RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 PIRTP0C851 137 aa13.31□□□□□ -0.28
SKA3-202ENST00000314759 CDH1P12830 882 aa13.31□□□□□ -0.28
SKA3-202ENST00000314759 BRCC3P46736 316 aa13.31□□□□□ -0.28
SKA3-202ENST00000314759 DNASE1L3Q13609 305 aa13.31□□□□□ -0.28
SKA3-202ENST00000314759 DAG1Q14118 895 aa13.31□□□□□ -0.28
SKA3-202ENST00000314759 TSNQ15631 228 aaKnown RBP13.31□□□□□ -0.28
SKA3-202ENST00000314759 KCNJ8Q15842 424 aa13.31□□□□□ -0.28
SKA3-202ENST00000314759 ALFQ53S48 1182 aa13.31□□□□□ -0.28
SKA3-202ENST00000314759 UGT3A1Q6NUS8 523 aa13.31□□□□□ -0.28
SKA3-202ENST00000314759 STK32CQ86UX6 486 aa13.31□□□□□ -0.28
SKA3-202ENST00000314759 HID1Q8IV36 788 aa13.31□□□□□ -0.28
SKA3-202ENST00000314759 DTWD1Q8N5C7 304 aa13.31□□□□□ -0.28
SKA3-202ENST00000314759 SLC22A17Q8WUG5 538 aa13.31□□□□□ -0.28
SKA3-202ENST00000314759 ADARB2Q9NS39 739 aaKnown RBP13.31□□□□□ -0.28
SKA3-202ENST00000314759 FAM105AQ9NUU6 356 aa13.31□□□□□ -0.28
SKA3-202ENST00000314759 ITGB1BP2Q9UKP3 347 aa13.31□□□□□ -0.28
SKA3-202ENST00000314759 FAM50BQ9Y247 325 aa13.31□□□□□ -0.28
SKA3-202ENST00000314759 MED16Q9Y2X0 877 aa13.31□□□□□ -0.28
SKA3-202ENST00000314759 NCF1BA6NI72 391 aaPredicted RBP13.31□□□□□ -0.28
SKA3-202ENST00000314759 NCF1CA8MVU1 366 aaPredicted RBP13.31□□□□□ -0.28
SKA3-202ENST00000314759 KDM1AO60341 852 aa13.31□□□□□ -0.28
SKA3-202ENST00000314759 SNX2O60749 519 aa13.31□□□□□ -0.28
SKA3-202ENST00000314759 BCAS1O75363 584 aaPredicted RBP13.31□□□□□ -0.28
SKA3-202ENST00000314759 THRBP10828 461 aa13.31□□□□□ -0.28
SKA3-202ENST00000314759 NCF1P14598 390 aaPredicted RBP13.31□□□□□ -0.28
SKA3-202ENST00000314759 IL7RP16871 459 aa13.31□□□□□ -0.28
SKA3-202ENST00000314759 HOXB8P17481 243 aaPredicted RBP13.31□□□□□ -0.28
SKA3-202ENST00000314759 PSEN2P49810 448 aa13.31□□□□□ -0.28
SKA3-202ENST00000314759 SELPLGQ14242 412 aa13.31□□□□□ -0.28
SKA3-202ENST00000314759 PGS1Q32NB8 556 aa13.31□□□□□ -0.28
SKA3-202ENST00000314759 C6orf183Q5T699 404 aa13.31□□□□□ -0.28
SKA3-202ENST00000314759 THAP5Q7Z6K1 395 aa13.31□□□□□ -0.28
SKA3-202ENST00000314759 SPARTQ8N0X7 666 aa13.31□□□□□ -0.28
SKA3-202ENST00000314759 CLEC4FQ8N1N0 589 aa13.31□□□□□ -0.28
SKA3-202ENST00000314759 STARD8Q92502 1023 aa13.31□□□□□ -0.28
SKA3-202ENST00000314759 ZNF347Q96SE7 839 aa13.31□□□□□ -0.28
SKA3-202ENST00000314759 SP110Q9HB58 689 aa13.31□□□□□ -0.28
SKA3-202ENST00000314759 CDC7O00311 574 aa13.3□□□□□ -0.28
SKA3-202ENST00000314759 STC1P52823 247 aa13.3□□□□□ -0.28
SKA3-202ENST00000314759 NRG1Q02297 640 aaPredicted RBP13.3□□□□□ -0.28
SKA3-202ENST00000314759 DLEU7Q6UYE1 221 aa13.3□□□□□ -0.28
SKA3-202ENST00000314759 GPR142Q7Z601 462 aa13.3□□□□□ -0.28
SKA3-202ENST00000314759 DSG4Q86SJ6 1040 aa13.3□□□□□ -0.28
SKA3-202ENST00000314759 TEX26Q8N6G2 289 aa13.3□□□□□ -0.28
SKA3-202ENST00000314759 OR4L1Q8NH43 312 aa13.3□□□□□ -0.28
SKA3-202ENST00000314759 NPLOC4Q8TAT6 608 aa13.3□□□□□ -0.28
SKA3-202ENST00000314759 HASPINQ8TF76 798 aa13.3□□□□□ -0.28
SKA3-202ENST00000314759 FUBP1Q96AE4 644 aaKnown RBP13.3□□□□□ -0.28
SKA3-202ENST00000314759 NRBF2Q96F24 287 aa13.3□□□□□ -0.28
SKA3-202ENST00000314759 C1orf74Q96LT6 269 aa13.3□□□□□ -0.28
SKA3-202ENST00000314759 BEGAINQ9BUH8 593 aa13.3□□□□□ -0.28
SKA3-202ENST00000314759 DERL2Q9GZP9 239 aa13.3□□□□□ -0.28
SKA3-202ENST00000314759 SEPT3Q9UH03 358 aa13.3□□□□□ -0.28
SKA3-202ENST00000314759 SUN2Q9UH99 717 aa13.3□□□□□ -0.28
SKA3-202ENST00000314759 EVLQ9UI08 416 aaPredicted RBP13.3□□□□□ -0.28
SKA3-202ENST00000314759 PCDHB3Q9Y5E6 796 aa13.3□□□□□ -0.28
SKA3-202ENST00000314759 CEP350Q5VT06 3117 aa13.3□□□□□ -0.28
SKA3-202ENST00000314759 A0A1W2PQH9 124 aa13.3□□□□□ -0.28
SKA3-202ENST00000314759 FAM234BA2RU67 622 aa13.3□□□□□ -0.28
SKA3-202ENST00000314759 TNFRSF10BO14763 440 aa13.3□□□□□ -0.28
SKA3-202ENST00000314759 DEAF1O75398 565 aaPredicted RBP13.3□□□□□ -0.28
SKA3-202ENST00000314759 B3GAT3O94766 335 aa13.3□□□□□ -0.28
SKA3-202ENST00000314759 ODC1P11926 461 aa13.3□□□□□ -0.28
SKA3-202ENST00000314759 GSTM2P28161 218 aa13.3□□□□□ -0.28
SKA3-202ENST00000314759 MTPNP58546 118 aa13.3□□□□□ -0.28
SKA3-202ENST00000314759 ERVK-8P63133 956 aa13.3□□□□□ -0.28
SKA3-202ENST00000314759 HABP4Q5JVS0 413 aaKnown RBP13.3□□□□□ -0.28
SKA3-202ENST00000314759 MSANTD2Q6P1R3 559 aa13.3□□□□□ -0.28
SKA3-202ENST00000314759 TAF2Q6P1X5 1199 aa13.3□□□□□ -0.28
SKA3-202ENST00000314759 ZNF683Q8IZ20 524 aa13.3□□□□□ -0.28
SKA3-202ENST00000314759 DCBLD1Q8N8Z6 715 aa13.3□□□□□ -0.28
SKA3-202ENST00000314759 PDZD8Q8NEN9 1154 aa13.3□□□□□ -0.28
SKA3-202ENST00000314759 NUDT8Q8WV74 236 aa13.3□□□□□ -0.28
SKA3-202ENST00000314759 FATE1Q969F0 183 aa13.3□□□□□ -0.28
SKA3-202ENST00000314759 ESAMQ96AP7 390 aa13.3□□□□□ -0.28
SKA3-202ENST00000314759 FKBP10Q96AY3 582 aa13.3□□□□□ -0.28
SKA3-202ENST00000314759 PPM1MQ96MI6 270 aa13.3□□□□□ -0.28
SKA3-202ENST00000314759 FUNDC2Q9BWH2 189 aa13.3□□□□□ -0.28
SKA3-202ENST00000314759 TOR3AQ9H497 397 aa13.3□□□□□ -0.28
SKA3-202ENST00000314759 CATSPERZQ9NTU4 200 aa13.3□□□□□ -0.28
SKA3-202ENST00000314759 FNIP2Q9P278 1114 aa13.3□□□□□ -0.28
SKA3-202ENST00000314759 GALPQ9UBC7 116 aa13.3□□□□□ -0.28
SKA3-202ENST00000314759 WARS2Q9UGM6 360 aaKnown RBP13.3□□□□□ -0.28
SKA3-202ENST00000314759 PCDHGA8Q9Y5G5 932 aa13.3□□□□□ -0.28
SKA3-202ENST00000314759 UBA6A0AVT1 1052 aaPredicted RBP13.29□□□□□ -0.28
SKA3-202ENST00000314759 CLDN25C9JDP6 229 aa13.29□□□□□ -0.28
SKA3-202ENST00000314759 RPP40O75818 363 aaKnown RBP13.29□□□□□ -0.28
SKA3-202ENST00000314759 RHOBTB1O94844 696 aa13.29□□□□□ -0.28
SKA3-202ENST00000314759 HTR1AP08908 422 aa13.29□□□□□ -0.28
SKA3-202ENST00000314759 UROSP10746 265 aa13.29□□□□□ -0.28
SKA3-202ENST00000314759 YWHAHQ04917 246 aaPredicted RBP13.29□□□□□ -0.28
SKA3-202ENST00000314759 GALNT3Q14435 633 aa13.29□□□□□ -0.28
SKA3-202ENST00000314759 INAVAQ3KP66 663 aa13.29□□□□□ -0.28
SKA3-202ENST00000314759 C6orf136Q5SQH8 315 aa13.29□□□□□ -0.28
SKA3-202ENST00000314759 CCDC80Q76M96 950 aa13.29□□□□□ -0.28
SKA3-202ENST00000314759 CCDC138Q96M89 665 aa13.29□□□□□ -0.28
SKA3-202ENST00000314759 NUSAP1Q9BXS6 441 aaKnown RBP13.29□□□□□ -0.28
SKA3-202ENST00000314759 DGCR6LQ9BY27 220 aa13.29□□□□□ -0.28
SKA3-202ENST00000314759 SIAEQ9HAT2 523 aa13.29□□□□□ -0.28
SKA3-202ENST00000314759 HPS4Q9NQG7 708 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms