RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 SNX5Q9Y5X3 404 aa12.75□□□□□ -0.37
HMGCS1-201ENST00000325110 SNAP91O60641 907 aa12.75□□□□□ -0.37
HMGCS1-201ENST00000325110 SEC22BO75396 215 aa12.75□□□□□ -0.37
HMGCS1-201ENST00000325110 MLYCDO95822 493 aa12.75□□□□□ -0.37
HMGCS1-201ENST00000325110 UROSP10746 265 aa12.75□□□□□ -0.37
HMGCS1-201ENST00000325110 ELNP15502 786 aa12.75□□□□□ -0.37
HMGCS1-201ENST00000325110 PRKACGP22612 351 aa12.75□□□□□ -0.37
HMGCS1-201ENST00000325110 HOXC13P31276 330 aa12.75□□□□□ -0.37
HMGCS1-201ENST00000325110 ZBED5Q49AG3 693 aa12.75□□□□□ -0.37
HMGCS1-201ENST00000325110 MORN1Q5T089 497 aa12.75□□□□□ -0.37
HMGCS1-201ENST00000325110 KANK2Q63ZY3 851 aa12.75□□□□□ -0.37
HMGCS1-201ENST00000325110 ANKRD46Q86W74 232 aa12.75□□□□□ -0.37
HMGCS1-201ENST00000325110 KIAA2013Q8IYS2 634 aa12.75□□□□□ -0.37
HMGCS1-201ENST00000325110 MINDY1Q8N5J2 469 aa12.75□□□□□ -0.37
HMGCS1-201ENST00000325110 MYRFLQ96LU7 910 aa12.75□□□□□ -0.37
HMGCS1-201ENST00000325110 OSBPL6Q9BZF3 934 aa12.75□□□□□ -0.37
HMGCS1-201ENST00000325110 LTB4R2Q9NPC1 389 aa12.75□□□□□ -0.37
HMGCS1-201ENST00000325110 AGPAT4Q9NRZ5 378 aa12.75□□□□□ -0.37
HMGCS1-201ENST00000325110 DNAAF2Q9NVR5 837 aaKnown RBP12.75□□□□□ -0.37
HMGCS1-201ENST00000325110 LRFN2Q9ULH4 789 aa12.75□□□□□ -0.37
HMGCS1-201ENST00000325110 ANKRD33BA6NCL7 494 aa12.75□□□□□ -0.37
HMGCS1-201ENST00000325110 M0QZQ0 153 aa12.75□□□□□ -0.37
HMGCS1-201ENST00000325110 ATE1O95260 518 aa12.75□□□□□ -0.37
HMGCS1-201ENST00000325110 ESRRBO95718 433 aa12.75□□□□□ -0.37
HMGCS1-201ENST00000325110 PIM1P11309 404 aaPredicted RBP12.75□□□□□ -0.37
HMGCS1-201ENST00000325110 RFC2P35250 354 aa12.75□□□□□ -0.37
HMGCS1-201ENST00000325110 CSRP3P50461 194 aa12.75□□□□□ -0.37
HMGCS1-201ENST00000325110 C21orf59P57076 290 aa12.75□□□□□ -0.37
HMGCS1-201ENST00000325110 VAC14Q08AM6 782 aa12.75□□□□□ -0.37
HMGCS1-201ENST00000325110 TSTA3Q13630 321 aaPredicted RBP12.75□□□□□ -0.37
HMGCS1-201ENST00000325110 LAPTM4AQ15012 233 aa12.75□□□□□ -0.37
HMGCS1-201ENST00000325110 ATXN7L2Q5T6C5 722 aaPredicted RBP12.75□□□□□ -0.37
HMGCS1-201ENST00000325110 RNF219Q5W0B1 726 aaPredicted RBP12.75□□□□□ -0.37
HMGCS1-201ENST00000325110 TMBIM1Q969X1 311 aa12.75□□□□□ -0.37
HMGCS1-201ENST00000325110 TRIM54Q9BYV2 358 aa12.75□□□□□ -0.37
HMGCS1-201ENST00000325110 CLPBQ9H078 707 aa12.75□□□□□ -0.37
HMGCS1-201ENST00000325110 ARMC1Q9NVT9 282 aa12.75□□□□□ -0.37
HMGCS1-201ENST00000325110 PRAMEF11O60813 436 aa12.74□□□□□ -0.37
HMGCS1-201ENST00000325110 CST1P01037 141 aa12.74□□□□□ -0.37
HMGCS1-201ENST00000325110 CYP11A1P05108 521 aa12.74□□□□□ -0.37
HMGCS1-201ENST00000325110 ALPIP09923 528 aa12.74□□□□□ -0.37
HMGCS1-201ENST00000325110 CYP4B1P13584 511 aa12.74□□□□□ -0.37
HMGCS1-201ENST00000325110 RHOAP61586 193 aa12.74□□□□□ -0.37
HMGCS1-201ENST00000325110 GALNT1Q10472 559 aaPredicted RBP12.74□□□□□ -0.37
HMGCS1-201ENST00000325110 CPSF6Q16630 551 aaKnown RBP eCLIP12.74□□□□□ -0.37
HMGCS1-201ENST00000325110 PRSS55Q6UWB4 352 aaPredicted RBP12.74□□□□□ -0.37
HMGCS1-201ENST00000325110 EFL1Q7Z2Z2 1120 aaKnown RBP12.74□□□□□ -0.37
HMGCS1-201ENST00000325110 CCDC117Q8IWD4 279 aaPredicted RBP12.74□□□□□ -0.37
HMGCS1-201ENST00000325110 ZUFSPQ96AP4 578 aa12.74□□□□□ -0.37
HMGCS1-201ENST00000325110 C1orf74Q96LT6 269 aa12.74□□□□□ -0.37
HMGCS1-201ENST00000325110 ZBED2Q9BTP6 218 aa12.74□□□□□ -0.37
HMGCS1-201ENST00000325110 DPY30Q9C005 99 aa12.74□□□□□ -0.37
HMGCS1-201ENST00000325110 ARHGAP39Q9C0H5 1083 aa12.74□□□□□ -0.37
HMGCS1-201ENST00000325110 IPPKQ9H8X2 491 aa12.74□□□□□ -0.37
HMGCS1-201ENST00000325110 PLGRKTQ9HBL7 147 aa12.74□□□□□ -0.37
HMGCS1-201ENST00000325110 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.74□□□□□ -0.37
HMGCS1-201ENST00000325110 COMMD8Q9NX08 183 aa12.74□□□□□ -0.37
HMGCS1-201ENST00000325110 LCHNA4D1U4 455 aa12.74□□□□□ -0.37
HMGCS1-201ENST00000325110 INSIG1O15503 277 aa12.74□□□□□ -0.37
HMGCS1-201ENST00000325110 TBC1D4O60343 1298 aa12.74□□□□□ -0.37
HMGCS1-201ENST00000325110 VPS4BO75351 444 aa12.74□□□□□ -0.37
HMGCS1-201ENST00000325110 LRATO95237 230 aa12.74□□□□□ -0.37
HMGCS1-201ENST00000325110 ZNF682O95780 498 aa12.74□□□□□ -0.37
HMGCS1-201ENST00000325110 BCL10O95999 233 aa12.74□□□□□ -0.37
HMGCS1-201ENST00000325110 OGNP20774 298 aaKnown RBP12.74□□□□□ -0.37
HMGCS1-201ENST00000325110 ERVK-8P63133 956 aa12.74□□□□□ -0.37
HMGCS1-201ENST00000325110 SELPLGQ14242 412 aa12.74□□□□□ -0.37
HMGCS1-201ENST00000325110 FAM174BQ3ZCQ3 159 aa12.74□□□□□ -0.37
HMGCS1-201ENST00000325110 LCN8Q6JVE9 175 aa12.74□□□□□ -0.37
HMGCS1-201ENST00000325110 OGFOD2Q6N063 350 aa12.74□□□□□ -0.37
HMGCS1-201ENST00000325110 DDHD1Q8NEL9 900 aa12.74□□□□□ -0.37
HMGCS1-201ENST00000325110 ZNF555Q8NEP9 628 aa12.74□□□□□ -0.37
HMGCS1-201ENST00000325110 OR2T12Q8NG77 320 aa12.74□□□□□ -0.37
HMGCS1-201ENST00000325110 OR2T11Q8NH01 316 aa12.74□□□□□ -0.37
HMGCS1-201ENST00000325110 AURKBQ96GD4 344 aaPredicted RBP12.74□□□□□ -0.37
HMGCS1-201ENST00000325110 NSUN3Q9H649 340 aaKnown RBP12.74□□□□□ -0.37
HMGCS1-201ENST00000325110 PRDM5Q9NQX1 630 aaPredicted RBP12.74□□□□□ -0.37
HMGCS1-201ENST00000325110 GPR45Q9Y5Y3 372 aa12.74□□□□□ -0.37
HMGCS1-201ENST00000325110 OAS3Q9Y6K5 1087 aaKnown RBP12.74□□□□□ -0.37
HMGCS1-201ENST00000325110 SBF1O95248 1867 aa12.74□□□□□ -0.37
HMGCS1-201ENST00000325110 HOXB8P17481 243 aaPredicted RBP12.74□□□□□ -0.37
HMGCS1-201ENST00000325110 ALDH4A1P30038 563 aa12.74□□□□□ -0.37
HMGCS1-201ENST00000325110 FLT3LGP49771 235 aa12.74□□□□□ -0.37
HMGCS1-201ENST00000325110 YBEYP58557 167 aaPredicted RBP12.74□□□□□ -0.37
HMGCS1-201ENST00000325110 DGCR6Q14129 220 aa12.74□□□□□ -0.37
HMGCS1-201ENST00000325110 MAPKAPK3Q16644 382 aa12.74□□□□□ -0.37
HMGCS1-201ENST00000325110 PABPC1LQ4VXU2 614 aaKnown RBP12.74□□□□□ -0.37
HMGCS1-201ENST00000325110 SPOUT1Q5T280 376 aaKnown RBP12.74□□□□□ -0.37
HMGCS1-201ENST00000325110 TBPL2Q6SJ96 375 aa12.74□□□□□ -0.37
HMGCS1-201ENST00000325110 SPATA19Q7Z5L4 167 aa12.74□□□□□ -0.37
HMGCS1-201ENST00000325110 GALNT5Q7Z7M9 940 aa12.74□□□□□ -0.37
HMGCS1-201ENST00000325110 GPR62Q9BZJ7 368 aa12.74□□□□□ -0.37
HMGCS1-201ENST00000325110 AIG1Q9NVV5 245 aa12.74□□□□□ -0.37
HMGCS1-201ENST00000325110 LMCD1Q9NZU5 365 aa12.74□□□□□ -0.37
HMGCS1-201ENST00000325110 ADGRE2Q9UHX3 823 aa12.74□□□□□ -0.37
HMGCS1-201ENST00000325110 LOC285095A0A1B0GVY8 99 aa12.73□□□□□ -0.37
HMGCS1-201ENST00000325110 TOR1BO14657 336 aa12.73□□□□□ -0.37
HMGCS1-201ENST00000325110 DFNA5O60443 496 aa12.73□□□□□ -0.37
HMGCS1-201ENST00000325110 ANXA6P08133 673 aa12.73□□□□□ -0.37
HMGCS1-201ENST00000325110 HSD17B1P14061 328 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms