RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 FRS2Q8WU20 508 aa12.66□□□□□ -0.38
CCDC60-201ENST00000327554 FCRL5Q96RD9 977 aa12.66□□□□□ -0.38
CCDC60-201ENST00000327554 GPR20Q99678 358 aa12.66□□□□□ -0.38
CCDC60-201ENST00000327554 FDXACB1Q9BRP7 624 aaPredicted RBP12.66□□□□□ -0.38
CCDC60-201ENST00000327554 DUSP21Q9H596 190 aa12.66□□□□□ -0.38
CCDC60-201ENST00000327554 UTS2RQ9UKP6 389 aa12.66□□□□□ -0.38
CCDC60-201ENST00000327554 PNMA8BQ9ULN7 279 aaPredicted RBP12.66□□□□□ -0.38
CCDC60-201ENST00000327554 CARD8Q9Y2G2 431 aa12.66□□□□□ -0.38
CCDC60-201ENST00000327554 AGAP5A6NIR3 686 aa12.65□□□□□ -0.38
CCDC60-201ENST00000327554 SLC16A6O15403 523 aa12.65□□□□□ -0.38
CCDC60-201ENST00000327554 SLC22A3O75751 556 aa12.65□□□□□ -0.38
CCDC60-201ENST00000327554 ANGPTL1O95841 491 aa12.65□□□□□ -0.38
CCDC60-201ENST00000327554 PTPRAP18433 802 aa12.65□□□□□ -0.38
CCDC60-201ENST00000327554 NAT1P18440 290 aa12.65□□□□□ -0.38
CCDC60-201ENST00000327554 GGT1P19440 569 aa12.65□□□□□ -0.38
CCDC60-201ENST00000327554 MAGP20916 626 aa12.65□□□□□ -0.38
CCDC60-201ENST00000327554 PSMB9P28065 219 aa12.65□□□□□ -0.38
CCDC60-201ENST00000327554 TGFBR2P37173 567 aa12.65□□□□□ -0.38
CCDC60-201ENST00000327554 TRPC1P48995 793 aa12.65□□□□□ -0.38
CCDC60-201ENST00000327554 AIF1P55008 147 aa12.65□□□□□ -0.38
CCDC60-201ENST00000327554 SLC35A2P78381 396 aa12.65□□□□□ -0.38
CCDC60-201ENST00000327554 DGCR6Q14129 220 aa12.65□□□□□ -0.38
CCDC60-201ENST00000327554 KYAT1Q16773 422 aa12.65□□□□□ -0.38
CCDC60-201ENST00000327554 CCDC58Q4VC31 144 aa12.65□□□□□ -0.38
CCDC60-201ENST00000327554 SPESP1Q6UW49 350 aa12.65□□□□□ -0.38
CCDC60-201ENST00000327554 CCBE1Q6UXH8 406 aaPredicted RBP12.65□□□□□ -0.38
CCDC60-201ENST00000327554 ARHGAP36Q6ZRI8 547 aa12.65□□□□□ -0.38
CCDC60-201ENST00000327554 TMEM179BQ7Z7N9 219 aa12.65□□□□□ -0.38
CCDC60-201ENST00000327554 SVOPLQ8N434 492 aa12.65□□□□□ -0.38
CCDC60-201ENST00000327554 MTMR14Q8NCE2 650 aa12.65□□□□□ -0.38
CCDC60-201ENST00000327554 IL17RDQ8NFM7 739 aa12.65□□□□□ -0.38
CCDC60-201ENST00000327554 OR6F1Q8NGZ6 308 aa12.65□□□□□ -0.38
CCDC60-201ENST00000327554 ZBED3Q96IU2 234 aaPredicted RBP12.65□□□□□ -0.38
CCDC60-201ENST00000327554 BRINP2Q9C0B6 783 aa12.65□□□□□ -0.38
CCDC60-201ENST00000327554 COMMD8Q9NX08 183 aa12.65□□□□□ -0.38
CCDC60-201ENST00000327554 SMPD4Q9NXE4 827 aa12.65□□□□□ -0.38
CCDC60-201ENST00000327554 TMEFF2Q9UIK5 374 aaPredicted RBP12.65□□□□□ -0.38
CCDC60-201ENST00000327554 INVSQ9Y283 1065 aa12.65□□□□□ -0.38
CCDC60-201ENST00000327554 EP400Q96L91 3159 aa12.65□□□□□ -0.38
CCDC60-201ENST00000327554 HS6ST1O60243 411 aa12.65□□□□□ -0.38
CCDC60-201ENST00000327554 VPS4BO75351 444 aa12.65□□□□□ -0.38
CCDC60-201ENST00000327554 KATNA1O75449 491 aa12.65□□□□□ -0.38
CCDC60-201ENST00000327554 GOT2P00505 430 aaKnown RBP12.65□□□□□ -0.38
CCDC60-201ENST00000327554 CST1P01037 141 aa12.65□□□□□ -0.38
CCDC60-201ENST00000327554 GTF2E2P29084 291 aaKnown RBP12.65□□□□□ -0.38
CCDC60-201ENST00000327554 MTPNP58546 118 aa12.65□□□□□ -0.38
CCDC60-201ENST00000327554 PPP1R8Q12972 351 aaKnown RBP12.65□□□□□ -0.38
CCDC60-201ENST00000327554 RAPSNQ13702 412 aa12.65□□□□□ -0.38
CCDC60-201ENST00000327554 AGAP6Q5VW22 663 aa12.65□□□□□ -0.38
CCDC60-201ENST00000327554 TMC5Q6UXY8 1006 aa12.65□□□□□ -0.38
CCDC60-201ENST00000327554 DLEU7Q6UYE1 221 aa12.65□□□□□ -0.38
CCDC60-201ENST00000327554 GDPD3Q7L5L3 318 aa12.65□□□□□ -0.38
CCDC60-201ENST00000327554 PLPPR4Q7Z2D5 763 aa12.65□□□□□ -0.38
CCDC60-201ENST00000327554 B3GNT8Q7Z7M8 397 aa12.65□□□□□ -0.38
CCDC60-201ENST00000327554 METTL4Q8N3J2 472 aa12.65□□□□□ -0.38
CCDC60-201ENST00000327554 CELF2-AS1Q8N7Q2 184 aa12.65□□□□□ -0.38
CCDC60-201ENST00000327554 ASCC1Q8N9N2 400 aaKnown RBP12.65□□□□□ -0.38
CCDC60-201ENST00000327554 OR52K2Q8NGK3 314 aa12.65□□□□□ -0.38
CCDC60-201ENST00000327554 PROX1Q92786 737 aa12.65□□□□□ -0.38
CCDC60-201ENST00000327554 AGAP4Q96P64 663 aa12.65□□□□□ -0.38
CCDC60-201ENST00000327554 SNX18Q96RF0 628 aa12.65□□□□□ -0.38
CCDC60-201ENST00000327554 GLOD4Q9HC38 313 aa12.65□□□□□ -0.38
CCDC60-201ENST00000327554 C3orf18Q9UK00 162 aa12.65□□□□□ -0.38
CCDC60-201ENST00000327554 FBXW11Q9UKB1 542 aa12.65□□□□□ -0.38
CCDC60-201ENST00000327554 COL4A5P29400 1685 aa12.65□□□□□ -0.38
CCDC60-201ENST00000327554 METTL15A6NJ78 407 aa12.64□□□□□ -0.39
CCDC60-201ENST00000327554 WNT10BO00744 389 aa12.64□□□□□ -0.39
CCDC60-201ENST00000327554 SNX2O60749 519 aa12.64□□□□□ -0.39
CCDC60-201ENST00000327554 USP2O75604 605 aaPredicted RBP12.64□□□□□ -0.39
CCDC60-201ENST00000327554 ANXA9O76027 345 aa12.64□□□□□ -0.39
CCDC60-201ENST00000327554 PRKD3O94806 890 aa12.64□□□□□ -0.39
CCDC60-201ENST00000327554 ALX3O95076 343 aa12.64□□□□□ -0.39
CCDC60-201ENST00000327554 ARIH2O95376 493 aa12.64□□□□□ -0.39
CCDC60-201ENST00000327554 NPPAP01160 153 aa12.64□□□□□ -0.39
CCDC60-201ENST00000327554 MT-ND2P03891 347 aa12.64□□□□□ -0.39
CCDC60-201ENST00000327554 KRT8P05787 483 aa12.64□□□□□ -0.39
CCDC60-201ENST00000327554 MTHFD2P13995 350 aa12.64□□□□□ -0.39
CCDC60-201ENST00000327554 CD1DP15813 335 aa12.64□□□□□ -0.39
CCDC60-201ENST00000327554 JUNDP17535 347 aa12.64□□□□□ -0.39
CCDC60-201ENST00000327554 PRKACGP22612 351 aa12.64□□□□□ -0.39
CCDC60-201ENST00000327554 FMO3P31513 532 aa12.64□□□□□ -0.39
CCDC60-201ENST00000327554 SLC26A3P40879 764 aa12.64□□□□□ -0.39
CCDC60-201ENST00000327554 ST13P50502 369 aaKnown RBP12.64□□□□□ -0.39
CCDC60-201ENST00000327554 RACK1P63244 317 aaKnown RBP12.64□□□□□ -0.39
CCDC60-201ENST00000327554 IL18R1Q13478 541 aa12.64□□□□□ -0.39
CCDC60-201ENST00000327554 CES5AQ6NT32 575 aa12.64□□□□□ -0.39
CCDC60-201ENST00000327554 CCDC81Q6ZN84 652 aa12.64□□□□□ -0.39
CCDC60-201ENST00000327554 SPATC1Q76KD6 591 aa12.64□□□□□ -0.39
CCDC60-201ENST00000327554 C14orf80Q86SX3 495 aa12.64□□□□□ -0.39
CCDC60-201ENST00000327554 PLD3Q8IV08 490 aa12.64□□□□□ -0.39
CCDC60-201ENST00000327554 ZHX1-C8orf76Q96EF9 292 aa12.64□□□□□ -0.39
CCDC60-201ENST00000327554 ITCHQ96J02 903 aa12.64□□□□□ -0.39
CCDC60-201ENST00000327554 PPM1MQ96MI6 270 aa12.64□□□□□ -0.39
CCDC60-201ENST00000327554 GAD1Q99259 594 aa12.64□□□□□ -0.39
CCDC60-201ENST00000327554 MMP27Q9H306 513 aa12.64□□□□□ -0.39
CCDC60-201ENST00000327554 ATXN3LQ9H3M9 355 aa12.64□□□□□ -0.39
CCDC60-201ENST00000327554 KAT8Q9H7Z6 458 aaKnown RBP12.64□□□□□ -0.39
CCDC60-201ENST00000327554 AASSQ9UDR5 926 aa12.64□□□□□ -0.39
CCDC60-201ENST00000327554 TNPO2O14787 897 aaKnown RBP12.64□□□□□ -0.39
CCDC60-201ENST00000327554 BCKDKO14874 412 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms