO14910 233 aaPredicted RBP12.15□□□□□ -0.46
FN1-202ENST00000336916 COQ9O75208 318 aa12.15□□□□□ -0.46
FN1-202ENST00000336916 KLHL18O94889 574 aa12.15□□□□□ -0.46
FN1-202ENST00000336916 GRB14Q14449 540 aa12.15□□□□□ -0.46
FN1-202ENST00000336916 ZNF540Q8NDQ6 660 aa12.15□□□□□ -0.46
FN1-202ENST00000336916 C17orf62Q9BQA9 187 aa12.15□□□□□ -0.46
FN1-202ENST00000336916 CCDC28BQ9BUN5 200 aa12.15□□□□□ -0.46
FN1-202ENST00000336916 SRMSQ9H3Y6 488 aa12.15□□□□□ -0.46
FN1-202ENST00000336916 SLC2A4RGQ9NR83 387 aa12.15□□□□□ -0.46
FN1-202ENST00000336916 TCRBV9S1A1TA0A576 114 aa12.15□□□□□ -0.47
FN1-202ENST00000336916 PEX12O00623 359 aa12.15□□□□□ -0.47
FN1-202ENST00000336916 ADRB2P07550 413 aa12.15□□□□□ -0.47
FN1-202ENST00000336916 ZCCHC18P0CG32 403 aa12.15□□□□□ -0.47
FN1-202ENST00000336916 GRK6P43250 576 aa12.15□□□□□ -0.47
FN1-202ENST00000336916 SPATS1Q496A3 300 aa12.15□□□□□ -0.47
FN1-202ENST00000336916 TNFAIP8L3Q5GJ75 292 aa12.15□□□□□ -0.47
FN1-202ENST00000336916 CDYL2Q8N8U2 506 aa12.15□□□□□ -0.47
FN1-202ENST00000336916 FBXO30Q8TB52 745 aa12.15□□□□□ -0.47
FN1-202ENST00000336916 TMEM150BA6NC51 233 aa12.14□□□□□ -0.47
FN1-202ENST00000336916 CLDN5O00501 218 aa12.14□□□□□ -0.47
FN1-202ENST00000336916 TNFRSF10BO14763 440 aa12.14□□□□□ -0.47
FN1-202ENST00000336916 AREL1O15033 823 aa12.14□□□□□ -0.47
FN1-202ENST00000336916 TOP3BO95985 862 aaKnown RBP12.14□□□□□ -0.47
FN1-202ENST00000336916 ALAS2P22557 587 aa12.14□□□□□ -0.47
FN1-202ENST00000336916 OR4K2Q8NGD2 314 aa12.14□□□□□ -0.47
FN1-202ENST00000336916 CD99L2Q8TCZ2 262 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms