RNA–Protein interactions for RNA: ENST00000336824.8

FNDC3B-201, Transcript of fibronectin type III domain containing 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC3B, Length 7,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-201ENST00000336824 A0A0J9YYE9 177 aa9.21□□□□□ -0.93
FNDC3B-201ENST00000336824 H3BQ06 376 aaPredicted RBP9.21□□□□□ -0.93
FNDC3B-201ENST00000336824 TRBC1P01850 177 aa9.21□□□□□ -0.93
FNDC3B-201ENST00000336824 PRKCGP05129 697 aa9.21□□□□□ -0.93
FNDC3B-201ENST00000336824 DHPSP49366 369 aaPredicted RBP9.21□□□□□ -0.93
FNDC3B-201ENST00000336824 FOXD4Q12950 439 aaPredicted RBP9.21□□□□□ -0.93
FNDC3B-201ENST00000336824 QPCTQ16769 361 aa9.21□□□□□ -0.93
FNDC3B-201ENST00000336824 DGKKQ5KSL6 1271 aa9.21□□□□□ -0.93
FNDC3B-201ENST00000336824 CPNE9Q8IYJ1 553 aa9.21□□□□□ -0.93
FNDC3B-201ENST00000336824 HIC2Q96JB3 615 aa9.21□□□□□ -0.93
FNDC3B-201ENST00000336824 MMADHCQ9H3L0 296 aaPredicted RBP9.21□□□□□ -0.93
FNDC3B-201ENST00000336824 CCDC167Q9P0B6 97 aa9.21□□□□□ -0.93
FNDC3B-201ENST00000336824 MT-CO1P00395 513 aa9.21□□□□□ -0.94
FNDC3B-201ENST00000336824 HOXC13P31276 330 aa9.21□□□□□ -0.94
FNDC3B-201ENST00000336824 AP1S2P56377 157 aa9.21□□□□□ -0.94
FNDC3B-201ENST00000336824 CPSF6Q16630 551 aaKnown RBP eCLIP9.21□□□□□ -0.941e-5■■■■□ 20.2
FNDC3B-201ENST00000336824 KIAA1161Q6NSJ0 714 aa9.21□□□□□ -0.94
FNDC3B-201ENST00000336824 PRR23BQ6ZRT6 265 aa9.21□□□□□ -0.94
FNDC3B-201ENST00000336824 CILP2Q8IUL8 1156 aa9.21□□□□□ -0.94
FNDC3B-201ENST00000336824 SDK1Q7Z5N4 2213 aa9.21□□□□□ -0.94
FNDC3B-201ENST00000336824 FFAR3O14843 346 aa9.21□□□□□ -0.94
FNDC3B-201ENST00000336824 GPR42O15529 346 aa9.21□□□□□ -0.94
FNDC3B-201ENST00000336824 DNAJC8O75937 253 aaPredicted RBP9.21□□□□□ -0.94
FNDC3B-201ENST00000336824 KCNH1O95259 989 aa9.21□□□□□ -0.94
FNDC3B-201ENST00000336824 TCN1P20061 433 aaPredicted RBP9.21□□□□□ -0.94
FNDC3B-201ENST00000336824 SLC26A3P40879 764 aa9.21□□□□□ -0.94
FNDC3B-201ENST00000336824 TRMT10BQ6PF06 316 aaKnown RBP9.21□□□□□ -0.94
FNDC3B-201ENST00000336824 TMEM173Q86WV6 379 aaPredicted RBP9.21□□□□□ -0.94
FNDC3B-201ENST00000336824 GKN2Q86XP6 184 aa9.21□□□□□ -0.94
FNDC3B-201ENST00000336824 ZNF276Q8N554 614 aa9.21□□□□□ -0.94
FNDC3B-201ENST00000336824 C12orf66Q96MD2 445 aa9.21□□□□□ -0.94
FNDC3B-201ENST00000336824 DNAJC28Q9NX36 388 aa9.21□□□□□ -0.94
FNDC3B-201ENST00000336824 KLHL28Q9NXS3 571 aa9.21□□□□□ -0.94
FNDC3B-201ENST00000336824 PNMA8BQ9ULN7 279 aaPredicted RBP9.21□□□□□ -0.94
FNDC3B-201ENST00000336824 CEP290O15078 2479 aa9.21□□□□□ -0.94
FNDC3B-201ENST00000336824 CCDC189A1A4V9 331 aa9.21□□□□□ -0.94
FNDC3B-201ENST00000336824 NAE1Q13564 534 aa9.21□□□□□ -0.94
FNDC3B-201ENST00000336824 SUZ12Q15022 739 aaKnown RBP9.21□□□□□ -0.94
FNDC3B-201ENST00000336824 DUSP6Q16828 381 aa9.21□□□□□ -0.94
FNDC3B-201ENST00000336824 SPATA19Q7Z5L4 167 aa9.21□□□□□ -0.94
FNDC3B-201ENST00000336824 RALGPS2Q86X27 583 aaPredicted RBP9.21□□□□□ -0.94
FNDC3B-201ENST00000336824 TMPRSS6Q8IU80 811 aa9.21□□□□□ -0.94
FNDC3B-201ENST00000336824 TRAM1L1Q8N609 369 aa9.21□□□□□ -0.94
FNDC3B-201ENST00000336824 SIDT2Q8NBJ9 832 aaKnown RBP9.21□□□□□ -0.94
FNDC3B-201ENST00000336824 GSTCDQ8NEC7 633 aa9.21□□□□□ -0.94
FNDC3B-201ENST00000336824 ZNF555Q8NEP9 628 aa9.21□□□□□ -0.94
FNDC3B-201ENST00000336824 SRMSQ9H3Y6 488 aa9.21□□□□□ -0.94
FNDC3B-201ENST00000336824 CROTQ9UKG9 612 aa9.21□□□□□ -0.94
FNDC3B-201ENST00000336824 FCHO1O14526 889 aa9.2□□□□□ -0.94
FNDC3B-201ENST00000336824 OAS1P00973 400 aaKnown RBP9.2□□□□□ -0.94
FNDC3B-201ENST00000336824 CST6Q15828 149 aa9.2□□□□□ -0.94
FNDC3B-201ENST00000336824 SCUBE1Q8IWY4 988 aa9.2□□□□□ -0.94
FNDC3B-201ENST00000336824 APCDD1Q8J025 514 aa9.2□□□□□ -0.94
FNDC3B-201ENST00000336824 NPWQ8N729 165 aa9.2□□□□□ -0.94
FNDC3B-201ENST00000336824 TERB1Q8NA31 727 aa9.2□□□□□ -0.94
FNDC3B-201ENST00000336824 TTLQ8NG68 377 aa9.2□□□□□ -0.94
FNDC3B-201ENST00000336824 RTP4Q96DX8 246 aa9.2□□□□□ -0.94
FNDC3B-201ENST00000336824 OLFM3Q96PB7 478 aa9.2□□□□□ -0.94
FNDC3B-201ENST00000336824 KCTD14Q9BQ13 255 aaPredicted RBP9.2□□□□□ -0.94
FNDC3B-201ENST00000336824 SPATA6Q9NWH7 488 aaPredicted RBP9.2□□□□□ -0.94
FNDC3B-201ENST00000336824 ACSL5Q9ULC5 683 aa9.2□□□□□ -0.94
FNDC3B-201ENST00000336824 TTC34A8MYJ7 566 aa9.2□□□□□ -0.94
FNDC3B-201ENST00000336824 LAMTOR5O43504 91 aa9.2□□□□□ -0.94
FNDC3B-201ENST00000336824 DCXO43602 365 aa9.2□□□□□ -0.94
FNDC3B-201ENST00000336824 GNAZP19086 355 aa9.2□□□□□ -0.94
FNDC3B-201ENST00000336824 ASMTP46597 345 aa9.2□□□□□ -0.94
FNDC3B-201ENST00000336824 CPA2P48052 419 aa9.2□□□□□ -0.94
FNDC3B-201ENST00000336824 GTF2H2Q13888 395 aa9.2□□□□□ -0.94
FNDC3B-201ENST00000336824 GTF2H2CQ6P1K8 395 aa9.2□□□□□ -0.94
FNDC3B-201ENST00000336824 NCEH1Q6PIU2 408 aa9.2□□□□□ -0.94
FNDC3B-201ENST00000336824 GPN3Q9UHW5 284 aaPredicted RBP9.2□□□□□ -0.94
FNDC3B-201ENST00000336824 SLC10A2Q12908 348 aaPredicted RBP9.2□□□□□ -0.94
FNDC3B-201ENST00000336824 LCP2Q13094 533 aa9.2□□□□□ -0.94
FNDC3B-201ENST00000336824 MED21Q13503 144 aa9.2□□□□□ -0.94
FNDC3B-201ENST00000336824 OR2T3Q8NH03 318 aa9.2□□□□□ -0.94
FNDC3B-201ENST00000336824 MRGPRX2Q96LB1 330 aa9.2□□□□□ -0.94
FNDC3B-201ENST00000336824 CAPN10Q9HC96 672 aa9.2□□□□□ -0.94
FNDC3B-201ENST00000336824 PCDH12Q9NPG4 1184 aa9.2□□□□□ -0.94
FNDC3B-201ENST00000336824 B4GALT6Q9UBX8 382 aa9.2□□□□□ -0.94
FNDC3B-201ENST00000336824 LIN7AO14910 233 aaPredicted RBP9.2□□□□□ -0.94
FNDC3B-201ENST00000336824 CFIP05156 583 aa9.2□□□□□ -0.94
FNDC3B-201ENST00000336824 UROSP10746 265 aa9.2□□□□□ -0.94
FNDC3B-201ENST00000336824 CD70P32970 193 aa9.2□□□□□ -0.94
FNDC3B-201ENST00000336824 STC1P52823 247 aa9.2□□□□□ -0.94
FNDC3B-201ENST00000336824 CHRNB3Q05901 458 aa9.2□□□□□ -0.94
FNDC3B-201ENST00000336824 PON2Q15165 354 aa9.2□□□□□ -0.94
FNDC3B-201ENST00000336824 PRR23CQ6ZRP0 262 aa9.2□□□□□ -0.94
FNDC3B-201ENST00000336824 CUZD1Q86UP6 607 aa9.2□□□□□ -0.94
FNDC3B-201ENST00000336824 LINC01599Q8WXQ3 324 aa9.2□□□□□ -0.94
FNDC3B-201ENST00000336824 ZNF334Q9HCZ1 680 aaPredicted RBP9.2□□□□□ -0.94
FNDC3B-201ENST00000336824 HAO1Q9UJM8 370 aa9.2□□□□□ -0.94
FNDC3B-201ENST00000336824 ZNF780BQ9Y6R6 833 aa9.2□□□□□ -0.94
FNDC3B-201ENST00000336824 VEGFDO43915 354 aa9.2□□□□□ -0.94
FNDC3B-201ENST00000336824 TAS2R39P59534 338 aa9.2□□□□□ -0.94
FNDC3B-201ENST00000336824 MED27Q6P2C8 311 aa9.2□□□□□ -0.94
FNDC3B-201ENST00000336824 FOXJ1Q92949 421 aa9.2□□□□□ -0.94
FNDC3B-201ENST00000336824 POP5Q969H6 163 aaKnown RBP9.2□□□□□ -0.94
FNDC3B-201ENST00000336824 TCEAL4Q96EI5 215 aa9.2□□□□□ -0.94
FNDC3B-201ENST00000336824 CHCHD3Q9NX63 227 aaKnown RBP9.2□□□□□ -0.94
FNDC3B-201ENST00000336824 NPHS1O60500 1241 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms