RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 GLT1D1Q96MS3 346 aa9.72□□□□□ -0.85
COL4A6-201ENST00000334504 RHOJQ9H4E5 214 aa9.72□□□□□ -0.85
COL4A6-201ENST00000334504 CXCR6O00574 342 aa9.72□□□□□ -0.85
COL4A6-201ENST00000334504 EI24O14681 340 aa9.72□□□□□ -0.85
COL4A6-201ENST00000334504 FGBP02675 491 aa9.72□□□□□ -0.85
COL4A6-201ENST00000334504 GNPDA1P46926 289 aa9.72□□□□□ -0.85
COL4A6-201ENST00000334504 RPP38P78345 283 aaKnown RBP9.72□□□□□ -0.85
COL4A6-201ENST00000334504 FASTKD3Q14CZ7 662 aaKnown RBP9.72□□□□□ -0.85
COL4A6-201ENST00000334504 PLA2G4EQ3MJ16 856 aa9.72□□□□□ -0.85
COL4A6-201ENST00000334504 MPPE1Q53F39 396 aa9.72□□□□□ -0.85
COL4A6-201ENST00000334504 METTL21CQ5VZV1 264 aa9.72□□□□□ -0.85
COL4A6-201ENST00000334504 RTL4Q6ZR62 310 aa9.72□□□□□ -0.85
COL4A6-201ENST00000334504 OTOP1Q7RTM1 612 aa9.72□□□□□ -0.85
COL4A6-201ENST00000334504 ZDHHC21Q8IVQ6 265 aa9.72□□□□□ -0.85
COL4A6-201ENST00000334504 ZNF34Q8IZ26 560 aa9.72□□□□□ -0.85
COL4A6-201ENST00000334504 ELMOD2Q8IZ81 293 aa9.72□□□□□ -0.85
COL4A6-201ENST00000334504 COQ8AQ8NI60 647 aa9.72□□□□□ -0.85
COL4A6-201ENST00000334504 RFKQ969G6 155 aa9.72□□□□□ -0.85
COL4A6-201ENST00000334504 MROH8Q9H579 483 aa9.72□□□□□ -0.85
COL4A6-201ENST00000334504 RIOX1Q9H6W3 641 aa9.72□□□□□ -0.85
COL4A6-201ENST00000334504 TMEM5Q9Y2B1 443 aa9.72□□□□□ -0.85
COL4A6-201ENST00000334504 ABCC3O15438 1527 aa9.72□□□□□ -0.85
COL4A6-201ENST00000334504 LOC100509620A0A075B734 347 aa9.72□□□□□ -0.85
COL4A6-201ENST00000334504 PDCD5O14737 125 aa9.72□□□□□ -0.85
COL4A6-201ENST00000334504 IFNW1P05000 195 aa9.72□□□□□ -0.85
COL4A6-201ENST00000334504 PGAM2P15259 253 aa9.72□□□□□ -0.85
COL4A6-201ENST00000334504 BMP6P22004 513 aa9.72□□□□□ -0.85
COL4A6-201ENST00000334504 SEMA3AQ14563 771 aa9.72□□□□□ -0.85
COL4A6-201ENST00000334504 SLC39A12Q504Y0 691 aa9.72□□□□□ -0.85
COL4A6-201ENST00000334504 ZNF697Q5TEC3 545 aa9.72□□□□□ -0.85
COL4A6-201ENST00000334504 HDDC3Q8N4P3 179 aa9.72□□□□□ -0.85
COL4A6-201ENST00000334504 TMIEQ8NEW7 156 aa9.72□□□□□ -0.85
COL4A6-201ENST00000334504 OR10A6Q8NH74 314 aa9.72□□□□□ -0.85
COL4A6-201ENST00000334504 DPAGT1Q9H3H5 408 aa9.72□□□□□ -0.85
COL4A6-201ENST00000334504 RC3H2Q9HBD1 1191 aaKnown RBP9.72□□□□□ -0.85
COL4A6-201ENST00000334504 TLL2Q9Y6L7 1015 aa9.72□□□□□ -0.85
COL4A6-201ENST00000334504 ASTN1O14525 1302 aa9.72□□□□□ -0.85
COL4A6-201ENST00000334504 SMAD9O15198 467 aaKnown RBP9.72□□□□□ -0.85
COL4A6-201ENST00000334504 CSN2P05814 226 aa9.72□□□□□ -0.85
COL4A6-201ENST00000334504 MC4RP32245 332 aa9.72□□□□□ -0.85
COL4A6-201ENST00000334504 ATXN1P54253 815 aaKnown RBP9.72□□□□□ -0.85
COL4A6-201ENST00000334504 ARL13AQ5H913 290 aaPredicted RBP9.72□□□□□ -0.85
COL4A6-201ENST00000334504 IL23RQ5VWK5 629 aa9.72□□□□□ -0.85
COL4A6-201ENST00000334504 TOMM5Q8N4H5 51 aa9.72□□□□□ -0.85
COL4A6-201ENST00000334504 OR10H4Q8NGA5 316 aa9.72□□□□□ -0.85
COL4A6-201ENST00000334504 HIPK3Q9H422 1215 aa9.72□□□□□ -0.85
COL4A6-201ENST00000334504 SAV1Q9H4B6 383 aaPredicted RBP9.72□□□□□ -0.85
COL4A6-201ENST00000334504 EBF2Q9HAK2 575 aa9.72□□□□□ -0.85
COL4A6-201ENST00000334504 PAPSS2O95340 614 aaPredicted RBP9.72□□□□□ -0.85
COL4A6-201ENST00000334504 OGNP20774 298 aaKnown RBP9.72□□□□□ -0.85
COL4A6-201ENST00000334504 SLC15A1P46059 708 aa9.72□□□□□ -0.85
COL4A6-201ENST00000334504 PGM5Q15124 567 aa9.72□□□□□ -0.85
COL4A6-201ENST00000334504 MOGQ16653 247 aa9.72□□□□□ -0.85
COL4A6-201ENST00000334504 CRY2Q49AN0 593 aa9.72□□□□□ -0.85
COL4A6-201ENST00000334504 HSD17B12Q53GQ0 312 aa9.72□□□□□ -0.85
COL4A6-201ENST00000334504 SLC30A6Q6NXT4 461 aa9.72□□□□□ -0.85
COL4A6-201ENST00000334504 CEP68Q76N32 757 aa9.72□□□□□ -0.85
COL4A6-201ENST00000334504 GRIN3AQ8TCU5 1115 aa9.72□□□□□ -0.85
COL4A6-201ENST00000334504 SEMA3CQ99985 751 aa9.72□□□□□ -0.85
COL4A6-201ENST00000334504 ASB7Q9H672 318 aa9.72□□□□□ -0.85
COL4A6-201ENST00000334504 MARK1Q9P0L2 795 aa9.72□□□□□ -0.85
COL4A6-201ENST00000334504 MBD5Q9P267 1494 aa9.72□□□□□ -0.85
COL4A6-201ENST00000334504 DNAJA2O60884 412 aa9.71□□□□□ -0.85
COL4A6-201ENST00000334504 ERN1O75460 977 aaKnown RBP9.71□□□□□ -0.85
COL4A6-201ENST00000334504 URODP06132 367 aa9.71□□□□□ -0.85
COL4A6-201ENST00000334504 RPS3P23396 243 aaKnown RBP eCLIP9.71□□□□□ -0.85
COL4A6-201ENST00000334504 KIR3DL1P43629 444 aa9.71□□□□□ -0.85
COL4A6-201ENST00000334504 SYT16Q17RD7 645 aa9.71□□□□□ -0.85
COL4A6-201ENST00000334504 GPR153Q6NV75 609 aa9.71□□□□□ -0.85
COL4A6-201ENST00000334504 LRRC55Q6ZSA7 311 aa9.71□□□□□ -0.85
COL4A6-201ENST00000334504 FAM35AQ86V20 835 aa9.71□□□□□ -0.85
COL4A6-201ENST00000334504 ZNF563Q8TA94 476 aa9.71□□□□□ -0.85
COL4A6-201ENST00000334504 NKX2-3Q8TAU0 364 aa9.71□□□□□ -0.85
COL4A6-201ENST00000334504 CSGALNACT1Q8TDX6 532 aa9.71□□□□□ -0.85
COL4A6-201ENST00000334504 CCDC107Q8WV48 283 aa9.71□□□□□ -0.85
COL4A6-201ENST00000334504 POLR2J2Q9GZM3 115 aaKnown RBP9.71□□□□□ -0.85
COL4A6-201ENST00000334504 ELOVL4Q9GZR5 314 aa9.71□□□□□ -0.85
COL4A6-201ENST00000334504 TVP23BQ9NYZ1 205 aa9.71□□□□□ -0.85
COL4A6-201ENST00000334504 TBC1D14Q9P2M4 693 aa9.71□□□□□ -0.85
COL4A6-201ENST00000334504 CEP152O94986 1710 aa9.71□□□□□ -0.85
COL4A6-201ENST00000334504 PITPNM1O00562 1244 aa9.71□□□□□ -0.85
COL4A6-201ENST00000334504 ADAMDEC1O15204 470 aa9.71□□□□□ -0.85
COL4A6-201ENST00000334504 TBX10O75333 385 aa9.71□□□□□ -0.85
COL4A6-201ENST00000334504 LDOC1O95751 146 aaPredicted RBP9.71□□□□□ -0.85
COL4A6-201ENST00000334504 CTPS1P17812 591 aa9.71□□□□□ -0.85
COL4A6-201ENST00000334504 KLRC2P26717 231 aa9.71□□□□□ -0.85
COL4A6-201ENST00000334504 GNALP38405 381 aa9.71□□□□□ -0.85
COL4A6-201ENST00000334504 CLCN2P51788 898 aa9.71□□□□□ -0.85
COL4A6-201ENST00000334504 FNDC3BQ53EP0 1204 aaKnown RBP9.71□□□□□ -0.85
COL4A6-201ENST00000334504 ZNF627Q7L945 461 aa9.71□□□□□ -0.85
COL4A6-201ENST00000334504 IRF2BP2Q7Z5L9 587 aa9.71□□□□□ -0.85
COL4A6-201ENST00000334504 ITIH5Q86UX2 942 aa9.71□□□□□ -0.85
COL4A6-201ENST00000334504 CCDC120Q96HB5 630 aa9.71□□□□□ -0.85
COL4A6-201ENST00000334504 BARD1Q99728 777 aaKnown RBP9.71□□□□□ -0.85
COL4A6-201ENST00000334504 LGALS13Q9UHV8 139 aa9.71□□□□□ -0.85
COL4A6-201ENST00000334504 ZNRF3Q9ULT6 936 aa9.71□□□□□ -0.85
COL4A6-201ENST00000334504 RPH3AQ9Y2J0 694 aaPredicted RBP9.71□□□□□ -0.85
COL4A6-201ENST00000334504 PCDHB9Q9Y5E1 797 aa9.71□□□□□ -0.85
COL4A6-201ENST00000334504 OR1I1O60431 355 aa9.71□□□□□ -0.85
COL4A6-201ENST00000334504 DPEP1P16444 411 aa9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms