RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 MYO18BQ8IUG5 2567 aa4.91□□□□□ -1.62
CKS1B-201ENST00000308987 A0A087X1B8 175 aa4.91□□□□□ -1.62
CKS1B-201ENST00000308987 A0A0G2JND7 137 aa4.91□□□□□ -1.62
CKS1B-201ENST00000308987 TCRBV9S1A1TA0A576 114 aa4.91□□□□□ -1.62
CKS1B-201ENST00000308987 DPPA5A6NC42 116 aa4.91□□□□□ -1.62
CKS1B-201ENST00000308987 C2orf78A6NCI8 922 aa4.91□□□□□ -1.62
CKS1B-201ENST00000308987 FAM159BA6NKW6 160 aa4.91□□□□□ -1.62
CKS1B-201ENST00000308987 K7EQS6 105 aa4.91□□□□□ -1.62
CKS1B-201ENST00000308987 CYB561D2O14569 222 aa4.91□□□□□ -1.62
CKS1B-201ENST00000308987 SNNO75324 88 aaPredicted RBP4.91□□□□□ -1.62
CKS1B-201ENST00000308987 ENTPD5O75356 428 aa4.91□□□□□ -1.62
CKS1B-201ENST00000308987 CIB2O75838 187 aa4.91□□□□□ -1.62
CKS1B-201ENST00000308987 TM7SF2O76062 418 aa4.91□□□□□ -1.62
CKS1B-201ENST00000308987 STK10O94804 968 aaKnown RBP4.91□□□□□ -1.62
CKS1B-201ENST00000308987 TMEM63AO94886 807 aa4.91□□□□□ -1.62
CKS1B-201ENST00000308987 KLHL2O95198 593 aa4.91□□□□□ -1.62
CKS1B-201ENST00000308987 CALCAP01258 141 aa4.91□□□□□ -1.62
CKS1B-201ENST00000308987 C1QAP02745 245 aa4.91□□□□□ -1.62
CKS1B-201ENST00000308987 ERBB2P04626 1255 aa4.91□□□□□ -1.62
CKS1B-201ENST00000308987 SERPINA6P08185 405 aa4.91□□□□□ -1.62
CKS1B-201ENST00000308987 SETSIPP0DME0 302 aa4.91□□□□□ -1.62
CKS1B-201ENST00000308987 MYL2P10916 166 aa4.91□□□□□ -1.62
CKS1B-201ENST00000308987 VDRP11473 427 aa4.91□□□□□ -1.62
CKS1B-201ENST00000308987 MLNP12872 115 aa4.91□□□□□ -1.62
CKS1B-201ENST00000308987 P4HA1P13674 534 aa4.91□□□□□ -1.62
CKS1B-201ENST00000308987 TCF4P15884 667 aa4.91□□□□□ -1.62
CKS1B-201ENST00000308987 ZFXP17010 805 aaPredicted RBP4.91□□□□□ -1.62
CKS1B-201ENST00000308987 DESP17661 470 aa4.91□□□□□ -1.62
CKS1B-201ENST00000308987 TPSB2P20231 275 aa4.91□□□□□ -1.62
CKS1B-201ENST00000308987 SERPINB3P29508 390 aa4.91□□□□□ -1.62
CKS1B-201ENST00000308987 PRDX6P30041 224 aa4.91□□□□□ -1.62
CKS1B-201ENST00000308987 CDC25CP30307 473 aa4.91□□□□□ -1.62
CKS1B-201ENST00000308987 CRHR1P34998 444 aa4.91□□□□□ -1.62
CKS1B-201ENST00000308987 RFC1P35251 1148 aaPredicted RBP4.91□□□□□ -1.62
CKS1B-201ENST00000308987 PGM1P36871 562 aa4.91□□□□□ -1.62
CKS1B-201ENST00000308987 OPRD1P41143 372 aa4.91□□□□□ -1.62
CKS1B-201ENST00000308987 ELK3P41970 407 aa4.91□□□□□ -1.62
CKS1B-201ENST00000308987 MAGEA3P43357 314 aa4.91□□□□□ -1.62
CKS1B-201ENST00000308987 SLC6A11P48066 632 aa4.91□□□□□ -1.62
CKS1B-201ENST00000308987 CCNHP51946 323 aaPredicted RBP4.91□□□□□ -1.62
CKS1B-201ENST00000308987 ZNF143P52747 638 aaPredicted RBP4.91□□□□□ -1.62
CKS1B-201ENST00000308987 MYL6P60660 151 aa4.91□□□□□ -1.62
CKS1B-201ENST00000308987 ACTR3P61158 418 aa4.91□□□□□ -1.62
CKS1B-201ENST00000308987 PSMC1P62191 440 aaKnown RBP4.91□□□□□ -1.62
CKS1B-201ENST00000308987 AP2B1P63010 937 aa4.91□□□□□ -1.62
CKS1B-201ENST00000308987 RACK1P63244 317 aaKnown RBP4.91□□□□□ -1.62
CKS1B-201ENST00000308987 MXRA7P84157 204 aa4.91□□□□□ -1.62
CKS1B-201ENST00000308987 GRSF1Q12849 480 aaKnown RBP eCLIP4.91□□□□□ -1.62
CKS1B-201ENST00000308987 DYNC1I2Q13409 638 aaKnown RBP4.91□□□□□ -1.62
CKS1B-201ENST00000308987 HNRNPDQ14103 355 aaKnown RBP4.91□□□□□ -1.62
CKS1B-201ENST00000308987 DMC1Q14565 340 aa4.91□□□□□ -1.62
CKS1B-201ENST00000308987 RBBP5Q15291 538 aaKnown RBP4.91□□□□□ -1.62
CKS1B-201ENST00000308987 RCN1Q15293 331 aa4.91□□□□□ -1.62
CKS1B-201ENST00000308987 TPSAB1Q15661 275 aa4.91□□□□□ -1.62
CKS1B-201ENST00000308987 DDR2Q16832 855 aa4.91□□□□□ -1.62
CKS1B-201ENST00000308987 INSCQ1MX18 579 aa4.91□□□□□ -1.62
CKS1B-201ENST00000308987 ZNF699Q32M78 642 aa4.91□□□□□ -1.62
CKS1B-201ENST00000308987 MGAT5BQ3V5L5 792 aa4.91□□□□□ -1.62
CKS1B-201ENST00000308987 PTPN20Q4JDL3 420 aa4.91□□□□□ -1.62
CKS1B-201ENST00000308987 ARHGAP15Q53QZ3 475 aa4.91□□□□□ -1.62
CKS1B-201ENST00000308987 C2CD6Q53TS8 623 aa4.91□□□□□ -1.62
CKS1B-201ENST00000308987 ACSBG2Q5FVE4 666 aa4.91□□□□□ -1.62
CKS1B-201ENST00000308987 STEAP3Q658P3 488 aa4.91□□□□□ -1.62
CKS1B-201ENST00000308987 LMBRD2Q68DH5 695 aaPredicted RBP4.91□□□□□ -1.62
CKS1B-201ENST00000308987 TXNRD3NBQ6F5E7 133 aa4.91□□□□□ -1.62
CKS1B-201ENST00000308987 OR52E8Q6IFG1 317 aa4.91□□□□□ -1.62
CKS1B-201ENST00000308987 DENND1BQ6P3S1 775 aa4.91□□□□□ -1.62
CKS1B-201ENST00000308987 SLC30A9Q6PML9 568 aa4.91□□□□□ -1.62
CKS1B-201ENST00000308987 SYT13Q7L8C5 426 aa4.91□□□□□ -1.62
CKS1B-201ENST00000308987 PHLDB2Q86SQ0 1253 aa4.91□□□□□ -1.62
CKS1B-201ENST00000308987 MON1AQ86VX9 555 aa4.91□□□□□ -1.62
CKS1B-201ENST00000308987 OSTM1Q86WC4 334 aa4.91□□□□□ -1.62
CKS1B-201ENST00000308987 XYLT1Q86Y38 959 aa4.91□□□□□ -1.62
CKS1B-201ENST00000308987 NT5DC4Q86YG4 428 aa4.91□□□□□ -1.62
CKS1B-201ENST00000308987 MYLK4Q86YV6 388 aaPredicted RBP4.91□□□□□ -1.62
CKS1B-201ENST00000308987 RFX6Q8HWS3 928 aa4.91□□□□□ -1.62
CKS1B-201ENST00000308987 CRLF3Q8IUI8 442 aa4.91□□□□□ -1.62
CKS1B-201ENST00000308987 GALNT15Q8N3T1 639 aa4.91□□□□□ -1.62
CKS1B-201ENST00000308987 KLHL36Q8N4N3 616 aa4.91□□□□□ -1.62
CKS1B-201ENST00000308987 CAMKK1Q8N5S9 505 aa4.91□□□□□ -1.62
CKS1B-201ENST00000308987 ARFGAP1Q8N6T3 406 aa4.91□□□□□ -1.62
CKS1B-201ENST00000308987 KCTD6Q8NC69 237 aa4.91□□□□□ -1.62
CKS1B-201ENST00000308987 DEFB124Q8NES8 71 aa4.91□□□□□ -1.62
CKS1B-201ENST00000308987 RFWD2Q8NHY2 731 aa4.91□□□□□ -1.62
CKS1B-201ENST00000308987 JADE3Q92613 823 aa4.91□□□□□ -1.62
CKS1B-201ENST00000308987 SRPK1Q96SB4 655 aaKnown RBP4.91□□□□□ -1.62
CKS1B-201ENST00000308987 TSC22D3Q99576 134 aa4.91□□□□□ -1.62
CKS1B-201ENST00000308987 ZNF184Q99676 751 aaPredicted RBP4.91□□□□□ -1.62
CKS1B-201ENST00000308987 P2RY13Q9BPV8 354 aa4.91□□□□□ -1.62
CKS1B-201ENST00000308987 FAM118BQ9BPY3 351 aa4.91□□□□□ -1.62
CKS1B-201ENST00000308987 WDR83Q9BRX9 315 aaKnown RBP4.91□□□□□ -1.62
CKS1B-201ENST00000308987 NAT9Q9BTE0 207 aa4.91□□□□□ -1.62
CKS1B-201ENST00000308987 SCNM1Q9BWG6 230 aa4.91□□□□□ -1.62
CKS1B-201ENST00000308987 TPSD1Q9BZJ3 242 aa4.91□□□□□ -1.62
CKS1B-201ENST00000308987 SDCBP2Q9H190 292 aa4.91□□□□□ -1.62
CKS1B-201ENST00000308987 USP29Q9HBJ7 922 aa4.91□□□□□ -1.62
CKS1B-201ENST00000308987 XAB2Q9HCS7 855 aaKnown RBP4.91□□□□□ -1.62
CKS1B-201ENST00000308987 ZDHHC4Q9NPG8 344 aa4.91□□□□□ -1.62
CKS1B-201ENST00000308987 FSCN3Q9NQT6 498 aa4.91□□□□□ -1.62
CKS1B-201ENST00000308987 TMEM74BQ9NUR3 256 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms