RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 SPPL2AQ8TCT8 520 aa15.12■□□□□ 0.01
VARS2-201ENST00000321897 PPP1R14BQ96C90 147 aa15.12■□□□□ 0.01
VARS2-201ENST00000321897 BTN2A3PQ96KV6 586 aa15.12■□□□□ 0.01
VARS2-201ENST00000321897 HEPHQ9BQS7 1158 aa15.12■□□□□ 0.01
VARS2-201ENST00000321897 TPK1Q9H3S4 243 aa15.12■□□□□ 0.01
VARS2-201ENST00000321897 FAIMQ9NVQ4 179 aa15.12■□□□□ 0.01
VARS2-201ENST00000321897 FLRT1Q9NZU1 646 aa15.12■□□□□ 0.01
VARS2-201ENST00000321897 JUNP05412 331 aaKnown RBP15.12■□□□□ 0.01
VARS2-201ENST00000321897 HOXD12P35452 270 aa15.12■□□□□ 0.01
VARS2-201ENST00000321897 TTLL9Q3SXZ7 439 aa15.12■□□□□ 0.01
VARS2-201ENST00000321897 SMYD5Q6GMV2 418 aa15.12■□□□□ 0.01
VARS2-201ENST00000321897 RETSATQ6NUM9 610 aa15.12■□□□□ 0.01
VARS2-201ENST00000321897 PROX1Q92786 737 aa15.12■□□□□ 0.01
VARS2-201ENST00000321897 INVSQ9Y283 1065 aa15.12■□□□□ 0.01
VARS2-201ENST00000321897 A8MV72 311 aaPredicted RBP15.12■□□□□ 0.01
VARS2-201ENST00000321897 CYP2C18P33260 490 aa15.12■□□□□ 0.01
VARS2-201ENST00000321897 GPRIN3Q6ZVF9 776 aa15.12■□□□□ 0.01
VARS2-201ENST00000321897 SLC24A5Q71RS6 500 aa15.12■□□□□ 0.01
VARS2-201ENST00000321897 ADGRG6Q86SQ4 1221 aa15.12■□□□□ 0.01
VARS2-201ENST00000321897 STX19Q8N4C7 294 aa15.12■□□□□ 0.01
VARS2-201ENST00000321897 METTL25Q8N6Q8 603 aa15.12■□□□□ 0.01
VARS2-201ENST00000321897 PHF21AQ96BD5 680 aa15.12■□□□□ 0.01
VARS2-201ENST00000321897 TMEM74Q96NL1 305 aa15.12■□□□□ 0.01
VARS2-201ENST00000321897 CORO1BQ9BR76 489 aa15.12■□□□□ 0.01
VARS2-201ENST00000321897 MARCH4Q9P2E8 410 aaPredicted RBP15.12■□□□□ 0.01
VARS2-201ENST00000321897 HCSTQ9UBK5 93 aa15.12■□□□□ 0.01
VARS2-201ENST00000321897 CCND3P30281 292 aaPredicted RBP15.12■□□□□ 0.01
VARS2-201ENST00000321897 ALDH9A1P49189 494 aa15.12■□□□□ 0.01
VARS2-201ENST00000321897 HMGCS1Q01581 520 aa15.12■□□□□ 0.01
VARS2-201ENST00000321897 TNK2Q07912 1038 aa15.12■□□□□ 0.01
VARS2-201ENST00000321897 DOK6Q6PKX4 331 aa15.12■□□□□ 0.01
VARS2-201ENST00000321897 GDAP2Q9NXN4 497 aa15.12■□□□□ 0.01
VARS2-201ENST00000321897 PGAP2Q9UHJ9 254 aa15.12■□□□□ 0.01
VARS2-201ENST00000321897 PCDHGB5Q9Y5G0 923 aa15.12■□□□□ 0.01
VARS2-201ENST00000321897 CROCCQ5TZA2 2017 aa15.11■□□□□ 0.01
VARS2-201ENST00000321897 CENPXA8MT69 81 aa15.11■□□□□ 0.01
VARS2-201ENST00000321897 TRIM24O15164 1050 aa15.11■□□□□ 0.01
VARS2-201ENST00000321897 GPR39O43194 453 aa15.11■□□□□ 0.01
VARS2-201ENST00000321897 FAM189A1O60320 539 aa15.11■□□□□ 0.01
VARS2-201ENST00000321897 BCAS2O75934 225 aaPredicted RBP15.11■□□□□ 0.01
VARS2-201ENST00000321897 GNAO1P09471 354 aa15.11■□□□□ 0.01
VARS2-201ENST00000321897 ELK4P28324 431 aa15.11■□□□□ 0.01
VARS2-201ENST00000321897 SLC7A1P30825 629 aa15.11■□□□□ 0.01
VARS2-201ENST00000321897 RFX3P48380 749 aa15.11■□□□□ 0.01
VARS2-201ENST00000321897 LIPEQ05469 1076 aa15.11■□□□□ 0.01
VARS2-201ENST00000321897 ABRQ12979 859 aa15.11■□□□□ 0.01
VARS2-201ENST00000321897 RAB39AQ14964 217 aa15.11■□□□□ 0.01
VARS2-201ENST00000321897 SPDYE7PQ495Y7 208 aa15.11■□□□□ 0.01
VARS2-201ENST00000321897 UGT3A1Q6NUS8 523 aa15.11■□□□□ 0.01
VARS2-201ENST00000321897 TTC23LQ6PF05 361 aa15.11■□□□□ 0.01
VARS2-201ENST00000321897 EPGNQ6UW88 154 aa15.11■□□□□ 0.01
VARS2-201ENST00000321897 TMCO2Q7Z6W1 182 aaPredicted RBP15.11■□□□□ 0.01
VARS2-201ENST00000321897 ZNF366Q8N895 744 aa15.11■□□□□ 0.01
VARS2-201ENST00000321897 ARL14EPQ8N8R7 260 aaPredicted RBP15.11■□□□□ 0.01
VARS2-201ENST00000321897 CENPNQ96H22 339 aaPredicted RBP15.11■□□□□ 0.01
VARS2-201ENST00000321897 OSGEPL1Q9H4B0 414 aa15.11■□□□□ 0.01
VARS2-201ENST00000321897 TRPV5Q9NQA5 729 aa15.11■□□□□ 0.01
VARS2-201ENST00000321897 GTF2IRD1Q9UHL9 959 aa15.11■□□□□ 0.01
VARS2-201ENST00000321897 MICAL3Q7RTP6 2002 aa15.11■□□□□ 0.01
VARS2-201ENST00000321897 NHSL1Q5SYE7 1610 aa15.11■□□□□ 0.01
VARS2-201ENST00000321897 SCAMP1O15126 338 aa15.11■□□□□ 0.01
VARS2-201ENST00000321897 CD68P34810 354 aaPredicted RBP15.11■□□□□ 0.01
VARS2-201ENST00000321897 DGKQP52824 942 aa15.11■□□□□ 0.01
VARS2-201ENST00000321897 CLCQ05315 142 aa15.11■□□□□ 0.01
VARS2-201ENST00000321897 MAPKAPK3Q16644 382 aa15.11■□□□□ 0.01
VARS2-201ENST00000321897 SIRPB2Q5JXA9 342 aa15.11■□□□□ 0.01
VARS2-201ENST00000321897 GLYATQ6IB77 296 aa15.11■□□□□ 0.01
VARS2-201ENST00000321897 ARNTL2Q8WYA1 636 aa15.11■□□□□ 0.01
VARS2-201ENST00000321897 ASB9Q96DX5 294 aa15.11■□□□□ 0.01
VARS2-201ENST00000321897 HMX1Q9NP08 348 aaPredicted RBP15.11■□□□□ 0.01
VARS2-201ENST00000321897 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.11■□□□□ 0.01
VARS2-201ENST00000321897 USE1Q9NZ43 259 aa15.11■□□□□ 0.01
VARS2-201ENST00000321897 DNAJC25-GNG10A0A024R161 153 aa15.11■□□□□ 0.01
VARS2-201ENST00000321897 PCP4L1A6NKN8 68 aa15.11■□□□□ 0.01
VARS2-201ENST00000321897 H7C4K7 107 aa15.11■□□□□ 0.01
VARS2-201ENST00000321897 GABBR2O75899 941 aa15.11■□□□□ 0.01
VARS2-201ENST00000321897 PRIM2P49643 509 aa15.11■□□□□ 0.01
VARS2-201ENST00000321897 AGTR2P50052 363 aa15.11■□□□□ 0.01
VARS2-201ENST00000321897 CLCN2P51788 898 aa15.11■□□□□ 0.01
VARS2-201ENST00000321897 RHDQ02161 417 aa15.11■□□□□ 0.01
VARS2-201ENST00000321897 SP3Q02447 781 aa15.11■□□□□ 0.01
VARS2-201ENST00000321897 TRIP4Q15650 581 aaPredicted RBP15.11■□□□□ 0.01
VARS2-201ENST00000321897 SYT16Q17RD7 645 aa15.11■□□□□ 0.01
VARS2-201ENST00000321897 RABL3Q5HYI8 236 aa15.11■□□□□ 0.01
VARS2-201ENST00000321897 RAVER1Q8IY67 606 aaKnown RBP15.11■□□□□ 0.01
VARS2-201ENST00000321897 PSD4Q8NDX1 1056 aa15.11■□□□□ 0.01
VARS2-201ENST00000321897 SLC9A7Q96T83 725 aa15.11■□□□□ 0.01
VARS2-201ENST00000321897 ADAMTSL1Q8N6G6 1762 aa15.11■□□□□ 0.01
VARS2-201ENST00000321897 PPP6CO00743 305 aa15.1■□□□□ 0.01
VARS2-201ENST00000321897 LZTS3O60299 673 aaPredicted RBP15.1■□□□□ 0.01
VARS2-201ENST00000321897 EPHB3P54753 998 aa15.1■□□□□ 0.01
VARS2-201ENST00000321897 MLLT6P55198 1093 aaPredicted RBP15.1■□□□□ 0.01
VARS2-201ENST00000321897 HNRNPDQ14103 355 aaKnown RBP15.1■□□□□ 0.01
VARS2-201ENST00000321897 GRB14Q14449 540 aa15.1■□□□□ 0.01
VARS2-201ENST00000321897 SLC22A16Q86VW1 577 aa15.1■□□□□ 0.01
VARS2-201ENST00000321897 FIBCD1Q8N539 461 aa15.1■□□□□ 0.01
VARS2-201ENST00000321897 SLC15A4Q8N697 577 aa15.1■□□□□ 0.01
VARS2-201ENST00000321897 FEM1CQ96JP0 617 aa15.1■□□□□ 0.01
VARS2-201ENST00000321897 DEFB118Q96PH6 123 aa15.1■□□□□ 0.01
VARS2-201ENST00000321897 NAA50Q9GZZ1 169 aaKnown RBP15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms