RNA–Protein interactions for RNA: ENST00000323926.10

FN1-201, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-201ENST00000323926 IPCEF1Q8WWN9 437 aaPredicted RBP12.51□□□□□ -0.41
FN1-201ENST00000323926 GPR20Q99678 358 aa12.51□□□□□ -0.41
FN1-201ENST00000323926 ANKRD36A6QL64 1941 aa12.51□□□□□ -0.41
FN1-201ENST00000323926 SNRNP200O75643 2136 aaKnown RBP12.51□□□□□ -0.41
FN1-201ENST00000323926 GSTT1P30711 240 aa12.51□□□□□ -0.41
FN1-201ENST00000323926 MPIP34949 423 aa12.51□□□□□ -0.41
FN1-201ENST00000323926 RPL38P63173 70 aaKnown RBP12.51□□□□□ -0.41
FN1-201ENST00000323926 PLEKHG6Q3KR16 790 aa12.51□□□□□ -0.41
FN1-201ENST00000323926 SYVN1Q86TM6 617 aa12.51□□□□□ -0.41
FN1-201ENST00000323926 UPF1Q92900 1129 aaKnown RBP eCLIP12.51□□□□□ -0.414e-14■□□□□ 8.6
FN1-201ENST00000323926 POLMQ9NP87 494 aaPredicted RBP12.51□□□□□ -0.41
FN1-201ENST00000323926 ARID1AO14497 2285 aa12.51□□□□□ -0.41
FN1-201ENST00000323926 OR14I1A6ND48 311 aa12.51□□□□□ -0.41
FN1-201ENST00000323926 PSIP1O75475 530 aaKnown RBP12.51□□□□□ -0.41
FN1-201ENST00000323926 ICAM3P32942 547 aa12.51□□□□□ -0.41
FN1-201ENST00000323926 ADAM8P78325 824 aa12.51□□□□□ -0.41
FN1-201ENST00000323926 PIGZQ86VD9 579 aa12.51□□□□□ -0.41
FN1-201ENST00000323926 TBC1D10AQ9BXI6 508 aa12.51□□□□□ -0.41
FN1-201ENST00000323926 PSMD11O00231 422 aa12.51□□□□□ -0.41
FN1-201ENST00000323926 BCKDKO14874 412 aa12.51□□□□□ -0.41
FN1-201ENST00000323926 IDH3BO43837 385 aa12.51□□□□□ -0.41
FN1-201ENST00000323926 TSC22D2O75157 780 aa12.51□□□□□ -0.41
FN1-201ENST00000323926 IL12BP29460 328 aa12.51□□□□□ -0.41
FN1-201ENST00000323926 TUBB3Q13509 450 aa12.51□□□□□ -0.41
FN1-201ENST00000323926 C12orf50Q8NA57 414 aaPredicted RBP12.51□□□□□ -0.41
FN1-201ENST00000323926 SLC38A4Q969I6 547 aa12.51□□□□□ -0.41
FN1-201ENST00000323926 ELL3Q9HB65 397 aaPredicted RBP12.51□□□□□ -0.41
FN1-201ENST00000323926 ASTN1O14525 1302 aa12.51□□□□□ -0.41
FN1-201ENST00000323926 PRKAR2AP13861 404 aaKnown RBP12.51□□□□□ -0.41
FN1-201ENST00000323926 TAF1AQ15573 450 aaPredicted RBP12.51□□□□□ -0.41
FN1-201ENST00000323926 PUS10Q3MIT2 529 aaKnown RBP12.51□□□□□ -0.41
FN1-201ENST00000323926 DNAJC14Q6Y2X3 702 aaPredicted RBP12.51□□□□□ -0.41
FN1-201ENST00000323926 OR4C15Q8NGM1 316 aa12.51□□□□□ -0.41
FN1-201ENST00000323926 HDAC10Q969S8 669 aa12.51□□□□□ -0.41
FN1-201ENST00000323926 GPER1Q99527 375 aa12.51□□□□□ -0.41
FN1-201ENST00000323926 VIPP01282 170 aa12.51□□□□□ -0.41
FN1-201ENST00000323926 GSTM3P21266 225 aa12.51□□□□□ -0.41
FN1-201ENST00000323926 RGS8P57771 180 aaPredicted RBP12.51□□□□□ -0.41
FN1-201ENST00000323926 TRAM1Q15629 374 aa12.51□□□□□ -0.41
FN1-201ENST00000323926 OLFML2AQ68BL7 652 aa12.51□□□□□ -0.41
FN1-201ENST00000323926 DNAJA4Q8WW22 397 aaPredicted RBP12.51□□□□□ -0.41
FN1-201ENST00000323926 FEM1CQ96JP0 617 aa12.51□□□□□ -0.41
FN1-201ENST00000323926 FERD3LQ96RJ6 166 aa12.51□□□□□ -0.41
FN1-201ENST00000323926 DGCR6LQ9BY27 220 aa12.51□□□□□ -0.41
FN1-201ENST00000323926 ADAM33Q9BZ11 813 aa12.51□□□□□ -0.41
FN1-201ENST00000323926 ZCWPW1Q9H0M4 648 aa12.51□□□□□ -0.41
FN1-201ENST00000323926 NEUROD4Q9HD90 331 aa12.51□□□□□ -0.41
FN1-201ENST00000323926 DDTLA6NHG4 134 aaPredicted RBP12.5□□□□□ -0.41
FN1-201ENST00000323926 SELPP16109 830 aa12.5□□□□□ -0.41
FN1-201ENST00000323926 RBM34P42696 430 aaKnown RBP12.5□□□□□ -0.41
FN1-201ENST00000323926 CASP5P51878 434 aa12.5□□□□□ -0.41
FN1-201ENST00000323926 GPR33Q49SQ1 333 aa12.5□□□□□ -0.41
FN1-201ENST00000323926 ERMAPQ96PL5 475 aaPredicted RBP12.5□□□□□ -0.41
FN1-201ENST00000323926 P2RX7Q99572 595 aaKnown RBP12.5□□□□□ -0.41
FN1-201ENST00000323926 HSD17B14Q9BPX1 270 aa12.5□□□□□ -0.41
FN1-201ENST00000323926 ZSCAN5AQ9BUG6 496 aa12.5□□□□□ -0.41
FN1-201ENST00000323926 TMEM109Q9BVC6 243 aa12.5□□□□□ -0.41
FN1-201ENST00000323926 SMPD3Q9NY59 655 aaPredicted RBP12.5□□□□□ -0.41
FN1-201ENST00000323926 COG5Q9UP83 839 aa12.5□□□□□ -0.41
FN1-201ENST00000323926 BAIAP2Q9UQB8 552 aa12.5□□□□□ -0.41
FN1-201ENST00000323926 NR2E1Q9Y466 385 aa12.5□□□□□ -0.41
FN1-201ENST00000323926 ANPEPP15144 967 aa12.5□□□□□ -0.41
FN1-201ENST00000323926 MC4RP32245 332 aa12.5□□□□□ -0.41
FN1-201ENST00000323926 SLC9B1Q4ZJI4 515 aa12.5□□□□□ -0.41
FN1-201ENST00000323926 ZC3H12AQ5D1E8 599 aaKnown RBP12.5□□□□□ -0.41
FN1-201ENST00000323926 RD3Q7Z3Z2 195 aa12.5□□□□□ -0.41
FN1-201ENST00000323926 PIF1Q9H611 641 aa12.5□□□□□ -0.41
FN1-201ENST00000323926 CD248Q9HCU0 757 aa12.5□□□□□ -0.41
FN1-201ENST00000323926 ZNF208O43345 1280 aa12.5□□□□□ -0.41
FN1-201ENST00000323926 KAT7O95251 611 aa12.5□□□□□ -0.41
FN1-201ENST00000323926 BMPR2Q13873 1038 aa12.5□□□□□ -0.41
FN1-201ENST00000323926 HIST1H2AAQ96QV6 131 aa12.5□□□□□ -0.41
FN1-201ENST00000323926 TCF25Q9BQ70 676 aa12.5□□□□□ -0.41
FN1-201ENST00000323926 AARSD1Q9BTE6 412 aaKnown RBP12.5□□□□□ -0.41
FN1-201ENST00000323926 GLOD4Q9HC38 313 aa12.5□□□□□ -0.41
FN1-201ENST00000323926 ZFP14Q9HCL3 533 aa12.5□□□□□ -0.41
FN1-201ENST00000323926 STOX2Q9P2F5 926 aaPredicted RBP12.5□□□□□ -0.41
FN1-201ENST00000323926 TRIM17Q9Y577 477 aa12.5□□□□□ -0.41
FN1-201ENST00000323926 CD247P20963 164 aa12.5□□□□□ -0.41
FN1-201ENST00000323926 MTHFRP42898 656 aa12.5□□□□□ -0.41
FN1-201ENST00000323926 CCR8P51685 355 aa12.5□□□□□ -0.41
FN1-201ENST00000323926 ATP1A4Q13733 1029 aa12.5□□□□□ -0.41
FN1-201ENST00000323926 HERC3Q15034 1050 aa12.5□□□□□ -0.41
FN1-201ENST00000323926 OXR1Q8N573 874 aa12.5□□□□□ -0.41
FN1-201ENST00000323926 ANKRD31Q8N7Z5 1873 aa12.5□□□□□ -0.41
FN1-201ENST00000323926 TNFRSF10BO14763 440 aa12.5□□□□□ -0.41
FN1-201ENST00000323926 DHX15O43143 795 aaKnown RBP12.5□□□□□ -0.41
FN1-201ENST00000323926 PRAMEF12O95522 483 aa12.5□□□□□ -0.41
FN1-201ENST00000323926 VGLL2Q8N8G2 317 aa12.5□□□□□ -0.41
FN1-201ENST00000323926 INO80EQ8NBZ0 244 aaPredicted RBP12.5□□□□□ -0.41
FN1-201ENST00000323926 RFT1Q96AA3 541 aa12.5□□□□□ -0.41
FN1-201ENST00000323926 CNTNAP1P78357 1384 aa12.5□□□□□ -0.41
FN1-201ENST00000323926 MAP3K6O95382 1288 aa12.5□□□□□ -0.41
FN1-201ENST00000323926 SMAD3P84022 425 aaKnown RBP12.5□□□□□ -0.41
FN1-201ENST00000323926 ADNP2Q6IQ32 1131 aa12.5□□□□□ -0.41
FN1-201ENST00000323926 GRHL2Q6ISB3 625 aa12.5□□□□□ -0.41
FN1-201ENST00000323926 BPIFB6Q8NFQ5 453 aa12.5□□□□□ -0.41
FN1-201ENST00000323926 CDCA5Q96FF9 252 aa12.5□□□□□ -0.41
FN1-201ENST00000323926 PGLYRP2Q96PD5 576 aa12.5□□□□□ -0.41
FN1-201ENST00000323926 PCDH12Q9NPG4 1184 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms